RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
LAMB1-201ENST00000222399 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
LAMB1-201ENST00000222399 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
LAMB1-201ENST00000222399 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
LAMB1-201ENST00000222399 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
LAMB1-201ENST00000222399 SKOR2Q2VWA4 1001 aaPredicted RBP16.72■□□□□ 0.27
LAMB1-201ENST00000222399 REC8O95072 547 aa16.72■□□□□ 0.27
LAMB1-201ENST00000222399 PSME1Q06323 249 aa16.71■□□□□ 0.27
LAMB1-201ENST00000222399 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
LAMB1-201ENST00000222399 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
LAMB1-201ENST00000222399 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
LAMB1-201ENST00000222399 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
LAMB1-201ENST00000222399 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
LAMB1-201ENST00000222399 CCDC7Q96M83 1385 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 KIF21BO75037 1637 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
LAMB1-201ENST00000222399 GNAI1P63096 354 aa16.69■□□□□ 0.26
LAMB1-201ENST00000222399 TPM3P06753 285 aa16.69■□□□□ 0.26
LAMB1-201ENST00000222399 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
LAMB1-201ENST00000222399 ZKSCAN1P17029 563 aaPredicted RBP16.68■□□□□ 0.26
LAMB1-201ENST00000222399 CPLX2Q6PUV4 134 aaKnown RBP16.68■□□□□ 0.26
LAMB1-201ENST00000222399 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
LAMB1-201ENST00000222399 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
LAMB1-201ENST00000222399 DDX49Q9Y6V7 483 aaKnown RBP16.67■□□□□ 0.26
LAMB1-201ENST00000222399 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
LAMB1-201ENST00000222399 AAMPQ13685 434 aa16.66■□□□□ 0.26
LAMB1-201ENST00000222399 FKBP5Q13451 457 aaPredicted RBP16.65■□□□□ 0.26
LAMB1-201ENST00000222399 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
LAMB1-201ENST00000222399 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
LAMB1-201ENST00000222399 GOLGA6L1Q8N7Z2 621 aa16.65■□□□□ 0.26
LAMB1-201ENST00000222399 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
LAMB1-201ENST00000222399 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
LAMB1-201ENST00000222399 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.251e-10■■■■■ 44
LAMB1-201ENST00000222399 GOLGA6L19H0YKK7 550 aa16.64■□□□□ 0.25
LAMB1-201ENST00000222399 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
LAMB1-201ENST00000222399 TSPYL4Q9UJ04 414 aa16.64■□□□□ 0.25
LAMB1-201ENST00000222399 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
LAMB1-201ENST00000222399 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 CEP89Q96ST8 783 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 TRIM29Q14134 588 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
LAMB1-201ENST00000222399 TPM2P07951 284 aa16.62■□□□□ 0.25
LAMB1-201ENST00000222399 TSR1Q2NL82 804 aaKnown RBP16.62■□□□□ 0.25
LAMB1-201ENST00000222399 BECN2A8MW95 431 aa16.62■□□□□ 0.25
LAMB1-201ENST00000222399 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
LAMB1-201ENST00000222399 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
LAMB1-201ENST00000222399 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
LAMB1-201ENST00000222399 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
LAMB1-201ENST00000222399 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
LAMB1-201ENST00000222399 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
LAMB1-201ENST00000222399 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
LAMB1-201ENST00000222399 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
LAMB1-201ENST00000222399 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
LAMB1-201ENST00000222399 TPM1P09493 284 aa16.6■□□□□ 0.25
LAMB1-201ENST00000222399 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
LAMB1-201ENST00000222399 ERC2O15083 957 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 ATF3P18847 181 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 TRDNQ13061 729 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 MSH5O43196 834 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 APPP05067 770 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 HMOX1P09601 288 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 CPLX1O14810 134 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 GGNBP2Q9H3C7 697 aa16.59■□□□□ 0.25
LAMB1-201ENST00000222399 VPS37DQ86XT2 251 aa16.58■□□□□ 0.25
LAMB1-201ENST00000222399 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
LAMB1-201ENST00000222399 ARID3AQ99856 593 aa16.58■□□□□ 0.24
LAMB1-201ENST00000222399 GSE1Q14687 1217 aa16.57■□□□□ 0.24
LAMB1-201ENST00000222399 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
LAMB1-201ENST00000222399 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
LAMB1-201ENST00000222399 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
LAMB1-201ENST00000222399 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
LAMB1-201ENST00000222399 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
LAMB1-201ENST00000222399 RIC3Q7Z5B4 369 aa16.55■□□□□ 0.24
LAMB1-201ENST00000222399 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
LAMB1-201ENST00000222399 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
LAMB1-201ENST00000222399 ERICH2A1L162 156 aa16.54■□□□□ 0.24
LAMB1-201ENST00000222399 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
LAMB1-201ENST00000222399 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
LAMB1-201ENST00000222399 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
LAMB1-201ENST00000222399 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
LAMB1-201ENST00000222399 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
LAMB1-201ENST00000222399 NUCB2P80303 420 aa16.53■□□□□ 0.24
LAMB1-201ENST00000222399 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 EHBP1L1Q8N3D4 1523 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 PLEKHH2Q8IVE3 1493 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
LAMB1-201ENST00000222399 PDE4CQ08493 712 aa16.52■□□□□ 0.24
LAMB1-201ENST00000222399 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms