RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
RHOXF1-201ENST00000217999 CHGAP10645 457 aaKnown RBP21.66■■□□□ 1.06
RHOXF1-201ENST00000217999 BCANQ96GW7 911 aa21.66■■□□□ 1.06
RHOXF1-201ENST00000217999 PLEKHG1Q9ULL1 1385 aa21.65■■□□□ 1.06
RHOXF1-201ENST00000217999 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
RHOXF1-201ENST00000217999 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.65■■□□□ 1.06
RHOXF1-201ENST00000217999 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.06
RHOXF1-201ENST00000217999 NWD1Q149M9 1564 aa21.64■■□□□ 1.05
RHOXF1-201ENST00000217999 DIP2AQ14689 1571 aa21.62■■□□□ 1.05
RHOXF1-201ENST00000217999 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
RHOXF1-201ENST00000217999 SLC26A8Q96RN1 970 aa21.6■■□□□ 1.05
RHOXF1-201ENST00000217999 TRPM2O94759 1503 aa21.6■■□□□ 1.05
RHOXF1-201ENST00000217999 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
RHOXF1-201ENST00000217999 KCNA6P17658 529 aa21.59■■□□□ 1.05
RHOXF1-201ENST00000217999 ALKQ9UM73 1620 aa21.58■■□□□ 1.05
RHOXF1-201ENST00000217999 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
RHOXF1-201ENST00000217999 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
RHOXF1-201ENST00000217999 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
RHOXF1-201ENST00000217999 KIF1BO60333 1816 aa21.54■■□□□ 1.04
RHOXF1-201ENST00000217999 CLTCL1P53675 1640 aa21.54■■□□□ 1.04
RHOXF1-201ENST00000217999 HSPA1LP34931 641 aa21.53■■□□□ 1.04
RHOXF1-201ENST00000217999 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.04
RHOXF1-201ENST00000217999 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
RHOXF1-201ENST00000217999 TBX22Q9Y458 520 aa21.51■■□□□ 1.03
RHOXF1-201ENST00000217999 MSH6P52701 1360 aa21.5■■□□□ 1.03
RHOXF1-201ENST00000217999 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
RHOXF1-201ENST00000217999 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
RHOXF1-201ENST00000217999 SETBP1Q9Y6X0 1596 aa21.48■■□□□ 1.03
RHOXF1-201ENST00000217999 ADAMTS13Q76LX8 1427 aa21.48■■□□□ 1.03
RHOXF1-201ENST00000217999 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
RHOXF1-201ENST00000217999 NUTM2DQ5VT03 806 aaPredicted RBP21.47■■□□□ 1.03
RHOXF1-201ENST00000217999 NEXMIFQ5QGS0 1516 aa21.45■■□□□ 1.02
RHOXF1-201ENST00000217999 MED1Q15648 1581 aaPredicted RBP21.45■■□□□ 1.02
RHOXF1-201ENST00000217999 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
RHOXF1-201ENST00000217999 NCOA3Q9Y6Q9 1424 aa21.45■■□□□ 1.02
RHOXF1-201ENST00000217999 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
RHOXF1-201ENST00000217999 FAM135BQ49AJ0 1406 aa21.43■■□□□ 1.02
RHOXF1-201ENST00000217999 ROBO1Q9Y6N7 1651 aa21.42■■□□□ 1.02
RHOXF1-201ENST00000217999 C14orf37Q86TY3 774 aa21.41■■□□□ 1.02
RHOXF1-201ENST00000217999 XRN1Q8IZH2 1706 aaKnown RBP21.4■■□□□ 1.02
RHOXF1-201ENST00000217999 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
RHOXF1-201ENST00000217999 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
RHOXF1-201ENST00000217999 RPGRIP1LQ68CZ1 1315 aa21.35■■□□□ 1.01
RHOXF1-201ENST00000217999 AMOTL2Q9Y2J4 779 aa21.35■■□□□ 1.01
RHOXF1-201ENST00000217999 PPLO60437 1756 aa21.35■■□□□ 1.01
RHOXF1-201ENST00000217999 VGFO15240 615 aaPredicted RBP21.34■■□□□ 1.01
RHOXF1-201ENST00000217999 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
RHOXF1-201ENST00000217999 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.34■■□□□ 1.01
RHOXF1-201ENST00000217999 DCCP43146 1447 aa21.33■■□□□ 1.01
RHOXF1-201ENST00000217999 PTPRUQ92729 1446 aa21.33■■□□□ 1.01
RHOXF1-201ENST00000217999 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
RHOXF1-201ENST00000217999 PHF23Q9BUL5 403 aaPredicted RBP21.32■■□□□ 1
RHOXF1-201ENST00000217999 ATF3P18847 181 aa21.31■■□□□ 1
RHOXF1-201ENST00000217999 C19orf44Q9H6X5 657 aa21.31■■□□□ 1
RHOXF1-201ENST00000217999 SLAIN2Q9P270 581 aa21.31■■□□□ 1
RHOXF1-201ENST00000217999 PHLPP1O60346 1717 aa21.31■■□□□ 1
RHOXF1-201ENST00000217999 ILDR2Q71H61 639 aa21.3■■□□□ 1
RHOXF1-201ENST00000217999 METP08581 1390 aa21.3■■□□□ 1
RHOXF1-201ENST00000217999 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
RHOXF1-201ENST00000217999 FOXD1Q16676 465 aa21.28■■□□□ 1
RHOXF1-201ENST00000217999 SETD1AO15047 1707 aaKnown RBP21.28■■□□□ 1
RHOXF1-201ENST00000217999 PTCH1Q13635 1447 aa21.27■■□□□ 1
RHOXF1-201ENST00000217999 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
RHOXF1-201ENST00000217999 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
RHOXF1-201ENST00000217999 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
RHOXF1-201ENST00000217999 IFT172Q9UG01 1749 aa21.24■□□□□ 0.99
RHOXF1-201ENST00000217999 AHDC1Q5TGY3 1603 aaPredicted RBP21.23■□□□□ 0.99
RHOXF1-201ENST00000217999 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
RHOXF1-201ENST00000217999 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
RHOXF1-201ENST00000217999 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
RHOXF1-201ENST00000217999 SOCS7O14512 581 aa21.22■□□□□ 0.99
RHOXF1-201ENST00000217999 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
RHOXF1-201ENST00000217999 JCADQ9P266 1359 aa21.21■□□□□ 0.99
RHOXF1-201ENST00000217999 ASXL1Q8IXJ9 1541 aa21.18■□□□□ 0.98
RHOXF1-201ENST00000217999 RGL3Q3MIN7 710 aa21.17■□□□□ 0.98
RHOXF1-201ENST00000217999 MST1RQ04912 1400 aa21.17■□□□□ 0.98
RHOXF1-201ENST00000217999 LAMC1P11047 1609 aa21.15■□□□□ 0.98
RHOXF1-201ENST00000217999 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
RHOXF1-201ENST00000217999 PIK3C2GO75747 1445 aa21.14■□□□□ 0.98
RHOXF1-201ENST00000217999 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.97
RHOXF1-201ENST00000217999 ROBO2Q9HCK4 1378 aa21.13■□□□□ 0.97
RHOXF1-201ENST00000217999 KNDC1Q76NI1 1749 aa21.13■□□□□ 0.97
RHOXF1-201ENST00000217999 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
RHOXF1-201ENST00000217999 MYOM2P54296 1465 aa21.13■□□□□ 0.97
RHOXF1-201ENST00000217999 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
RHOXF1-201ENST00000217999 CDC42BPGQ6DT37 1551 aa21.11■□□□□ 0.97
RHOXF1-201ENST00000217999 SPATA31A6Q5VVP1 1343 aa21.11■□□□□ 0.97
RHOXF1-201ENST00000217999 TECPR2O15040 1411 aa21.1■□□□□ 0.97
RHOXF1-201ENST00000217999 HRCP23327 699 aa21.08■□□□□ 0.97
RHOXF1-201ENST00000217999 LRPPRCP42704 1394 aaKnown RBP21.08■□□□□ 0.96
RHOXF1-201ENST00000217999 C1orf167Q5SNV9 1468 aa21.07■□□□□ 0.96
RHOXF1-201ENST00000217999 NRXN1Q9ULB1 1477 aa21.07■□□□□ 0.96
RHOXF1-201ENST00000217999 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
RHOXF1-201ENST00000217999 ABCC11Q96J66 1382 aa21.04■□□□□ 0.96
RHOXF1-201ENST00000217999 YTHDC2Q9H6S0 1430 aaKnown RBP21.04■□□□□ 0.96
RHOXF1-201ENST00000217999 STK26Q9P289 416 aa21.02■□□□□ 0.96
RHOXF1-201ENST00000217999 LRP6O75581 1613 aa21.01■□□□□ 0.95
RHOXF1-201ENST00000217999 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
RHOXF1-201ENST00000217999 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
RHOXF1-201ENST00000217999 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms