RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 RSPH4AQ5TD94 716 aa24.15■■□□□ 1.46
CHPF-201ENST00000243776 CDC42BPBQ9Y5S2 1711 aa24.13■■□□□ 1.45
CHPF-201ENST00000243776 ARHGEF5Q12774 1597 aa24.13■■□□□ 1.45
CHPF-201ENST00000243776 ZNF521Q96K83 1311 aa24.13■■□□□ 1.45
CHPF-201ENST00000243776 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
CHPF-201ENST00000243776 PANK1Q8TE04 598 aa24.12■■□□□ 1.45
CHPF-201ENST00000243776 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
CHPF-201ENST00000243776 COG6Q9Y2V7 657 aa24.11■■□□□ 1.45
CHPF-201ENST00000243776 SEC24BO95487 1268 aa24.1■■□□□ 1.45
CHPF-201ENST00000243776 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
CHPF-201ENST00000243776 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.44
CHPF-201ENST00000243776 SLKQ9H2G2 1235 aaPredicted RBP24.07■■□□□ 1.44
CHPF-201ENST00000243776 PRKCSHP14314 528 aaPredicted RBP24.05■■□□□ 1.44
CHPF-201ENST00000243776 AFAP1Q8N556 730 aa24.05■■□□□ 1.44
CHPF-201ENST00000243776 BCL2L13Q9BXK5 485 aa24.05■■□□□ 1.44
CHPF-201ENST00000243776 ARXQ96QS3 562 aa24.05■■□□□ 1.44
CHPF-201ENST00000243776 CFAP70Q5T0N1 1121 aa24.04■■□□□ 1.44
CHPF-201ENST00000243776 TNNQ9UQP3 1299 aa24.03■■□□□ 1.44
CHPF-201ENST00000243776 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
CHPF-201ENST00000243776 INSRP06213 1382 aa24.02■■□□□ 1.44
CHPF-201ENST00000243776 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
CHPF-201ENST00000243776 CDCA8Q53HL2 280 aa24.01■■□□□ 1.43
CHPF-201ENST00000243776 PREX2Q70Z35 1606 aa24.01■■□□□ 1.43
CHPF-201ENST00000243776 TRMT2AQ8IZ69 625 aaKnown RBP24■■□□□ 1.43
CHPF-201ENST00000243776 SPRYD3Q8NCJ5 442 aa24■■□□□ 1.43
CHPF-201ENST00000243776 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
CHPF-201ENST00000243776 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
CHPF-201ENST00000243776 EIF5BO60841 1220 aaKnown RBP23.98■■□□□ 1.43
CHPF-201ENST00000243776 E9PSI1 815 aa23.98■■□□□ 1.43
CHPF-201ENST00000243776 UNC13BO14795 1591 aa23.97■■□□□ 1.43
CHPF-201ENST00000243776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.97■■□□□ 1.43
CHPF-201ENST00000243776 NKTRP30414 1462 aaKnown RBP23.97■■□□□ 1.43
CHPF-201ENST00000243776 CENPJQ9HC77 1338 aaPredicted RBP23.97■■□□□ 1.43
CHPF-201ENST00000243776 POGKQ9P215 609 aa23.96■■□□□ 1.43
CHPF-201ENST00000243776 EIF2AK4Q9P2K8 1649 aaKnown RBP23.96■■□□□ 1.43
CHPF-201ENST00000243776 USP19O94966 1318 aa23.96■■□□□ 1.43
CHPF-201ENST00000243776 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
CHPF-201ENST00000243776 CHGAP10645 457 aaKnown RBP23.94■■□□□ 1.42
CHPF-201ENST00000243776 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
CHPF-201ENST00000243776 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
CHPF-201ENST00000243776 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
CHPF-201ENST00000243776 IQGAP3Q86VI3 1631 aa23.93■■□□□ 1.42
CHPF-201ENST00000243776 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
CHPF-201ENST00000243776 LAMC1P11047 1609 aa23.92■■□□□ 1.42
CHPF-201ENST00000243776 SCAF11Q99590 1463 aaKnown RBP23.92■■□□□ 1.42
CHPF-201ENST00000243776 ADGRF5Q8IZF2 1346 aa23.91■■□□□ 1.42
CHPF-201ENST00000243776 RLBP1P12271 317 aa23.91■■□□□ 1.42
CHPF-201ENST00000243776 EIF3AQ14152 1382 aaKnown RBP23.9■■□□□ 1.42
CHPF-201ENST00000243776 PIK3C2GO75747 1445 aa23.89■■□□□ 1.42
CHPF-201ENST00000243776 KIF3BO15066 747 aa23.89■■□□□ 1.42
CHPF-201ENST00000243776 PCDHB15Q9Y5E8 787 aa23.89■■□□□ 1.41
CHPF-201ENST00000243776 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.41
CHPF-201ENST00000243776 MAST1Q9Y2H9 1570 aa23.87■■□□□ 1.41
CHPF-201ENST00000243776 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
CHPF-201ENST00000243776 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
CHPF-201ENST00000243776 SLC12A5Q9H2X9 1139 aa23.86■■□□□ 1.41
CHPF-201ENST00000243776 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
CHPF-201ENST00000243776 MADDQ8WXG6 1647 aa23.85■■□□□ 1.41
CHPF-201ENST00000243776 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
CHPF-201ENST00000243776 ATP10AO60312 1499 aa23.85■■□□□ 1.41
CHPF-201ENST00000243776 PDE3AQ14432 1141 aa23.84■■□□□ 1.41
CHPF-201ENST00000243776 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
CHPF-201ENST00000243776 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
CHPF-201ENST00000243776 PDZRN3Q9UPQ7 1066 aa23.83■■□□□ 1.4
CHPF-201ENST00000243776 RARSP54136 660 aaKnown RBP23.82■■□□□ 1.4
CHPF-201ENST00000243776 BECN1Q14457 450 aa23.81■■□□□ 1.4
CHPF-201ENST00000243776 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
CHPF-201ENST00000243776 SYNMO15061 1565 aa23.81■■□□□ 1.4
CHPF-201ENST00000243776 NUTM2DQ5VT03 806 aaPredicted RBP23.81■■□□□ 1.4
CHPF-201ENST00000243776 GZF1Q9H116 711 aaPredicted RBP23.8■■□□□ 1.4
CHPF-201ENST00000243776 IQGAP1P46940 1657 aa23.8■■□□□ 1.4
CHPF-201ENST00000243776 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
CHPF-201ENST00000243776 PLXNC1O60486 1568 aa23.79■■□□□ 1.4
CHPF-201ENST00000243776 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
CHPF-201ENST00000243776 MTHFSP49914 203 aa23.77■■□□□ 1.4
CHPF-201ENST00000243776 PLCH2O75038 1416 aa23.77■■□□□ 1.4
CHPF-201ENST00000243776 ERVK-7P63135 1459 aa23.76■■□□□ 1.39
CHPF-201ENST00000243776 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
CHPF-201ENST00000243776 MYOM1P52179 1685 aa23.76■■□□□ 1.39
CHPF-201ENST00000243776 TBC1D2Q9BYX2 928 aa23.76■■□□□ 1.39
CHPF-201ENST00000243776 UPF2Q9HAU5 1272 aaKnown RBP23.75■■□□□ 1.39
CHPF-201ENST00000243776 SAFB2Q14151 953 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHPF-201ENST00000243776 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
CHPF-201ENST00000243776 ABCC2Q92887 1545 aa23.74■■□□□ 1.39
CHPF-201ENST00000243776 RUNDC1Q96C34 613 aa23.74■■□□□ 1.39
CHPF-201ENST00000243776 NSD3Q9BZ95 1437 aa23.74■■□□□ 1.39
CHPF-201ENST00000243776 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
CHPF-201ENST00000243776 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
CHPF-201ENST00000243776 U2AF1L5P0DN76 240 aaPredicted RBP23.73■■□□□ 1.39
CHPF-201ENST00000243776 U2AF1Q01081 240 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHPF-201ENST00000243776 SCAPERQ9BY12 1400 aa23.72■■□□□ 1.39
CHPF-201ENST00000243776 PMFBP1Q8TBY8 1022 aa23.72■■□□□ 1.39
CHPF-201ENST00000243776 MFAP1P55081 439 aaKnown RBP23.72■■□□□ 1.39
CHPF-201ENST00000243776 KDM5AP29375 1690 aaKnown RBP23.69■■□□□ 1.38
CHPF-201ENST00000243776 KANK1Q14678 1352 aa23.69■■□□□ 1.38
CHPF-201ENST00000243776 TRPM2O94759 1503 aa23.69■■□□□ 1.38
CHPF-201ENST00000243776 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
CHPF-201ENST00000243776 TBC1D32Q96NH3 1257 aa23.69■■□□□ 1.38
CHPF-201ENST00000243776 ANTXR1Q9H6X2 564 aa23.68■■□□□ 1.38
CHPF-201ENST00000243776 RWDD1Q9H446 243 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms