RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 PLA2R1Q13018 1463 aa26.61■■□□□ 1.85
PHOX2B-201ENST00000226382 MAGI2Q86UL8 1455 aa26.6■■□□□ 1.85
PHOX2B-201ENST00000226382 CLUAP1Q96AJ1 413 aa26.6■■□□□ 1.85
PHOX2B-201ENST00000226382 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
PHOX2B-201ENST00000226382 TNNQ9UQP3 1299 aa26.58■■□□□ 1.85
PHOX2B-201ENST00000226382 GZF1Q9H116 711 aaPredicted RBP26.57■■□□□ 1.84
PHOX2B-201ENST00000226382 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
PHOX2B-201ENST00000226382 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
PHOX2B-201ENST00000226382 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
PHOX2B-201ENST00000226382 PTPRGP23470 1445 aa26.55■■□□□ 1.84
PHOX2B-201ENST00000226382 ZNF521Q96K83 1311 aa26.55■■□□□ 1.84
PHOX2B-201ENST00000226382 TRPM1Q7Z4N2 1603 aa26.54■■□□□ 1.84
PHOX2B-201ENST00000226382 ABCC10Q5T3U5 1492 aa26.53■■□□□ 1.84
PHOX2B-201ENST00000226382 SENP3Q9H4L4 574 aaPredicted RBP26.52■■□□□ 1.84
PHOX2B-201ENST00000226382 GPRASP1Q5JY77 1395 aa26.51■■□□□ 1.84
PHOX2B-201ENST00000226382 PDE4CQ08493 712 aa26.51■■□□□ 1.83
PHOX2B-201ENST00000226382 USP19O94966 1318 aa26.5■■□□□ 1.83
PHOX2B-201ENST00000226382 CCDC141Q6ZP82 1450 aa26.48■■□□□ 1.83
PHOX2B-201ENST00000226382 SHANK2Q9UPX8 1470 aa26.48■■□□□ 1.83
PHOX2B-201ENST00000226382 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
PHOX2B-201ENST00000226382 RBM10P98175 930 aaKnown RBP26.46■■□□□ 1.83
PHOX2B-201ENST00000226382 WDR7Q9Y4E6 1490 aa26.45■■□□□ 1.82
PHOX2B-201ENST00000226382 E9PSI1 815 aa26.45■■□□□ 1.82
PHOX2B-201ENST00000226382 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
PHOX2B-201ENST00000226382 BECN1Q14457 450 aa26.44■■□□□ 1.82
PHOX2B-201ENST00000226382 SYCP2Q9BX26 1530 aa26.42■■□□□ 1.82
PHOX2B-201ENST00000226382 RLBP1P12271 317 aa26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 NKTRP30414 1462 aaKnown RBP26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 FGD1P98174 961 aa26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 CFAP70Q5T0N1 1121 aa26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 PRDM15P57071 1507 aaPredicted RBP26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 PCDHB15Q9Y5E8 787 aa26.41■■□□□ 1.82
PHOX2B-201ENST00000226382 ADCY10Q96PN6 1610 aa26.4■■□□□ 1.82
PHOX2B-201ENST00000226382 CDCA8Q53HL2 280 aa26.39■■□□□ 1.81
PHOX2B-201ENST00000226382 WWC1Q8IX03 1113 aa26.39■■□□□ 1.81
PHOX2B-201ENST00000226382 CARD14Q9BXL6 1004 aa26.39■■□□□ 1.81
PHOX2B-201ENST00000226382 TRMT2AQ8IZ69 625 aaKnown RBP26.38■■□□□ 1.81
PHOX2B-201ENST00000226382 UPF2Q9HAU5 1272 aaKnown RBP26.38■■□□□ 1.81
PHOX2B-201ENST00000226382 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
PHOX2B-201ENST00000226382 RRAGDQ9NQL2 400 aaPredicted RBP26.37■■□□□ 1.81
PHOX2B-201ENST00000226382 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
PHOX2B-201ENST00000226382 CHGAP10645 457 aaKnown RBP26.36■■□□□ 1.81
PHOX2B-201ENST00000226382 PDZRN3Q9UPQ7 1066 aa26.36■■□□□ 1.81
PHOX2B-201ENST00000226382 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
PHOX2B-201ENST00000226382 EIF3AQ14152 1382 aaKnown RBP26.36■■□□□ 1.81
PHOX2B-201ENST00000226382 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
PHOX2B-201ENST00000226382 ERCC6Q03468 1493 aa26.35■■□□□ 1.81
PHOX2B-201ENST00000226382 AAMPQ13685 434 aa26.35■■□□□ 1.81
PHOX2B-201ENST00000226382 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
PHOX2B-201ENST00000226382 TBC1D2Q9BYX2 928 aa26.34■■□□□ 1.81
PHOX2B-201ENST00000226382 MFAP1P55081 439 aaKnown RBP26.34■■□□□ 1.81
PHOX2B-201ENST00000226382 AFAP1Q8N556 730 aa26.33■■□□□ 1.81
PHOX2B-201ENST00000226382 PANK2Q9BZ23 570 aa26.33■■□□□ 1.81
PHOX2B-201ENST00000226382 FAM43AQ8N2R8 423 aa26.33■■□□□ 1.8
PHOX2B-201ENST00000226382 ABCA8O94911 1581 aa26.32■■□□□ 1.8
PHOX2B-201ENST00000226382 INSRP06213 1382 aa26.31■■□□□ 1.8
PHOX2B-201ENST00000226382 MAPK8IP3Q9UPT6 1336 aa26.31■■□□□ 1.8
PHOX2B-201ENST00000226382 PDE3AQ14432 1141 aa26.3■■□□□ 1.8
PHOX2B-201ENST00000226382 TCP11L2Q8N4U5 519 aa26.3■■□□□ 1.8
PHOX2B-201ENST00000226382 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
PHOX2B-201ENST00000226382 ASXL1Q8IXJ9 1541 aa26.28■■□□□ 1.8
PHOX2B-201ENST00000226382 RARSP54136 660 aaKnown RBP26.28■■□□□ 1.8
PHOX2B-201ENST00000226382 HSP90AA2PQ14568 343 aaPredicted RBP26.26■■□□□ 1.79
PHOX2B-201ENST00000226382 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
PHOX2B-201ENST00000226382 PDIA4P13667 645 aaKnown RBP26.26■■□□□ 1.79
PHOX2B-201ENST00000226382 SLC12A5Q9H2X9 1139 aa26.26■■□□□ 1.79
PHOX2B-201ENST00000226382 TRAK1Q9UPV9 953 aa26.25■■□□□ 1.79
PHOX2B-201ENST00000226382 BCL11BQ9C0K0 894 aaPredicted RBP26.25■■□□□ 1.79
PHOX2B-201ENST00000226382 NAP1L5Q96NT1 182 aaPredicted RBP26.24■■□□□ 1.79
PHOX2B-201ENST00000226382 TSR2Q969E8 191 aaKnown RBP26.23■■□□□ 1.79
PHOX2B-201ENST00000226382 ANTXR1Q9H6X2 564 aa26.23■■□□□ 1.79
PHOX2B-201ENST00000226382 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
PHOX2B-201ENST00000226382 MYO5CQ9NQX4 1742 aa26.23■■□□□ 1.79
PHOX2B-201ENST00000226382 ARHGEF5Q12774 1597 aa26.22■■□□□ 1.79
PHOX2B-201ENST00000226382 PIK3C2GO75747 1445 aa26.22■■□□□ 1.79
PHOX2B-201ENST00000226382 XRCC6P12956 609 aaKnown RBP eCLIP26.22■■□□□ 1.79
PHOX2B-201ENST00000226382 FTSJ3Q8IY81 847 aaKnown RBP26.22■■□□□ 1.79
PHOX2B-201ENST00000226382 TBC1D32Q96NH3 1257 aa26.22■■□□□ 1.79
PHOX2B-201ENST00000226382 PMFBP1Q8TBY8 1022 aa26.21■■□□□ 1.79
PHOX2B-201ENST00000226382 NUTM2DQ5VT03 806 aaPredicted RBP26.2■■□□□ 1.79
PHOX2B-201ENST00000226382 GOLGA6L3A6NEY3 463 aa26.2■■□□□ 1.78
PHOX2B-201ENST00000226382 CDC42BPBQ9Y5S2 1711 aa26.2■■□□□ 1.78
PHOX2B-201ENST00000226382 SCAF11Q99590 1463 aaKnown RBP26.2■■□□□ 1.78
PHOX2B-201ENST00000226382 FOXD4L1Q9NU39 408 aa26.2■■□□□ 1.78
PHOX2B-201ENST00000226382 KIF3BO15066 747 aa26.19■■□□□ 1.78
PHOX2B-201ENST00000226382 MTHFSP49914 203 aa26.19■■□□□ 1.78
PHOX2B-201ENST00000226382 NUP160Q12769 1436 aa26.19■■□□□ 1.78
PHOX2B-201ENST00000226382 SAFB2Q14151 953 aaKnown RBP eCLIP26.19■■□□□ 1.78
PHOX2B-201ENST00000226382 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
PHOX2B-201ENST00000226382 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.78
PHOX2B-201ENST00000226382 TMEM132EQ6IEE7 984 aa26.17■■□□□ 1.78
PHOX2B-201ENST00000226382 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
PHOX2B-201ENST00000226382 RWDD1Q9H446 243 aaPredicted RBP26.17■■□□□ 1.78
PHOX2B-201ENST00000226382 EIF2AK4Q9P2K8 1649 aaKnown RBP26.16■■□□□ 1.78
PHOX2B-201ENST00000226382 SPAG9O60271 1321 aaKnown RBP26.16■■□□□ 1.78
PHOX2B-201ENST00000226382 MCM4P33991 863 aa26.15■■□□□ 1.78
PHOX2B-201ENST00000226382 C22orf23Q9BZE7 217 aa26.15■■□□□ 1.78
PHOX2B-201ENST00000226382 ITPRIPQ8IWB1 547 aa26.14■■□□□ 1.78
PHOX2B-201ENST00000226382 RUNDC1Q96C34 613 aa26.14■■□□□ 1.78
PHOX2B-201ENST00000226382 EFCAB2Q5VUJ9 269 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms