RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 STRCP1A6NGW2 1772 aa25.31■■□□□ 1.64
CLTA-201ENST00000242285 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
CLTA-201ENST00000242285 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
CLTA-201ENST00000242285 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
CLTA-201ENST00000242285 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
CLTA-201ENST00000242285 KIF1BO60333 1816 aa25.17■■□□□ 1.62
CLTA-201ENST00000242285 TRPM2O94759 1503 aa25.17■■□□□ 1.62
CLTA-201ENST00000242285 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
CLTA-201ENST00000242285 KCNA6P17658 529 aa25.15■■□□□ 1.62
CLTA-201ENST00000242285 NKTRP30414 1462 aaKnown RBP25.13■■□□□ 1.61
CLTA-201ENST00000242285 HDGFP51858 240 aaKnown RBP25.12■■□□□ 1.61
CLTA-201ENST00000242285 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
CLTA-201ENST00000242285 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
CLTA-201ENST00000242285 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
CLTA-201ENST00000242285 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
CLTA-201ENST00000242285 RIMS2Q9UQ26 1411 aa25.11■■□□□ 1.61
CLTA-201ENST00000242285 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
CLTA-201ENST00000242285 TMEM94Q12767 1356 aa25.08■■□□□ 1.61
CLTA-201ENST00000242285 PLEKHG1Q9ULL1 1385 aa25.08■■□□□ 1.61
CLTA-201ENST00000242285 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.08■■□□□ 1.61
CLTA-201ENST00000242285 CHD2O14647 1828 aaKnown RBP25.07■■□□□ 1.6
CLTA-201ENST00000242285 SETD5Q9C0A6 1442 aa25.05■■□□□ 1.6
CLTA-201ENST00000242285 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
CLTA-201ENST00000242285 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
CLTA-201ENST00000242285 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
CLTA-201ENST00000242285 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
CLTA-201ENST00000242285 CHGAP10645 457 aaKnown RBP25.02■■□□□ 1.6
CLTA-201ENST00000242285 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
CLTA-201ENST00000242285 NCOA3Q9Y6Q9 1424 aa25■■□□□ 1.59
CLTA-201ENST00000242285 PPP1R15AO75807 674 aaPredicted RBP24.99■■□□□ 1.59
CLTA-201ENST00000242285 TBX22Q9Y458 520 aa24.98■■□□□ 1.59
CLTA-201ENST00000242285 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
CLTA-201ENST00000242285 MSH6P52701 1360 aa24.97■■□□□ 1.59
CLTA-201ENST00000242285 BCANQ96GW7 911 aa24.97■■□□□ 1.59
CLTA-201ENST00000242285 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
CLTA-201ENST00000242285 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
CLTA-201ENST00000242285 NRXN3Q9Y4C0 1643 aa24.96■■□□□ 1.59
CLTA-201ENST00000242285 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
CLTA-201ENST00000242285 PPLO60437 1756 aa24.95■■□□□ 1.58
CLTA-201ENST00000242285 MPHOSPH9Q99550 1183 aa24.94■■□□□ 1.58
CLTA-201ENST00000242285 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
CLTA-201ENST00000242285 ROBO1Q9Y6N7 1651 aa24.93■■□□□ 1.58
CLTA-201ENST00000242285 HRCP23327 699 aa24.91■■□□□ 1.58
CLTA-201ENST00000242285 CCDC144AA2RUR9 1427 aa24.88■■□□□ 1.57
CLTA-201ENST00000242285 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
CLTA-201ENST00000242285 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
CLTA-201ENST00000242285 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
CLTA-201ENST00000242285 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
CLTA-201ENST00000242285 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
CLTA-201ENST00000242285 NUTM2DQ5VT03 806 aaPredicted RBP24.85■■□□□ 1.57
CLTA-201ENST00000242285 SETD1AO15047 1707 aaKnown RBP24.85■■□□□ 1.57
CLTA-201ENST00000242285 XRN1Q8IZH2 1706 aaKnown RBP24.85■■□□□ 1.57
CLTA-201ENST00000242285 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
CLTA-201ENST00000242285 FOXD1Q16676 465 aa24.83■■□□□ 1.57
CLTA-201ENST00000242285 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
CLTA-201ENST00000242285 VGFO15240 615 aaPredicted RBP24.81■■□□□ 1.56
CLTA-201ENST00000242285 RGS17Q9UGC6 210 aaPredicted RBP24.81■■□□□ 1.56
CLTA-201ENST00000242285 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
CLTA-201ENST00000242285 C19orf44Q9H6X5 657 aa24.8■■□□□ 1.56
CLTA-201ENST00000242285 JCADQ9P266 1359 aa24.79■■□□□ 1.56
CLTA-201ENST00000242285 DCCP43146 1447 aa24.78■■□□□ 1.56
CLTA-201ENST00000242285 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
CLTA-201ENST00000242285 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
CLTA-201ENST00000242285 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
CLTA-201ENST00000242285 AMOTL2Q9Y2J4 779 aa24.74■■□□□ 1.55
CLTA-201ENST00000242285 ANKRD30BQ9BXX2 1392 aa24.74■■□□□ 1.55
CLTA-201ENST00000242285 COL16A1Q07092 1604 aaPredicted RBP24.74■■□□□ 1.55
CLTA-201ENST00000242285 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
CLTA-201ENST00000242285 AHDC1Q5TGY3 1603 aaPredicted RBP24.73■■□□□ 1.55
CLTA-201ENST00000242285 ATF3P18847 181 aa24.73■■□□□ 1.55
CLTA-201ENST00000242285 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
CLTA-201ENST00000242285 METP08581 1390 aa24.71■■□□□ 1.55
CLTA-201ENST00000242285 SPATA31A6Q5VVP1 1343 aa24.7■■□□□ 1.54
CLTA-201ENST00000242285 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
CLTA-201ENST00000242285 MYOM2P54296 1465 aa24.65■■□□□ 1.54
CLTA-201ENST00000242285 LAMC1P11047 1609 aa24.65■■□□□ 1.54
CLTA-201ENST00000242285 POTEAQ6S8J7 498 aa24.65■■□□□ 1.54
CLTA-201ENST00000242285 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
CLTA-201ENST00000242285 SHPRHQ149N8 1683 aa24.63■■□□□ 1.53
CLTA-201ENST00000242285 PIK3C2GO75747 1445 aa24.63■■□□□ 1.53
CLTA-201ENST00000242285 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
CLTA-201ENST00000242285 KNDC1Q76NI1 1749 aa24.63■■□□□ 1.53
CLTA-201ENST00000242285 NALCNQ8IZF0 1738 aa24.63■■□□□ 1.53
CLTA-201ENST00000242285 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
CLTA-201ENST00000242285 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
CLTA-201ENST00000242285 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
CLTA-201ENST00000242285 MST1RQ04912 1400 aa24.6■■□□□ 1.53
CLTA-201ENST00000242285 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
CLTA-201ENST00000242285 LRP6O75581 1613 aa24.57■■□□□ 1.52
CLTA-201ENST00000242285 TECPR2O15040 1411 aa24.56■■□□□ 1.52
CLTA-201ENST00000242285 ZNF772Q68DY9 489 aaPredicted RBP24.55■■□□□ 1.52
CLTA-201ENST00000242285 STAC3Q96MF2 364 aa24.55■■□□□ 1.52
CLTA-201ENST00000242285 NHSL1Q5SYE7 1610 aa24.54■■□□□ 1.52
CLTA-201ENST00000242285 ROBO2Q9HCK4 1378 aa24.53■■□□□ 1.52
CLTA-201ENST00000242285 MEX3CQ5U5Q3 659 aaKnown RBP24.51■■□□□ 1.51
CLTA-201ENST00000242285 LRPPRCP42704 1394 aaKnown RBP24.51■■□□□ 1.51
CLTA-201ENST00000242285 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
CLTA-201ENST00000242285 C14orf93Q9H972 538 aaKnown RBP24.5■■□□□ 1.51
CLTA-201ENST00000242285 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
CLTA-201ENST00000242285 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms