RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
VEGFA-201ENST00000230480 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
VEGFA-201ENST00000230480 KIF1BO60333 1816 aa20.49■□□□□ 0.87
VEGFA-201ENST00000230480 CHGAP10645 457 aaKnown RBP20.49■□□□□ 0.87
VEGFA-201ENST00000230480 EID1Q9Y6B2 187 aa20.49■□□□□ 0.87
VEGFA-201ENST00000230480 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
VEGFA-201ENST00000230480 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
VEGFA-201ENST00000230480 PLEKHG1Q9ULL1 1385 aa20.47■□□□□ 0.87
VEGFA-201ENST00000230480 NRXN3Q9Y4C0 1643 aa20.47■□□□□ 0.87
VEGFA-201ENST00000230480 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
VEGFA-201ENST00000230480 SPATA31E1Q6ZUB1 1445 aa20.46■□□□□ 0.87
VEGFA-201ENST00000230480 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-201ENST00000230480 XIRP1Q702N8 1843 aaKnown RBP20.45■□□□□ 0.86
VEGFA-201ENST00000230480 ANKRD30BQ9BXX2 1392 aa20.44■□□□□ 0.86
VEGFA-201ENST00000230480 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
VEGFA-201ENST00000230480 LRRC7Q96NW7 1537 aa20.42■□□□□ 0.86
VEGFA-201ENST00000230480 CHD2O14647 1828 aaKnown RBP20.41■□□□□ 0.86
VEGFA-201ENST00000230480 ACIN1Q9UKV3 1341 aaKnown RBP20.41■□□□□ 0.86
VEGFA-201ENST00000230480 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
VEGFA-201ENST00000230480 CPS1P31327 1500 aa20.41■□□□□ 0.86
VEGFA-201ENST00000230480 PPLO60437 1756 aa20.41■□□□□ 0.86
VEGFA-201ENST00000230480 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.4■□□□□ 0.86
VEGFA-201ENST00000230480 TBX22Q9Y458 520 aa20.39■□□□□ 0.85
VEGFA-201ENST00000230480 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
VEGFA-201ENST00000230480 PTPRUQ92729 1446 aa20.38■□□□□ 0.85
VEGFA-201ENST00000230480 IFT172Q9UG01 1749 aa20.38■□□□□ 0.85
VEGFA-201ENST00000230480 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
VEGFA-201ENST00000230480 KCNA6P17658 529 aa20.37■□□□□ 0.85
VEGFA-201ENST00000230480 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
VEGFA-201ENST00000230480 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
VEGFA-201ENST00000230480 ZNF326Q5BKZ1 582 aaKnown RBP20.36■□□□□ 0.85
VEGFA-201ENST00000230480 HDGFP51858 240 aaKnown RBP20.35■□□□□ 0.85
VEGFA-201ENST00000230480 PPP1R15AO75807 674 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-201ENST00000230480 METP08581 1390 aa20.33■□□□□ 0.84
VEGFA-201ENST00000230480 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
VEGFA-201ENST00000230480 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
VEGFA-201ENST00000230480 DIP2AQ14689 1571 aa20.31■□□□□ 0.84
VEGFA-201ENST00000230480 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-201ENST00000230480 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
VEGFA-201ENST00000230480 RBM33Q96EV2 1170 aaKnown RBP20.31■□□□□ 0.84
VEGFA-201ENST00000230480 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
VEGFA-201ENST00000230480 BCANQ96GW7 911 aa20.28■□□□□ 0.84
VEGFA-201ENST00000230480 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
VEGFA-201ENST00000230480 PIK3R4Q99570 1358 aa20.27■□□□□ 0.84
VEGFA-201ENST00000230480 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
VEGFA-201ENST00000230480 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-201ENST00000230480 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
VEGFA-201ENST00000230480 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
VEGFA-201ENST00000230480 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
VEGFA-201ENST00000230480 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
VEGFA-201ENST00000230480 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
VEGFA-201ENST00000230480 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-201ENST00000230480 PIK3C2GO75747 1445 aa20.21■□□□□ 0.83
VEGFA-201ENST00000230480 MYOM2P54296 1465 aa20.18■□□□□ 0.82
VEGFA-201ENST00000230480 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
VEGFA-201ENST00000230480 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
VEGFA-201ENST00000230480 C14orf93Q9H972 538 aaKnown RBP20.16■□□□□ 0.82
VEGFA-201ENST00000230480 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
VEGFA-201ENST00000230480 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-201ENST00000230480 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
VEGFA-201ENST00000230480 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.81
VEGFA-201ENST00000230480 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
VEGFA-201ENST00000230480 TOM1O60784 492 aa20.13■□□□□ 0.81
VEGFA-201ENST00000230480 PIP4K2BP78356 416 aa20.11■□□□□ 0.81
VEGFA-201ENST00000230480 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
VEGFA-201ENST00000230480 ADGRB1O14514 1584 aa20.11■□□□□ 0.81
VEGFA-201ENST00000230480 TECPR2O15040 1411 aa20.1■□□□□ 0.81
VEGFA-201ENST00000230480 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
VEGFA-201ENST00000230480 NALCNQ8IZF0 1738 aa20.09■□□□□ 0.81
VEGFA-201ENST00000230480 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
VEGFA-201ENST00000230480 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.81
VEGFA-201ENST00000230480 ABCC11Q96J66 1382 aa20.08■□□□□ 0.8
VEGFA-201ENST00000230480 HSPA1LP34931 641 aa20.07■□□□□ 0.8
VEGFA-201ENST00000230480 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
VEGFA-201ENST00000230480 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
VEGFA-201ENST00000230480 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
VEGFA-201ENST00000230480 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
VEGFA-201ENST00000230480 YTHDC2Q9H6S0 1430 aaKnown RBP20.06■□□□□ 0.8
VEGFA-201ENST00000230480 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
VEGFA-201ENST00000230480 MSH6P52701 1360 aa20.05■□□□□ 0.8
VEGFA-201ENST00000230480 ADGRL3Q9HAR2 1447 aa20.04■□□□□ 0.8
VEGFA-201ENST00000230480 WAPLQ7Z5K2 1190 aa20.04■□□□□ 0.8
VEGFA-201ENST00000230480 SLAIN2Q9P270 581 aa20.04■□□□□ 0.8
VEGFA-201ENST00000230480 LAMC1P11047 1609 aa20.04■□□□□ 0.8
VEGFA-201ENST00000230480 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
VEGFA-201ENST00000230480 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
VEGFA-201ENST00000230480 STK26Q9P289 416 aa20.03■□□□□ 0.8
VEGFA-201ENST00000230480 STAC3Q96MF2 364 aa20.02■□□□□ 0.8
VEGFA-201ENST00000230480 MST1RQ04912 1400 aa20.02■□□□□ 0.79
VEGFA-201ENST00000230480 SIRT1Q96EB6 747 aa20■□□□□ 0.79
VEGFA-201ENST00000230480 DCCP43146 1447 aa20■□□□□ 0.79
VEGFA-201ENST00000230480 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
VEGFA-201ENST00000230480 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
VEGFA-201ENST00000230480 NBPF1Q3BBV0 1214 aa19.99■□□□□ 0.79
VEGFA-201ENST00000230480 KIAA1210Q9ULL0 1709 aa19.97■□□□□ 0.79
VEGFA-201ENST00000230480 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
VEGFA-201ENST00000230480 DISP3Q9P2K9 1392 aa19.96■□□□□ 0.79
VEGFA-201ENST00000230480 CADPS2Q86UW7 1296 aa19.96■□□□□ 0.79
VEGFA-201ENST00000230480 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
VEGFA-201ENST00000230480 BRINP3Q76B58 766 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms