RNA–Protein interactions for RNA: ENST00000221954.6

CEACAM4-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEACAM4, Length 1,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-201ENST00000221954 CPS1P31327 1500 aa31.12■■■□□ 2.57
CEACAM4-201ENST00000221954 ZFYVE9O95405 1425 aa31.11■■■□□ 2.57
CEACAM4-201ENST00000221954 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.11■■■□□ 2.57
CEACAM4-201ENST00000221954 BCANQ96GW7 911 aa31.11■■■□□ 2.57
CEACAM4-201ENST00000221954 CLTCL1P53675 1640 aa31.09■■■□□ 2.57
CEACAM4-201ENST00000221954 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
CEACAM4-201ENST00000221954 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
CEACAM4-201ENST00000221954 ZNF326Q5BKZ1 582 aaKnown RBP31.05■■■□□ 2.56
CEACAM4-201ENST00000221954 KIF1BO60333 1816 aa31.05■■■□□ 2.56
CEACAM4-201ENST00000221954 PLEKHG1Q9ULL1 1385 aa31.04■■■□□ 2.56
CEACAM4-201ENST00000221954 SLC26A8Q96RN1 970 aa31.03■■■□□ 2.56
CEACAM4-201ENST00000221954 FOXD1Q16676 465 aa31.02■■■□□ 2.56
CEACAM4-201ENST00000221954 NUTM2DQ5VT03 806 aaPredicted RBP31■■■□□ 2.55
CEACAM4-201ENST00000221954 SENP3Q9H4L4 574 aaPredicted RBP30.99■■■□□ 2.55
CEACAM4-201ENST00000221954 STRCP1A6NGW2 1772 aa30.99■■■□□ 2.55
CEACAM4-201ENST00000221954 CCDC144AA2RUR9 1427 aa30.94■■■□□ 2.54
CEACAM4-201ENST00000221954 UBAP1LF5GYI3 381 aa30.92■■■□□ 2.54
CEACAM4-201ENST00000221954 HRCP23327 699 aa30.92■■■□□ 2.54
CEACAM4-201ENST00000221954 KCNA6P17658 529 aa30.91■■■□□ 2.54
CEACAM4-201ENST00000221954 LRRC7Q96NW7 1537 aa30.91■■■□□ 2.54
CEACAM4-201ENST00000221954 TBX22Q9Y458 520 aa30.9■■■□□ 2.54
CEACAM4-201ENST00000221954 DIP2AQ14689 1571 aa30.9■■■□□ 2.54
CEACAM4-201ENST00000221954 NEXMIFQ5QGS0 1516 aa30.88■■■□□ 2.53
CEACAM4-201ENST00000221954 ADAMTS13Q76LX8 1427 aa30.85■■■□□ 2.53
CEACAM4-201ENST00000221954 RPGRIP1LQ68CZ1 1315 aa30.85■■■□□ 2.53
CEACAM4-201ENST00000221954 NWD1Q149M9 1564 aa30.84■■■□□ 2.53
CEACAM4-201ENST00000221954 TOM1O60784 492 aa30.84■■■□□ 2.53
CEACAM4-201ENST00000221954 SETBP1Q9Y6X0 1596 aa30.83■■■□□ 2.53
CEACAM4-201ENST00000221954 NKTRP30414 1462 aaKnown RBP30.82■■■□□ 2.53
CEACAM4-201ENST00000221954 VGFO15240 615 aaPredicted RBP30.82■■■□□ 2.52
CEACAM4-201ENST00000221954 CHD2O14647 1828 aaKnown RBP30.82■■■□□ 2.52
CEACAM4-201ENST00000221954 PROSER2Q86WR7 435 aaPredicted RBP30.81■■■□□ 2.52
CEACAM4-201ENST00000221954 PIK3R4Q99570 1358 aa30.8■■■□□ 2.52
CEACAM4-201ENST00000221954 NRXN3Q9Y4C0 1643 aa30.78■■■□□ 2.52
CEACAM4-201ENST00000221954 PPLO60437 1756 aa30.77■■■□□ 2.52
CEACAM4-201ENST00000221954 SCAF1Q9H7N4 1312 aaKnown RBP30.76■■■□□ 2.52
CEACAM4-201ENST00000221954 XIRP1Q702N8 1843 aaKnown RBP30.76■■■□□ 2.51
CEACAM4-201ENST00000221954 RGL3Q3MIN7 710 aa30.76■■■□□ 2.51
CEACAM4-201ENST00000221954 TMEM94Q12767 1356 aa30.76■■■□□ 2.51
CEACAM4-201ENST00000221954 SPATA31E1Q6ZUB1 1445 aa30.75■■■□□ 2.51
CEACAM4-201ENST00000221954 PIP4K2BP78356 416 aa30.73■■■□□ 2.51
CEACAM4-201ENST00000221954 ANKRD30BQ9BXX2 1392 aa30.69■■■□□ 2.5
CEACAM4-201ENST00000221954 RBM33Q96EV2 1170 aaKnown RBP30.69■■■□□ 2.5
CEACAM4-201ENST00000221954 AMOTL2Q9Y2J4 779 aa30.68■■■□□ 2.5
CEACAM4-201ENST00000221954 IFT172Q9UG01 1749 aa30.67■■■□□ 2.5
CEACAM4-201ENST00000221954 METP08581 1390 aa30.66■■■□□ 2.5
CEACAM4-201ENST00000221954 MSH6P52701 1360 aa30.66■■■□□ 2.5
CEACAM4-201ENST00000221954 PTPRUQ92729 1446 aa30.64■■■□□ 2.5
CEACAM4-201ENST00000221954 C14orf37Q86TY3 774 aa30.64■■■□□ 2.5
CEACAM4-201ENST00000221954 ALKQ9UM73 1620 aa30.64■■■□□ 2.5
CEACAM4-201ENST00000221954 XRN1Q8IZH2 1706 aaKnown RBP30.62■■■□□ 2.49
CEACAM4-201ENST00000221954 NCOA3Q9Y6Q9 1424 aa30.62■■■□□ 2.49
CEACAM4-201ENST00000221954 ADGRF5Q8IZF2 1346 aa30.61■■■□□ 2.49
CEACAM4-201ENST00000221954 TRIM26Q12899 539 aaPredicted RBP30.6■■■□□ 2.49
CEACAM4-201ENST00000221954 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
CEACAM4-201ENST00000221954 MYOM2P54296 1465 aa30.52■■■□□ 2.48
CEACAM4-201ENST00000221954 C19orf44Q9H6X5 657 aa30.52■■■□□ 2.48
CEACAM4-201ENST00000221954 PIK3C2GO75747 1445 aa30.52■■■□□ 2.48
CEACAM4-201ENST00000221954 HSPA1LP34931 641 aa30.5■■■□□ 2.47
CEACAM4-201ENST00000221954 ATF3P18847 181 aa30.49■■■□□ 2.47
CEACAM4-201ENST00000221954 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.48■■■□□ 2.47
CEACAM4-201ENST00000221954 CADPS2Q86UW7 1296 aa30.48■■■□□ 2.47
CEACAM4-201ENST00000221954 PTCH1Q13635 1447 aa30.47■■■□□ 2.47
CEACAM4-201ENST00000221954 SLAIN2Q9P270 581 aa30.47■■■□□ 2.47
CEACAM4-201ENST00000221954 FAM135BQ49AJ0 1406 aa30.46■■■□□ 2.47
CEACAM4-201ENST00000221954 NRXN1Q9ULB1 1477 aa30.45■■■□□ 2.47
CEACAM4-201ENST00000221954 LAMC1P11047 1609 aa30.45■■■□□ 2.47
CEACAM4-201ENST00000221954 DCAF11Q8TEB1 546 aa30.45■■■□□ 2.47
CEACAM4-201ENST00000221954 PRAG1Q86YV5 1406 aa30.44■■■□□ 2.46
CEACAM4-201ENST00000221954 STAC3Q96MF2 364 aa30.43■■■□□ 2.46
CEACAM4-201ENST00000221954 KDM2AQ9Y2K7 1162 aa30.43■■■□□ 2.46
CEACAM4-201ENST00000221954 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
CEACAM4-201ENST00000221954 DCCP43146 1447 aa30.42■■■□□ 2.46
CEACAM4-201ENST00000221954 ROBO2Q9HCK4 1378 aa30.41■■■□□ 2.46
CEACAM4-201ENST00000221954 C14orf93Q9H972 538 aaKnown RBP30.41■■■□□ 2.46
CEACAM4-201ENST00000221954 ADGRL3Q9HAR2 1447 aa30.4■■■□□ 2.46
CEACAM4-201ENST00000221954 TMEM132EQ6IEE7 984 aa30.4■■■□□ 2.46
CEACAM4-201ENST00000221954 STK26Q9P289 416 aa30.4■■■□□ 2.46
CEACAM4-201ENST00000221954 LRPPRCP42704 1394 aaKnown RBP30.39■■■□□ 2.45
CEACAM4-201ENST00000221954 NALCNQ8IZF0 1738 aa30.38■■■□□ 2.45
CEACAM4-201ENST00000221954 ASXL1Q8IXJ9 1541 aa30.37■■■□□ 2.45
CEACAM4-201ENST00000221954 CFAP70Q5T0N1 1121 aa30.37■■■□□ 2.45
CEACAM4-201ENST00000221954 DHX57Q6P158 1386 aaKnown RBP30.35■■■□□ 2.45
CEACAM4-201ENST00000221954 YTHDC2Q9H6S0 1430 aaKnown RBP30.35■■■□□ 2.45
CEACAM4-201ENST00000221954 KNDC1Q76NI1 1749 aa30.34■■■□□ 2.45
CEACAM4-201ENST00000221954 TECPR2O15040 1411 aa30.34■■■□□ 2.45
CEACAM4-201ENST00000221954 ABCC11Q96J66 1382 aa30.34■■■□□ 2.45
CEACAM4-201ENST00000221954 MST1RQ04912 1400 aa30.27■■■□□ 2.44
CEACAM4-201ENST00000221954 WAPLQ7Z5K2 1190 aa30.26■■■□□ 2.43
CEACAM4-201ENST00000221954 PHLPP1O60346 1717 aa30.25■■■□□ 2.43
CEACAM4-201ENST00000221954 SIRT1Q96EB6 747 aa30.24■■■□□ 2.43
CEACAM4-201ENST00000221954 NEUROD1Q13562 356 aa30.23■■■□□ 2.43
CEACAM4-201ENST00000221954 SIN3AQ96ST3 1273 aa30.23■■■□□ 2.43
CEACAM4-201ENST00000221954 BRINP3Q76B58 766 aa30.22■■■□□ 2.43
CEACAM4-201ENST00000221954 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
CEACAM4-201ENST00000221954 ADGRB1O14514 1584 aa30.22■■■□□ 2.43
CEACAM4-201ENST00000221954 CDC42BPGQ6DT37 1551 aa30.21■■■□□ 2.43
CEACAM4-201ENST00000221954 PLEKHH1Q9ULM0 1364 aa30.19■■■□□ 2.42
CEACAM4-201ENST00000221954 DLC1Q96QB1 1528 aa30.18■■■□□ 2.42
CEACAM4-201ENST00000221954 C1orf167Q5SNV9 1468 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms