RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 GCC2Q8IWJ2 1684 aa20.35■□□□□ 0.85
UPK1A-201ENST00000222275 HSPA1LP34931 641 aa20.35■□□□□ 0.85
UPK1A-201ENST00000222275 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
UPK1A-201ENST00000222275 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
UPK1A-201ENST00000222275 TOM1O60784 492 aa20.34■□□□□ 0.85
UPK1A-201ENST00000222275 TMEM131LA2VDJ0 1609 aa20.34■□□□□ 0.85
UPK1A-201ENST00000222275 MYO5BQ9ULV0 1848 aa20.33■□□□□ 0.85
UPK1A-201ENST00000222275 KCNA6P17658 529 aa20.33■□□□□ 0.85
UPK1A-201ENST00000222275 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
UPK1A-201ENST00000222275 BCANQ96GW7 911 aa20.3■□□□□ 0.84
UPK1A-201ENST00000222275 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
UPK1A-201ENST00000222275 ILDR2Q71H61 639 aa20.28■□□□□ 0.84
UPK1A-201ENST00000222275 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
UPK1A-201ENST00000222275 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
UPK1A-201ENST00000222275 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
UPK1A-201ENST00000222275 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
UPK1A-201ENST00000222275 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
UPK1A-201ENST00000222275 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
UPK1A-201ENST00000222275 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
UPK1A-201ENST00000222275 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
UPK1A-201ENST00000222275 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
UPK1A-201ENST00000222275 HRCP23327 699 aa20.25■□□□□ 0.83
UPK1A-201ENST00000222275 FOXD1Q16676 465 aa20.24■□□□□ 0.83
UPK1A-201ENST00000222275 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
UPK1A-201ENST00000222275 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
UPK1A-201ENST00000222275 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
UPK1A-201ENST00000222275 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
UPK1A-201ENST00000222275 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
UPK1A-201ENST00000222275 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
UPK1A-201ENST00000222275 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
UPK1A-201ENST00000222275 NWD1Q149M9 1564 aa20.16■□□□□ 0.82
UPK1A-201ENST00000222275 CLTCL1P53675 1640 aa20.16■□□□□ 0.82
UPK1A-201ENST00000222275 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
UPK1A-201ENST00000222275 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.81
UPK1A-201ENST00000222275 TRPM2O94759 1503 aa20.13■□□□□ 0.81
UPK1A-201ENST00000222275 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
UPK1A-201ENST00000222275 METP08581 1390 aa20.12■□□□□ 0.81
UPK1A-201ENST00000222275 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
UPK1A-201ENST00000222275 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
UPK1A-201ENST00000222275 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
UPK1A-201ENST00000222275 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
UPK1A-201ENST00000222275 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.81
UPK1A-201ENST00000222275 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
UPK1A-201ENST00000222275 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
UPK1A-201ENST00000222275 MSH6P52701 1360 aa20.06■□□□□ 0.8
UPK1A-201ENST00000222275 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
UPK1A-201ENST00000222275 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
UPK1A-201ENST00000222275 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
UPK1A-201ENST00000222275 DIP2AQ14689 1571 aa20.02■□□□□ 0.8
UPK1A-201ENST00000222275 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
UPK1A-201ENST00000222275 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.79
UPK1A-201ENST00000222275 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
UPK1A-201ENST00000222275 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
UPK1A-201ENST00000222275 RPGRIP1LQ68CZ1 1315 aa20.01■□□□□ 0.79
UPK1A-201ENST00000222275 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
UPK1A-201ENST00000222275 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
UPK1A-201ENST00000222275 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
UPK1A-201ENST00000222275 KIF1BO60333 1816 aa19.99■□□□□ 0.79
UPK1A-201ENST00000222275 ROBO1Q9Y6N7 1651 aa19.98■□□□□ 0.79
UPK1A-201ENST00000222275 ATF3P18847 181 aa19.96■□□□□ 0.79
UPK1A-201ENST00000222275 CADPS2Q86UW7 1296 aa19.96■□□□□ 0.79
UPK1A-201ENST00000222275 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
UPK1A-201ENST00000222275 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
UPK1A-201ENST00000222275 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.79
UPK1A-201ENST00000222275 SOCS7O14512 581 aa19.95■□□□□ 0.78
UPK1A-201ENST00000222275 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
UPK1A-201ENST00000222275 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
UPK1A-201ENST00000222275 SETD1AO15047 1707 aaKnown RBP19.91■□□□□ 0.78
UPK1A-201ENST00000222275 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
UPK1A-201ENST00000222275 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
UPK1A-201ENST00000222275 PPLO60437 1756 aa19.9■□□□□ 0.78
UPK1A-201ENST00000222275 MST1RQ04912 1400 aa19.88■□□□□ 0.77
UPK1A-201ENST00000222275 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
UPK1A-201ENST00000222275 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
UPK1A-201ENST00000222275 STK26Q9P289 416 aa19.87■□□□□ 0.77
UPK1A-201ENST00000222275 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
UPK1A-201ENST00000222275 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
UPK1A-201ENST00000222275 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
UPK1A-201ENST00000222275 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
UPK1A-201ENST00000222275 DCCP43146 1447 aa19.84■□□□□ 0.77
UPK1A-201ENST00000222275 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
UPK1A-201ENST00000222275 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
UPK1A-201ENST00000222275 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.77
UPK1A-201ENST00000222275 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
UPK1A-201ENST00000222275 C14orf93Q9H972 538 aaKnown RBP19.83■□□□□ 0.77
UPK1A-201ENST00000222275 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
UPK1A-201ENST00000222275 JCADQ9P266 1359 aa19.83■□□□□ 0.76
UPK1A-201ENST00000222275 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
UPK1A-201ENST00000222275 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
UPK1A-201ENST00000222275 ASXL1Q8IXJ9 1541 aa19.81■□□□□ 0.76
UPK1A-201ENST00000222275 PIK3C2GO75747 1445 aa19.81■□□□□ 0.76
UPK1A-201ENST00000222275 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
UPK1A-201ENST00000222275 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
UPK1A-201ENST00000222275 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
UPK1A-201ENST00000222275 LRPPRCP42704 1394 aaKnown RBP19.79■□□□□ 0.76
UPK1A-201ENST00000222275 AHDC1Q5TGY3 1603 aaPredicted RBP19.79■□□□□ 0.76
UPK1A-201ENST00000222275 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
UPK1A-201ENST00000222275 LRP6O75581 1613 aa19.77■□□□□ 0.76
UPK1A-201ENST00000222275 NRXN1Q9ULB1 1477 aa19.77■□□□□ 0.76
UPK1A-201ENST00000222275 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms