RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 TTC5Q8N0Z6 440 aa21.91■■□□□ 1.1
EXTL3-201ENST00000220562 C9orf78Q9NZ63 289 aaPredicted RBP21.91■■□□□ 1.1
EXTL3-201ENST00000220562 SYNE3Q6ZMZ3 975 aa21.91■■□□□ 1.1
EXTL3-201ENST00000220562 BECN2A8MW95 431 aa21.9■■□□□ 1.1
EXTL3-201ENST00000220562 GSE1Q14687 1217 aa21.9■■□□□ 1.1
EXTL3-201ENST00000220562 TSR1Q2NL82 804 aaKnown RBP21.9■■□□□ 1.1
EXTL3-201ENST00000220562 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.1
EXTL3-201ENST00000220562 NEXNQ0ZGT2 675 aa21.89■■□□□ 1.1
EXTL3-201ENST00000220562 CHMP4CQ96CF2 233 aa21.89■■□□□ 1.1
EXTL3-201ENST00000220562 DDX19BQ9UMR2 479 aa21.89■■□□□ 1.1
EXTL3-201ENST00000220562 TPM2P07951 284 aa21.88■■□□□ 1.09
EXTL3-201ENST00000220562 RIPK4P57078 832 aa21.88■■□□□ 1.09
EXTL3-201ENST00000220562 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
EXTL3-201ENST00000220562 RUFY2Q8WXA3 655 aa21.88■■□□□ 1.09
EXTL3-201ENST00000220562 IFIT2P09913 472 aaKnown RBP21.87■■□□□ 1.09
EXTL3-201ENST00000220562 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
EXTL3-201ENST00000220562 DZIP1LQ8IYY4 767 aaKnown RBP21.85■■□□□ 1.09
EXTL3-201ENST00000220562 REC8O95072 547 aa21.85■■□□□ 1.09
EXTL3-201ENST00000220562 TRIM29Q14134 588 aa21.85■■□□□ 1.09
EXTL3-201ENST00000220562 LRRFIP1Q32MZ4 808 aaKnown RBP21.85■■□□□ 1.09
EXTL3-201ENST00000220562 RAD21O60216 631 aa21.84■■□□□ 1.09
EXTL3-201ENST00000220562 TPM1P09493 284 aa21.84■■□□□ 1.09
EXTL3-201ENST00000220562 ZKSCAN1P17029 563 aaPredicted RBP21.83■■□□□ 1.09
EXTL3-201ENST00000220562 AMOTL1Q8IY63 956 aa21.83■■□□□ 1.08
EXTL3-201ENST00000220562 NOL10Q9BSC4 688 aaKnown RBP21.83■■□□□ 1.08
EXTL3-201ENST00000220562 APPP05067 770 aa21.82■■□□□ 1.08
EXTL3-201ENST00000220562 ZNF592Q92610 1267 aa21.82■■□□□ 1.08
EXTL3-201ENST00000220562 HSP90AA2PQ14568 343 aaPredicted RBP21.82■■□□□ 1.08
EXTL3-201ENST00000220562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.82■■□□□ 1.08
EXTL3-201ENST00000220562 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
EXTL3-201ENST00000220562 API5Q9BZZ5 524 aaKnown RBP21.81■■□□□ 1.08
EXTL3-201ENST00000220562 PTPRGP23470 1445 aa21.81■■□□□ 1.08
EXTL3-201ENST00000220562 MSH5O43196 834 aa21.81■■□□□ 1.08
EXTL3-201ENST00000220562 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
EXTL3-201ENST00000220562 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
EXTL3-201ENST00000220562 PCMTD1Q96MG8 357 aaPredicted RBP21.8■■□□□ 1.08
EXTL3-201ENST00000220562 CPLX2Q6PUV4 134 aaKnown RBP21.79■■□□□ 1.08
EXTL3-201ENST00000220562 FKBP5Q13451 457 aaPredicted RBP21.79■■□□□ 1.08
EXTL3-201ENST00000220562 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
EXTL3-201ENST00000220562 CPLX1O14810 134 aa21.77■■□□□ 1.08
EXTL3-201ENST00000220562 DDX58O95786 925 aaKnown RBP21.77■■□□□ 1.08
EXTL3-201ENST00000220562 G3BP1Q13283 466 aaKnown RBP eCLIP21.77■■□□□ 1.08
EXTL3-201ENST00000220562 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
EXTL3-201ENST00000220562 PSME1Q06323 249 aa21.77■■□□□ 1.08
EXTL3-201ENST00000220562 BICD2Q8TD16 824 aa21.76■■□□□ 1.07
EXTL3-201ENST00000220562 TCEAL9Q9UHQ7 104 aa21.76■■□□□ 1.07
EXTL3-201ENST00000220562 SYTL4Q96C24 671 aaPredicted RBP21.76■■□□□ 1.07
EXTL3-201ENST00000220562 FOSBP53539 338 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 CCDC70Q6NSX1 233 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 NFXL1Q6ZNB6 911 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 VPS37DQ86XT2 251 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
EXTL3-201ENST00000220562 RNF20Q5VTR2 975 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
EXTL3-201ENST00000220562 FBXW7Q969H0 707 aa21.74■■□□□ 1.07
EXTL3-201ENST00000220562 HMOX1P09601 288 aa21.74■■□□□ 1.07
EXTL3-201ENST00000220562 CHMP5Q9NZZ3 219 aa21.74■■□□□ 1.07
EXTL3-201ENST00000220562 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
EXTL3-201ENST00000220562 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
EXTL3-201ENST00000220562 DHX16O60231 1041 aaKnown RBP21.73■■□□□ 1.07
EXTL3-201ENST00000220562 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
EXTL3-201ENST00000220562 TRDNQ13061 729 aa21.73■■□□□ 1.07
EXTL3-201ENST00000220562 CTDP1Q9Y5B0 961 aaPredicted RBP21.73■■□□□ 1.07
EXTL3-201ENST00000220562 VPS37CA5D8V6 355 aaPredicted RBP21.73■■□□□ 1.07
EXTL3-201ENST00000220562 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
EXTL3-201ENST00000220562 CCDC47Q96A33 483 aaKnown RBP21.72■■□□□ 1.07
EXTL3-201ENST00000220562 SMC3Q9UQE7 1217 aa21.72■■□□□ 1.07
EXTL3-201ENST00000220562 SETQ01105 290 aaPredicted RBP21.72■■□□□ 1.07
EXTL3-201ENST00000220562 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.72■■□□□ 1.07
EXTL3-201ENST00000220562 LNPKQ9C0E8 428 aa21.71■■□□□ 1.07
EXTL3-201ENST00000220562 FANCIQ9NVI1 1328 aa21.71■■□□□ 1.07
EXTL3-201ENST00000220562 GNAI1P63096 354 aa21.71■■□□□ 1.07
EXTL3-201ENST00000220562 GPS2Q13227 327 aa21.7■■□□□ 1.06
EXTL3-201ENST00000220562 HOOK1Q9UJC3 728 aaKnown RBP21.7■■□□□ 1.06
EXTL3-201ENST00000220562 ERICH2A1L162 156 aa21.7■■□□□ 1.06
EXTL3-201ENST00000220562 ANKRD20A12PQ8NF67 263 aa21.7■■□□□ 1.06
EXTL3-201ENST00000220562 CCDC7Q96M83 1385 aa21.7■■□□□ 1.06
EXTL3-201ENST00000220562 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
EXTL3-201ENST00000220562 KIF7Q2M1P5 1343 aa21.69■■□□□ 1.06
EXTL3-201ENST00000220562 PANK1Q8TE04 598 aa21.68■■□□□ 1.06
EXTL3-201ENST00000220562 CUX1P39880 1505 aa21.68■■□□□ 1.06
EXTL3-201ENST00000220562 ERC2O15083 957 aa21.67■■□□□ 1.06
EXTL3-201ENST00000220562 SASS6Q6UVJ0 657 aa21.67■■□□□ 1.06
EXTL3-201ENST00000220562 HOMER1Q86YM7 354 aa21.67■■□□□ 1.06
EXTL3-201ENST00000220562 C22orf23Q9BZE7 217 aa21.67■■□□□ 1.06
EXTL3-201ENST00000220562 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
EXTL3-201ENST00000220562 IPO7O95373 1038 aaKnown RBP21.66■■□□□ 1.06
EXTL3-201ENST00000220562 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
EXTL3-201ENST00000220562 RIC3Q7Z5B4 369 aa21.66■■□□□ 1.06
EXTL3-201ENST00000220562 CABP2Q9NPB3 220 aa21.66■■□□□ 1.06
EXTL3-201ENST00000220562 HSP90AB4PQ58FF6 505 aa21.65■■□□□ 1.06
EXTL3-201ENST00000220562 ZNF771Q7L3S4 317 aaPredicted RBP21.65■■□□□ 1.06
EXTL3-201ENST00000220562 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
EXTL3-201ENST00000220562 GGNBP2Q9H3C7 697 aa21.65■■□□□ 1.06
EXTL3-201ENST00000220562 NUCB2P80303 420 aa21.65■■□□□ 1.06
EXTL3-201ENST00000220562 NEUROD6Q96NK8 337 aa21.64■■□□□ 1.05
EXTL3-201ENST00000220562 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
EXTL3-201ENST00000220562 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
EXTL3-201ENST00000220562 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
EXTL3-201ENST00000220562 PATL2C9JE40 543 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms