RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.93■■■□□ 2.7
NXT1-201ENST00000254998 KIF1BO60333 1816 aa31.93■■■□□ 2.7
NXT1-201ENST00000254998 TRIM26Q12899 539 aaPredicted RBP31.92■■■□□ 2.7
NXT1-201ENST00000254998 ZNF335Q9H4Z2 1342 aaPredicted RBP31.91■■■□□ 2.7
NXT1-201ENST00000254998 PLEKHG1Q9ULL1 1385 aa31.89■■■□□ 2.7
NXT1-201ENST00000254998 CCDC144AA2RUR9 1427 aa31.89■■■□□ 2.7
NXT1-201ENST00000254998 CERKQ8TCT0 537 aa31.87■■■□□ 2.69
NXT1-201ENST00000254998 PPP1R15AO75807 674 aaPredicted RBP31.86■■■□□ 2.69
NXT1-201ENST00000254998 ZNF326Q5BKZ1 582 aaKnown RBP31.83■■■□□ 2.69
NXT1-201ENST00000254998 NEXMIFQ5QGS0 1516 aa31.81■■■□□ 2.68
NXT1-201ENST00000254998 ANKRD30BQ9BXX2 1392 aa31.81■■■□□ 2.68
NXT1-201ENST00000254998 CPS1P31327 1500 aa31.8■■■□□ 2.68
NXT1-201ENST00000254998 RPGRIP1LQ68CZ1 1315 aa31.79■■■□□ 2.68
NXT1-201ENST00000254998 SPATA31E1Q6ZUB1 1445 aa31.79■■■□□ 2.68
NXT1-201ENST00000254998 IQSEC2Q5JU85 1478 aa31.78■■■□□ 2.68
NXT1-201ENST00000254998 NUTM2DQ5VT03 806 aaPredicted RBP31.77■■■□□ 2.68
NXT1-201ENST00000254998 SLC26A8Q96RN1 970 aa31.76■■■□□ 2.67
NXT1-201ENST00000254998 BCANQ96GW7 911 aa31.74■■■□□ 2.67
NXT1-201ENST00000254998 ADAMTS13Q76LX8 1427 aa31.74■■■□□ 2.67
NXT1-201ENST00000254998 DIP2AQ14689 1571 aa31.73■■■□□ 2.67
NXT1-201ENST00000254998 TBX22Q9Y458 520 aa31.73■■■□□ 2.67
NXT1-201ENST00000254998 STRCP1A6NGW2 1772 aa31.72■■■□□ 2.67
NXT1-201ENST00000254998 SETBP1Q9Y6X0 1596 aa31.72■■■□□ 2.67
NXT1-201ENST00000254998 PPLO60437 1756 aa31.69■■■□□ 2.66
NXT1-201ENST00000254998 VGFO15240 615 aaPredicted RBP31.69■■■□□ 2.66
NXT1-201ENST00000254998 NRXN3Q9Y4C0 1643 aa31.67■■■□□ 2.66
NXT1-201ENST00000254998 KCNA6P17658 529 aa31.67■■■□□ 2.66
NXT1-201ENST00000254998 NWD1Q149M9 1564 aa31.66■■■□□ 2.66
NXT1-201ENST00000254998 FBXO41Q8TF61 875 aa31.66■■■□□ 2.66
NXT1-201ENST00000254998 PIK3R4Q99570 1358 aa31.66■■■□□ 2.66
NXT1-201ENST00000254998 SENP3Q9H4L4 574 aaPredicted RBP31.64■■■□□ 2.66
NXT1-201ENST00000254998 RGL3Q3MIN7 710 aa31.63■■■□□ 2.65
NXT1-201ENST00000254998 LRRC7Q96NW7 1537 aa31.63■■■□□ 2.65
NXT1-201ENST00000254998 IFT172Q9UG01 1749 aa31.63■■■□□ 2.65
NXT1-201ENST00000254998 CHD2O14647 1828 aaKnown RBP31.61■■■□□ 2.65
NXT1-201ENST00000254998 NKTRP30414 1462 aaKnown RBP31.6■■■□□ 2.65
NXT1-201ENST00000254998 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
NXT1-201ENST00000254998 ADGRF5Q8IZF2 1346 aa31.53■■■□□ 2.64
NXT1-201ENST00000254998 MYOM2P54296 1465 aa31.52■■■□□ 2.64
NXT1-201ENST00000254998 METP08581 1390 aa31.52■■■□□ 2.64
NXT1-201ENST00000254998 DHX57Q6P158 1386 aaKnown RBP31.52■■■□□ 2.64
NXT1-201ENST00000254998 ALKQ9UM73 1620 aa31.52■■■□□ 2.64
NXT1-201ENST00000254998 PTPRUQ92729 1446 aa31.51■■■□□ 2.64
NXT1-201ENST00000254998 SETD1AO15047 1707 aaKnown RBP31.51■■■□□ 2.63
NXT1-201ENST00000254998 NRXN1Q9ULB1 1477 aa31.5■■■□□ 2.63
NXT1-201ENST00000254998 PROSER2Q86WR7 435 aaPredicted RBP31.49■■■□□ 2.63
NXT1-201ENST00000254998 XIRP1Q702N8 1843 aaKnown RBP31.49■■■□□ 2.63
NXT1-201ENST00000254998 PIK3C2GO75747 1445 aa31.49■■■□□ 2.63
NXT1-201ENST00000254998 TMEM94Q12767 1356 aa31.48■■■□□ 2.63
NXT1-201ENST00000254998 XRN1Q8IZH2 1706 aaKnown RBP31.47■■■□□ 2.63
NXT1-201ENST00000254998 STAC3Q96MF2 364 aa31.46■■■□□ 2.63
NXT1-201ENST00000254998 AMOTL2Q9Y2J4 779 aa31.46■■■□□ 2.63
NXT1-201ENST00000254998 NCOA3Q9Y6Q9 1424 aa31.43■■■□□ 2.62
NXT1-201ENST00000254998 UBAP1LF5GYI3 381 aa31.43■■■□□ 2.62
NXT1-201ENST00000254998 PRAG1Q86YV5 1406 aa31.41■■■□□ 2.62
NXT1-201ENST00000254998 TOM1O60784 492 aa31.39■■■□□ 2.62
NXT1-201ENST00000254998 DCAF11Q8TEB1 546 aa31.38■■■□□ 2.61
NXT1-201ENST00000254998 LAMC1P11047 1609 aa31.36■■■□□ 2.61
NXT1-201ENST00000254998 PCGF6Q9BYE7 350 aa31.36■■■□□ 2.61
NXT1-201ENST00000254998 C14orf93Q9H972 538 aaKnown RBP31.36■■■□□ 2.61
NXT1-201ENST00000254998 PTCH1Q13635 1447 aa31.34■■■□□ 2.61
NXT1-201ENST00000254998 RBM33Q96EV2 1170 aaKnown RBP31.34■■■□□ 2.61
NXT1-201ENST00000254998 ASXL1Q8IXJ9 1541 aa31.33■■■□□ 2.61
NXT1-201ENST00000254998 MSH6P52701 1360 aa31.32■■■□□ 2.6
NXT1-201ENST00000254998 KDM2AQ9Y2K7 1162 aa31.32■■■□□ 2.6
NXT1-201ENST00000254998 SIN3AQ96ST3 1273 aa31.31■■■□□ 2.6
NXT1-201ENST00000254998 LRPPRCP42704 1394 aaKnown RBP31.3■■■□□ 2.6
NXT1-201ENST00000254998 CFAP70Q5T0N1 1121 aa31.29■■■□□ 2.6
NXT1-201ENST00000254998 TECPR2O15040 1411 aa31.29■■■□□ 2.6
NXT1-201ENST00000254998 ABCC11Q96J66 1382 aa31.27■■■□□ 2.6
NXT1-201ENST00000254998 ROBO2Q9HCK4 1378 aa31.27■■■□□ 2.6
NXT1-201ENST00000254998 C19orf44Q9H6X5 657 aa31.26■■■□□ 2.59
NXT1-201ENST00000254998 TMEM132EQ6IEE7 984 aa31.25■■■□□ 2.59
NXT1-201ENST00000254998 YTHDC2Q9H6S0 1430 aaKnown RBP31.24■■■□□ 2.59
NXT1-201ENST00000254998 C14orf37Q86TY3 774 aa31.24■■■□□ 2.59
NXT1-201ENST00000254998 KNDC1Q76NI1 1749 aa31.24■■■□□ 2.59
NXT1-201ENST00000254998 DCCP43146 1447 aa31.23■■■□□ 2.59
NXT1-201ENST00000254998 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.22■■■□□ 2.59
NXT1-201ENST00000254998 PIP4K2BP78356 416 aa31.22■■■□□ 2.59
NXT1-201ENST00000254998 NEUROD1Q13562 356 aa31.22■■■□□ 2.59
NXT1-201ENST00000254998 L3MBTL2Q969R5 705 aa31.22■■■□□ 2.59
NXT1-201ENST00000254998 ADGRL3Q9HAR2 1447 aa31.22■■■□□ 2.59
NXT1-201ENST00000254998 ADGRB1O14514 1584 aa31.22■■■□□ 2.59
NXT1-201ENST00000254998 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
NXT1-201ENST00000254998 SIRT1Q96EB6 747 aa31.18■■■□□ 2.58
NXT1-201ENST00000254998 STK26Q9P289 416 aa31.18■■■□□ 2.58
NXT1-201ENST00000254998 SCAF1Q9H7N4 1312 aaKnown RBP31.17■■■□□ 2.58
NXT1-201ENST00000254998 FAM135BQ49AJ0 1406 aa31.16■■■□□ 2.58
NXT1-201ENST00000254998 KIAA1210Q9ULL0 1709 aa31.16■■■□□ 2.58
NXT1-201ENST00000254998 ATF3P18847 181 aa31.16■■■□□ 2.58
NXT1-201ENST00000254998 NALCNQ8IZF0 1738 aa31.15■■■□□ 2.58
NXT1-201ENST00000254998 SLAIN2Q9P270 581 aa31.14■■■□□ 2.58
NXT1-201ENST00000254998 DLC1Q96QB1 1528 aa31.13■■■□□ 2.57
NXT1-201ENST00000254998 CLSPNQ9HAW4 1339 aa31.1■■■□□ 2.57
NXT1-201ENST00000254998 WAPLQ7Z5K2 1190 aa31.08■■■□□ 2.57
NXT1-201ENST00000254998 PLEKHH1Q9ULM0 1364 aa31.06■■■□□ 2.56
NXT1-201ENST00000254998 ROBO1Q9Y6N7 1651 aa31.06■■■□□ 2.56
NXT1-201ENST00000254998 MST1RQ04912 1400 aa31.06■■■□□ 2.56
NXT1-201ENST00000254998 TONSLQ96HA7 1378 aa31.05■■■□□ 2.56
NXT1-201ENST00000254998 CDC42BPGQ6DT37 1551 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms