RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 CHGAP10645 457 aaKnown RBP23.74■■□□□ 1.39
MYOD1-201ENST00000250003 TMEM131LA2VDJ0 1609 aa23.72■■□□□ 1.39
MYOD1-201ENST00000250003 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
MYOD1-201ENST00000250003 DCAF11Q8TEB1 546 aa23.7■■□□□ 1.39
MYOD1-201ENST00000250003 IFT172Q9UG01 1749 aa23.7■■□□□ 1.38
MYOD1-201ENST00000250003 STAG3Q9UJ98 1225 aa23.69■■□□□ 1.38
MYOD1-201ENST00000250003 KDM2AQ9Y2K7 1162 aa23.68■■□□□ 1.38
MYOD1-201ENST00000250003 LTBP4Q8N2S1 1624 aa23.68■■□□□ 1.38
MYOD1-201ENST00000250003 PPLO60437 1756 aa23.67■■□□□ 1.38
MYOD1-201ENST00000250003 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
MYOD1-201ENST00000250003 MED14O60244 1454 aa23.65■■□□□ 1.38
MYOD1-201ENST00000250003 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
MYOD1-201ENST00000250003 LTKP29376 864 aa23.65■■□□□ 1.38
MYOD1-201ENST00000250003 TXNDC2Q86VQ3 553 aa23.65■■□□□ 1.38
MYOD1-201ENST00000250003 NPHP4O75161 1426 aaPredicted RBP23.65■■□□□ 1.38
MYOD1-201ENST00000250003 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.37
MYOD1-201ENST00000250003 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
MYOD1-201ENST00000250003 NEXMIFQ5QGS0 1516 aa23.63■■□□□ 1.37
MYOD1-201ENST00000250003 KDM5AP29375 1690 aaKnown RBP23.63■■□□□ 1.37
MYOD1-201ENST00000250003 EID1Q9Y6B2 187 aa23.62■■□□□ 1.37
MYOD1-201ENST00000250003 PRAG1Q86YV5 1406 aa23.62■■□□□ 1.37
MYOD1-201ENST00000250003 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
MYOD1-201ENST00000250003 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
MYOD1-201ENST00000250003 MYOM2P54296 1465 aa23.61■■□□□ 1.37
MYOD1-201ENST00000250003 SLIT1O75093 1534 aa23.6■■□□□ 1.37
MYOD1-201ENST00000250003 SCAF11Q99590 1463 aaKnown RBP23.59■■□□□ 1.37
MYOD1-201ENST00000250003 TRPM1Q7Z4N2 1603 aa23.57■■□□□ 1.36
MYOD1-201ENST00000250003 RPGRIP1LQ68CZ1 1315 aa23.56■■□□□ 1.36
MYOD1-201ENST00000250003 RALGAPBQ86X10 1494 aa23.55■■□□□ 1.36
MYOD1-201ENST00000250003 NUTM2DQ5VT03 806 aaPredicted RBP23.54■■□□□ 1.36
MYOD1-201ENST00000250003 ADGRF5Q8IZF2 1346 aa23.54■■□□□ 1.36
MYOD1-201ENST00000250003 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
MYOD1-201ENST00000250003 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
MYOD1-201ENST00000250003 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
MYOD1-201ENST00000250003 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
MYOD1-201ENST00000250003 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
MYOD1-201ENST00000250003 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
MYOD1-201ENST00000250003 PIK3C2GO75747 1445 aa23.49■■□□□ 1.35
MYOD1-201ENST00000250003 KIAA1210Q9ULL0 1709 aa23.48■■□□□ 1.35
MYOD1-201ENST00000250003 CPS1P31327 1500 aa23.48■■□□□ 1.35
MYOD1-201ENST00000250003 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
MYOD1-201ENST00000250003 HDGFP51858 240 aaKnown RBP23.47■■□□□ 1.35
MYOD1-201ENST00000250003 ROCK2O75116 1388 aaKnown RBP23.46■■□□□ 1.35
MYOD1-201ENST00000250003 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.34
MYOD1-201ENST00000250003 SLC26A8Q96RN1 970 aa23.45■■□□□ 1.34
MYOD1-201ENST00000250003 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
MYOD1-201ENST00000250003 NBPF1Q3BBV0 1214 aa23.43■■□□□ 1.34
MYOD1-201ENST00000250003 BCANQ96GW7 911 aa23.43■■□□□ 1.34
MYOD1-201ENST00000250003 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
MYOD1-201ENST00000250003 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.42■■□□□ 1.34
MYOD1-201ENST00000250003 LAMC1P11047 1609 aa23.42■■□□□ 1.34
MYOD1-201ENST00000250003 GPRASP1Q5JY77 1395 aa23.41■■□□□ 1.34
MYOD1-201ENST00000250003 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
MYOD1-201ENST00000250003 NRXN3Q9Y4C0 1643 aa23.4■■□□□ 1.34
MYOD1-201ENST00000250003 PLEKHG1Q9ULL1 1385 aa23.38■■□□□ 1.33
MYOD1-201ENST00000250003 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
MYOD1-201ENST00000250003 USP47Q96K76 1375 aa23.37■■□□□ 1.33
MYOD1-201ENST00000250003 LRRC7Q96NW7 1537 aa23.36■■□□□ 1.33
MYOD1-201ENST00000250003 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
MYOD1-201ENST00000250003 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
MYOD1-201ENST00000250003 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
MYOD1-201ENST00000250003 STRCP1A6NGW2 1772 aa23.36■■□□□ 1.33
MYOD1-201ENST00000250003 TOM1O60784 492 aa23.36■■□□□ 1.33
MYOD1-201ENST00000250003 KCNA6P17658 529 aa23.36■■□□□ 1.33
MYOD1-201ENST00000250003 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
MYOD1-201ENST00000250003 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
MYOD1-201ENST00000250003 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
MYOD1-201ENST00000250003 ASXL1Q8IXJ9 1541 aa23.34■■□□□ 1.33
MYOD1-201ENST00000250003 HSPA5P11021 654 aaKnown RBP23.33■■□□□ 1.32
MYOD1-201ENST00000250003 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
MYOD1-201ENST00000250003 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
MYOD1-201ENST00000250003 TMEM132EQ6IEE7 984 aa23.31■■□□□ 1.32
MYOD1-201ENST00000250003 PIP4K2BP78356 416 aa23.3■■□□□ 1.32
MYOD1-201ENST00000250003 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
MYOD1-201ENST00000250003 PROSER2Q86WR7 435 aaPredicted RBP23.28■■□□□ 1.32
MYOD1-201ENST00000250003 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
MYOD1-201ENST00000250003 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
MYOD1-201ENST00000250003 TMEM94Q12767 1356 aa23.25■■□□□ 1.31
MYOD1-201ENST00000250003 ARHGEF28Q8N1W1 1705 aaKnown RBP23.23■■□□□ 1.31
MYOD1-201ENST00000250003 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
MYOD1-201ENST00000250003 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
MYOD1-201ENST00000250003 METP08581 1390 aa23.22■■□□□ 1.31
MYOD1-201ENST00000250003 YTHDC2Q9H6S0 1430 aaKnown RBP23.22■■□□□ 1.31
MYOD1-201ENST00000250003 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
MYOD1-201ENST00000250003 TRAK1Q9UPV9 953 aa23.21■■□□□ 1.31
MYOD1-201ENST00000250003 PIK3R4Q99570 1358 aa23.2■■□□□ 1.3
MYOD1-201ENST00000250003 NKTRP30414 1462 aaKnown RBP23.2■■□□□ 1.3
MYOD1-201ENST00000250003 STK26Q9P289 416 aa23.19■■□□□ 1.3
MYOD1-201ENST00000250003 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
MYOD1-201ENST00000250003 HSPA1LP34931 641 aa23.17■■□□□ 1.3
MYOD1-201ENST00000250003 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
MYOD1-201ENST00000250003 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
MYOD1-201ENST00000250003 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
MYOD1-201ENST00000250003 CHD2O14647 1828 aaKnown RBP23.16■■□□□ 1.3
MYOD1-201ENST00000250003 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
MYOD1-201ENST00000250003 XIRP1Q702N8 1843 aaKnown RBP23.16■■□□□ 1.3
MYOD1-201ENST00000250003 PTPRUQ92729 1446 aa23.13■■□□□ 1.29
MYOD1-201ENST00000250003 TESK2Q96S53 571 aa23.12■■□□□ 1.29
MYOD1-201ENST00000250003 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
MYOD1-201ENST00000250003 DLC1Q96QB1 1528 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms