RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 APAF1O14727 1248 aa18.49■□□□□ 0.55
LTBP4-202ENST00000243562 LAMC1P11047 1609 aa18.49■□□□□ 0.55
LTBP4-202ENST00000243562 WDR7Q9Y4E6 1490 aa18.49■□□□□ 0.55
LTBP4-202ENST00000243562 MYO5CQ9NQX4 1742 aa18.48■□□□□ 0.55
LTBP4-202ENST00000243562 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
LTBP4-202ENST00000243562 ATP10AO60312 1499 aa18.47■□□□□ 0.55
LTBP4-202ENST00000243562 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
LTBP4-202ENST00000243562 KDM2BQ8NHM5 1336 aa18.46■□□□□ 0.55
LTBP4-202ENST00000243562 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
LTBP4-202ENST00000243562 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
LTBP4-202ENST00000243562 PLCH2O75038 1416 aa18.45■□□□□ 0.54
LTBP4-202ENST00000243562 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
LTBP4-202ENST00000243562 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
LTBP4-202ENST00000243562 ZNF521Q96K83 1311 aa18.43■□□□□ 0.54
LTBP4-202ENST00000243562 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
LTBP4-202ENST00000243562 BCAR3O75815 825 aa18.43■□□□□ 0.54
LTBP4-202ENST00000243562 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LTBP4-202ENST00000243562 CFAP70Q5T0N1 1121 aa18.43■□□□□ 0.54
LTBP4-202ENST00000243562 KIF3BO15066 747 aa18.42■□□□□ 0.54
LTBP4-202ENST00000243562 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
LTBP4-202ENST00000243562 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
LTBP4-202ENST00000243562 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
LTBP4-202ENST00000243562 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
LTBP4-202ENST00000243562 ABCC2Q92887 1545 aa18.4■□□□□ 0.54
LTBP4-202ENST00000243562 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
LTBP4-202ENST00000243562 KANK1Q14678 1352 aa18.39■□□□□ 0.53
LTBP4-202ENST00000243562 E9PSI1 815 aa18.38■□□□□ 0.53
LTBP4-202ENST00000243562 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
LTBP4-202ENST00000243562 C8orf34Q49A92 452 aa18.38■□□□□ 0.53
LTBP4-202ENST00000243562 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
LTBP4-202ENST00000243562 CHGAP10645 457 aaKnown RBP18.38■□□□□ 0.53
LTBP4-202ENST00000243562 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
LTBP4-202ENST00000243562 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
LTBP4-202ENST00000243562 PIK3C2GO75747 1445 aa18.37■□□□□ 0.53
LTBP4-202ENST00000243562 NFKBIBQ15653 356 aa18.37■□□□□ 0.53
LTBP4-202ENST00000243562 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-202ENST00000243562 RNF17Q9BXT8 1623 aaKnown RBP18.36■□□□□ 0.53
LTBP4-202ENST00000243562 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
LTBP4-202ENST00000243562 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
LTBP4-202ENST00000243562 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
LTBP4-202ENST00000243562 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
LTBP4-202ENST00000243562 SCAPERQ9BY12 1400 aa18.34■□□□□ 0.53
LTBP4-202ENST00000243562 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
LTBP4-202ENST00000243562 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
LTBP4-202ENST00000243562 CHD1O14646 1710 aa18.34■□□□□ 0.53
LTBP4-202ENST00000243562 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
LTBP4-202ENST00000243562 SYNMO15061 1565 aa18.33■□□□□ 0.53
LTBP4-202ENST00000243562 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.52
LTBP4-202ENST00000243562 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
LTBP4-202ENST00000243562 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
LTBP4-202ENST00000243562 IGHDP01880 384 aa18.32■□□□□ 0.52
LTBP4-202ENST00000243562 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
LTBP4-202ENST00000243562 ABCC1P33527 1531 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 TRPM2O94759 1503 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 GSE1Q14687 1217 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 RRP7AQ9Y3A4 280 aaKnown RBP18.31■□□□□ 0.52
LTBP4-202ENST00000243562 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
LTBP4-202ENST00000243562 PTPRTO14522 1441 aa18.3■□□□□ 0.52
LTBP4-202ENST00000243562 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
LTBP4-202ENST00000243562 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
LTBP4-202ENST00000243562 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
LTBP4-202ENST00000243562 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
LTBP4-202ENST00000243562 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
LTBP4-202ENST00000243562 PDE3AQ14432 1141 aa18.27■□□□□ 0.51
LTBP4-202ENST00000243562 NGEFQ8N5V2 710 aa18.27■□□□□ 0.51
LTBP4-202ENST00000243562 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.51
LTBP4-202ENST00000243562 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
LTBP4-202ENST00000243562 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
LTBP4-202ENST00000243562 ZCCHC11Q5TAX3 1644 aaKnown RBP18.25■□□□□ 0.51
LTBP4-202ENST00000243562 SPHKAPQ2M3C7 1700 aa18.25■□□□□ 0.51
LTBP4-202ENST00000243562 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
LTBP4-202ENST00000243562 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
LTBP4-202ENST00000243562 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
LTBP4-202ENST00000243562 BCL2L13Q9BXK5 485 aa18.23■□□□□ 0.51
LTBP4-202ENST00000243562 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
LTBP4-202ENST00000243562 TCP11L2Q8N4U5 519 aa18.23■□□□□ 0.51
LTBP4-202ENST00000243562 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
LTBP4-202ENST00000243562 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
LTBP4-202ENST00000243562 CEP152O94986 1710 aa18.22■□□□□ 0.51
LTBP4-202ENST00000243562 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
LTBP4-202ENST00000243562 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
LTBP4-202ENST00000243562 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
LTBP4-202ENST00000243562 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
LTBP4-202ENST00000243562 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
LTBP4-202ENST00000243562 MYOM1P52179 1685 aa18.2■□□□□ 0.5
LTBP4-202ENST00000243562 NSD3Q9BZ95 1437 aa18.2■□□□□ 0.5
LTBP4-202ENST00000243562 FANCAO15360 1455 aa18.19■□□□□ 0.5
LTBP4-202ENST00000243562 POLR3AO14802 1390 aaPredicted RBP18.19■□□□□ 0.5
LTBP4-202ENST00000243562 SEC24BO95487 1268 aa18.19■□□□□ 0.5
LTBP4-202ENST00000243562 MTHFSP49914 203 aa18.19■□□□□ 0.5
LTBP4-202ENST00000243562 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
LTBP4-202ENST00000243562 RARSP54136 660 aaKnown RBP18.18■□□□□ 0.5
LTBP4-202ENST00000243562 TET3O43151 1660 aa18.18■□□□□ 0.5
LTBP4-202ENST00000243562 GGT6Q6P531 493 aa18.18■□□□□ 0.5
LTBP4-202ENST00000243562 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
LTBP4-202ENST00000243562 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
LTBP4-202ENST00000243562 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
LTBP4-202ENST00000243562 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms