RNA–Protein interactions for RNA: ENST00000238558.4

GSC-201, Transcript of goosecoid homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSC, Length 1,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSC-201ENST00000238558 TRIM52Q96A61 297 aa39.24■■■■□ 3.87
GSC-201ENST00000238558 BCANQ96GW7 911 aa39.24■■■■□ 3.87
GSC-201ENST00000238558 PPP1R15AO75807 674 aaPredicted RBP39.23■■■■□ 3.87
GSC-201ENST00000238558 PLEKHG1Q9ULL1 1385 aa39.21■■■■□ 3.87
GSC-201ENST00000238558 SPHKAPQ2M3C7 1700 aa39.21■■■■□ 3.87
GSC-201ENST00000238558 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.2■■■■□ 3.87
GSC-201ENST00000238558 SENP3Q9H4L4 574 aaPredicted RBP39.2■■■■□ 3.87
GSC-201ENST00000238558 KCNA6P17658 529 aa39.18■■■■□ 3.86
GSC-201ENST00000238558 PIP4K2BP78356 416 aa39.18■■■■□ 3.86
GSC-201ENST00000238558 NUTM2DQ5VT03 806 aaPredicted RBP39.16■■■■□ 3.86
GSC-201ENST00000238558 SCAF1Q9H7N4 1312 aaKnown RBP39.15■■■■□ 3.86
GSC-201ENST00000238558 ALKQ9UM73 1620 aa39.12■■■■□ 3.85
GSC-201ENST00000238558 SLC4A1APQ9BWU0 796 aaKnown RBP39.1■■■■□ 3.85
GSC-201ENST00000238558 TRPM2O94759 1503 aa39.09■■■■□ 3.85
GSC-201ENST00000238558 TBX22Q9Y458 520 aa39.07■■■■□ 3.85
GSC-201ENST00000238558 XIRP1Q702N8 1843 aaKnown RBP39.06■■■■□ 3.84
GSC-201ENST00000238558 CLTCL1P53675 1640 aa39.05■■■■□ 3.84
GSC-201ENST00000238558 TMEM94Q12767 1356 aa39.04■■■■□ 3.84
GSC-201ENST00000238558 NWD1Q149M9 1564 aa39.04■■■■□ 3.84
GSC-201ENST00000238558 ZNF326Q5BKZ1 582 aaKnown RBP39.03■■■■□ 3.84
GSC-201ENST00000238558 PROSER2Q86WR7 435 aaPredicted RBP39.03■■■■□ 3.84
GSC-201ENST00000238558 ADAMTS13Q76LX8 1427 aa39.03■■■■□ 3.84
GSC-201ENST00000238558 HSPA1LP34931 641 aa39■■■■□ 3.83
GSC-201ENST00000238558 NKTRP30414 1462 aaKnown RBP38.99■■■■□ 3.83
GSC-201ENST00000238558 RBM33Q96EV2 1170 aaKnown RBP38.98■■■■□ 3.83
GSC-201ENST00000238558 CHD2O14647 1828 aaKnown RBP38.97■■■■□ 3.83
GSC-201ENST00000238558 DIP2AQ14689 1571 aa38.94■■■■□ 3.82
GSC-201ENST00000238558 FOXD1Q16676 465 aa38.93■■■■□ 3.82
GSC-201ENST00000238558 KIF1BO60333 1816 aa38.91■■■■□ 3.82
GSC-201ENST00000238558 MPHOSPH9Q99550 1183 aa38.9■■■■□ 3.82
GSC-201ENST00000238558 PIK3R4Q99570 1358 aa38.9■■■■□ 3.82
GSC-201ENST00000238558 SETD5Q9C0A6 1442 aa38.89■■■■□ 3.82
GSC-201ENST00000238558 NEXMIFQ5QGS0 1516 aa38.88■■■■□ 3.81
GSC-201ENST00000238558 DISP3Q9P2K9 1392 aa38.86■■■■□ 3.81
GSC-201ENST00000238558 SETBP1Q9Y6X0 1596 aa38.85■■■■□ 3.81
GSC-201ENST00000238558 NRXN3Q9Y4C0 1643 aa38.85■■■■□ 3.81
GSC-201ENST00000238558 ACIN1Q9UKV3 1341 aaKnown RBP38.82■■■■□ 3.8
GSC-201ENST00000238558 MSH6P52701 1360 aa38.81■■■■□ 3.8
GSC-201ENST00000238558 PTPRUQ92729 1446 aa38.8■■■■□ 3.8
GSC-201ENST00000238558 AMOTL2Q9Y2J4 779 aa38.8■■■■□ 3.8
GSC-201ENST00000238558 RPGRIP1LQ68CZ1 1315 aa38.76■■■■□ 3.8
GSC-201ENST00000238558 FAM135BQ49AJ0 1406 aa38.75■■■■□ 3.79
GSC-201ENST00000238558 NCOA3Q9Y6Q9 1424 aa38.75■■■■□ 3.79
GSC-201ENST00000238558 RAB3GAP2Q9H2M9 1393 aa38.74■■■■□ 3.79
GSC-201ENST00000238558 VGFO15240 615 aaPredicted RBP38.74■■■■□ 3.79
GSC-201ENST00000238558 CCDC144AA2RUR9 1427 aa38.73■■■■□ 3.79
GSC-201ENST00000238558 METP08581 1390 aa38.73■■■■□ 3.79
GSC-201ENST00000238558 C14orf37Q86TY3 774 aa38.7■■■■□ 3.79
GSC-201ENST00000238558 SLAIN2Q9P270 581 aa38.67■■■■□ 3.78
GSC-201ENST00000238558 XRN1Q8IZH2 1706 aaKnown RBP38.66■■■■□ 3.78
GSC-201ENST00000238558 C19orf44Q9H6X5 657 aa38.64■■■■□ 3.78
GSC-201ENST00000238558 PPLO60437 1756 aa38.63■■■■□ 3.77
GSC-201ENST00000238558 SPATA31E1Q6ZUB1 1445 aa38.63■■■■□ 3.77
GSC-201ENST00000238558 ROBO1Q9Y6N7 1651 aa38.62■■■■□ 3.77
GSC-201ENST00000238558 RGL3Q3MIN7 710 aa38.61■■■■□ 3.77
GSC-201ENST00000238558 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.58■■■■□ 3.77
GSC-201ENST00000238558 CADPS2Q86UW7 1296 aa38.58■■■■□ 3.77
GSC-201ENST00000238558 ATF3P18847 181 aa38.57■■■■□ 3.76
GSC-201ENST00000238558 ILDR2Q71H61 639 aa38.57■■■■□ 3.76
GSC-201ENST00000238558 MED1Q15648 1581 aaPredicted RBP38.57■■■■□ 3.76
GSC-201ENST00000238558 SETD1AO15047 1707 aaKnown RBP38.54■■■■□ 3.76
GSC-201ENST00000238558 ADGRF5Q8IZF2 1346 aa38.53■■■■□ 3.76
GSC-201ENST00000238558 HRCP23327 699 aa38.51■■■■□ 3.76
GSC-201ENST00000238558 ANKRD30BQ9BXX2 1392 aa38.51■■■■□ 3.76
GSC-201ENST00000238558 DCCP43146 1447 aa38.46■■■■□ 3.75
GSC-201ENST00000238558 IFT172Q9UG01 1749 aa38.46■■■■□ 3.75
GSC-201ENST00000238558 PTCH1Q13635 1447 aa38.43■■■■□ 3.74
GSC-201ENST00000238558 ROBO2Q9HCK4 1378 aa38.43■■■■□ 3.74
GSC-201ENST00000238558 ADGRL3Q9HAR2 1447 aa38.42■■■■□ 3.74
GSC-201ENST00000238558 PRAG1Q86YV5 1406 aa38.4■■■■□ 3.74
GSC-201ENST00000238558 PHLPP1O60346 1717 aa38.38■■■■□ 3.74
GSC-201ENST00000238558 PIK3C2GO75747 1445 aa38.36■■■■□ 3.73
GSC-201ENST00000238558 BRINP3Q76B58 766 aa38.35■■■■□ 3.73
GSC-201ENST00000238558 MST1RQ04912 1400 aa38.35■■■■□ 3.73
GSC-201ENST00000238558 NALCNQ8IZF0 1738 aa38.35■■■■□ 3.73
GSC-201ENST00000238558 PHF23Q9BUL5 403 aaPredicted RBP38.34■■■■□ 3.73
GSC-201ENST00000238558 COL16A1Q07092 1604 aaPredicted RBP38.29■■■■□ 3.72
GSC-201ENST00000238558 AHDC1Q5TGY3 1603 aaPredicted RBP38.28■■■■□ 3.72
GSC-201ENST00000238558 TMEM132EQ6IEE7 984 aa38.28■■■■□ 3.72
GSC-201ENST00000238558 STK26Q9P289 416 aa38.28■■■■□ 3.72
GSC-201ENST00000238558 LRPPRCP42704 1394 aaKnown RBP38.27■■■■□ 3.72
GSC-201ENST00000238558 JCADQ9P266 1359 aa38.27■■■■□ 3.72
GSC-201ENST00000238558 MYOM2P54296 1465 aa38.27■■■■□ 3.72
GSC-201ENST00000238558 NRXN1Q9ULB1 1477 aa38.26■■■■□ 3.72
GSC-201ENST00000238558 ASXL1Q8IXJ9 1541 aa38.26■■■■□ 3.72
GSC-201ENST00000238558 C14orf93Q9H972 538 aaKnown RBP38.25■■■■□ 3.71
GSC-201ENST00000238558 TECPR2O15040 1411 aa38.23■■■■□ 3.71
GSC-201ENST00000238558 ABCC11Q96J66 1382 aa38.22■■■■□ 3.71
GSC-201ENST00000238558 SOCS7O14512 581 aa38.2■■■■□ 3.71
GSC-201ENST00000238558 CFAP70Q5T0N1 1121 aa38.2■■■■□ 3.71
GSC-201ENST00000238558 WAPLQ7Z5K2 1190 aa38.19■■■■□ 3.7
GSC-201ENST00000238558 C1orf167Q5SNV9 1468 aa38.19■■■■□ 3.7
GSC-201ENST00000238558 YTHDC2Q9H6S0 1430 aaKnown RBP38.18■■■■□ 3.7
GSC-201ENST00000238558 RGS17Q9UGC6 210 aaPredicted RBP38.15■■■■□ 3.7
GSC-201ENST00000238558 KNDC1Q76NI1 1749 aa38.14■■■■□ 3.7
GSC-201ENST00000238558 PLEKHH1Q9ULM0 1364 aa38.12■■■■□ 3.69
GSC-201ENST00000238558 DCAF11Q8TEB1 546 aa38.12■■■■□ 3.69
GSC-201ENST00000238558 KDM2AQ9Y2K7 1162 aa38.12■■■■□ 3.69
GSC-201ENST00000238558 NHSL1Q5SYE7 1610 aa38.12■■■■□ 3.69
GSC-201ENST00000238558 DDX17Q92841 729 aaKnown RBP38.11■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms