RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 TMEM131LA2VDJ0 1609 aa30.43■■■□□ 2.46
SYNGR1-201ENST00000216155 NKTRP30414 1462 aaKnown RBP30.43■■■□□ 2.46
SYNGR1-201ENST00000216155 E9PCH4 1651 aa30.4■■■□□ 2.46
SYNGR1-201ENST00000216155 PHF23Q9BUL5 403 aaPredicted RBP30.4■■■□□ 2.46
SYNGR1-201ENST00000216155 ROCK1Q13464 1354 aa30.4■■■□□ 2.46
SYNGR1-201ENST00000216155 FAM135BQ49AJ0 1406 aa30.39■■■□□ 2.45
SYNGR1-201ENST00000216155 IQGAP3Q86VI3 1631 aa30.38■■■□□ 2.45
SYNGR1-201ENST00000216155 PLEKHG1Q9ULL1 1385 aa30.37■■■□□ 2.45
SYNGR1-201ENST00000216155 RIMS2Q9UQ26 1411 aa30.37■■■□□ 2.45
SYNGR1-201ENST00000216155 RBM33Q96EV2 1170 aaKnown RBP30.35■■■□□ 2.45
SYNGR1-201ENST00000216155 ROBO1Q9Y6N7 1651 aa30.34■■■□□ 2.45
SYNGR1-201ENST00000216155 PROSER2Q86WR7 435 aaPredicted RBP30.34■■■□□ 2.45
SYNGR1-201ENST00000216155 BCANQ96GW7 911 aa30.32■■■□□ 2.44
SYNGR1-201ENST00000216155 CHD2O14647 1828 aaKnown RBP30.31■■■□□ 2.44
SYNGR1-201ENST00000216155 PPP1R15AO75807 674 aaPredicted RBP30.29■■■□□ 2.44
SYNGR1-201ENST00000216155 MSH6P52701 1360 aa30.26■■■□□ 2.43
SYNGR1-201ENST00000216155 HDGFP51858 240 aaKnown RBP30.24■■■□□ 2.43
SYNGR1-201ENST00000216155 ADAMTS13Q76LX8 1427 aa30.23■■■□□ 2.43
SYNGR1-201ENST00000216155 CHGAP10645 457 aaKnown RBP30.23■■■□□ 2.43
SYNGR1-201ENST00000216155 NUP155O75694 1391 aa30.23■■■□□ 2.43
SYNGR1-201ENST00000216155 DIP2AQ14689 1571 aa30.23■■■□□ 2.43
SYNGR1-201ENST00000216155 ITGAEP38570 1179 aa30.2■■■□□ 2.43
SYNGR1-201ENST00000216155 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.2■■■□□ 2.43
SYNGR1-201ENST00000216155 RGS17Q9UGC6 210 aaPredicted RBP30.2■■■□□ 2.43
SYNGR1-201ENST00000216155 TBX22Q9Y458 520 aa30.2■■■□□ 2.43
SYNGR1-201ENST00000216155 NUTM2DQ5VT03 806 aaPredicted RBP30.18■■■□□ 2.42
SYNGR1-201ENST00000216155 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
SYNGR1-201ENST00000216155 PHLPP1O60346 1717 aa30.15■■■□□ 2.42
SYNGR1-201ENST00000216155 SPHKAPQ2M3C7 1700 aa30.15■■■□□ 2.42
SYNGR1-201ENST00000216155 NCOA3Q9Y6Q9 1424 aa30.14■■■□□ 2.42
SYNGR1-201ENST00000216155 SLAIN2Q9P270 581 aa30.14■■■□□ 2.42
SYNGR1-201ENST00000216155 PIK3R4Q99570 1358 aa30.14■■■□□ 2.41
SYNGR1-201ENST00000216155 TRPM2O94759 1503 aa30.12■■■□□ 2.41
SYNGR1-201ENST00000216155 NRXN3Q9Y4C0 1643 aa30.09■■■□□ 2.41
SYNGR1-201ENST00000216155 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.08■■■□□ 2.41
SYNGR1-201ENST00000216155 COL16A1Q07092 1604 aaPredicted RBP30.08■■■□□ 2.41
SYNGR1-201ENST00000216155 PTPRUQ92729 1446 aa30.06■■■□□ 2.4
SYNGR1-201ENST00000216155 SETBP1Q9Y6X0 1596 aa30.06■■■□□ 2.4
SYNGR1-201ENST00000216155 C14orf37Q86TY3 774 aa30.04■■■□□ 2.4
SYNGR1-201ENST00000216155 RRBP1Q9P2E9 1410 aaKnown RBP30.04■■■□□ 2.4
SYNGR1-201ENST00000216155 JCADQ9P266 1359 aa30.03■■■□□ 2.4
SYNGR1-201ENST00000216155 XRN1Q8IZH2 1706 aaKnown RBP30.03■■■□□ 2.4
SYNGR1-201ENST00000216155 CLTCL1P53675 1640 aa30.01■■■□□ 2.39
SYNGR1-201ENST00000216155 AHDC1Q5TGY3 1603 aaPredicted RBP30■■■□□ 2.39
SYNGR1-201ENST00000216155 POTEAQ6S8J7 498 aa30■■■□□ 2.39
SYNGR1-201ENST00000216155 CADPS2Q86UW7 1296 aa29.99■■■□□ 2.39
SYNGR1-201ENST00000216155 C19orf44Q9H6X5 657 aa29.99■■■□□ 2.39
SYNGR1-201ENST00000216155 AMOTL2Q9Y2J4 779 aa29.99■■■□□ 2.39
SYNGR1-201ENST00000216155 NAIPQ13075 1403 aa29.97■■■□□ 2.39
SYNGR1-201ENST00000216155 NEXMIFQ5QGS0 1516 aa29.96■■■□□ 2.39
SYNGR1-201ENST00000216155 ATF3P18847 181 aa29.95■■■□□ 2.39
SYNGR1-201ENST00000216155 ZNF326Q5BKZ1 582 aaKnown RBP29.94■■■□□ 2.38
SYNGR1-201ENST00000216155 DCCP43146 1447 aa29.94■■■□□ 2.38
SYNGR1-201ENST00000216155 LRP6O75581 1613 aa29.93■■■□□ 2.38
SYNGR1-201ENST00000216155 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
SYNGR1-201ENST00000216155 METP08581 1390 aa29.91■■■□□ 2.38
SYNGR1-201ENST00000216155 KIF1BO60333 1816 aa29.89■■■□□ 2.38
SYNGR1-201ENST00000216155 BRINP3Q76B58 766 aa29.87■■■□□ 2.37
SYNGR1-201ENST00000216155 SPATA31A6Q5VVP1 1343 aa29.87■■■□□ 2.37
SYNGR1-201ENST00000216155 ASXL1Q8IXJ9 1541 aa29.86■■■□□ 2.37
SYNGR1-201ENST00000216155 SETD1AO15047 1707 aaKnown RBP29.85■■■□□ 2.37
SYNGR1-201ENST00000216155 MST1RQ04912 1400 aa29.85■■■□□ 2.37
SYNGR1-201ENST00000216155 HFM1A2PYH4 1435 aa29.84■■■□□ 2.37
SYNGR1-201ENST00000216155 NALCNQ8IZF0 1738 aa29.83■■■□□ 2.37
SYNGR1-201ENST00000216155 ADGRL3Q9HAR2 1447 aa29.82■■■□□ 2.36
SYNGR1-201ENST00000216155 NHSL1Q5SYE7 1610 aa29.82■■■□□ 2.36
SYNGR1-201ENST00000216155 MEX3CQ5U5Q3 659 aaKnown RBP29.76■■■□□ 2.35
SYNGR1-201ENST00000216155 SETD5Q9C0A6 1442 aa29.75■■■□□ 2.35
SYNGR1-201ENST00000216155 PTCH1Q13635 1447 aa29.74■■■□□ 2.35
SYNGR1-201ENST00000216155 TRIM52Q96A61 297 aa29.74■■■□□ 2.35
SYNGR1-201ENST00000216155 PPLO60437 1756 aa29.72■■■□□ 2.35
SYNGR1-201ENST00000216155 SLC4A1APQ9BWU0 796 aaKnown RBP29.7■■■□□ 2.35
SYNGR1-201ENST00000216155 PRAG1Q86YV5 1406 aa29.7■■■□□ 2.34
SYNGR1-201ENST00000216155 ZNF772Q68DY9 489 aaPredicted RBP29.69■■■□□ 2.34
SYNGR1-201ENST00000216155 VGFO15240 615 aaPredicted RBP29.68■■■□□ 2.34
SYNGR1-201ENST00000216155 ROBO2Q9HCK4 1378 aa29.67■■■□□ 2.34
SYNGR1-201ENST00000216155 NUTM2BA6NNL0 878 aaPredicted RBP29.66■■■□□ 2.34
SYNGR1-201ENST00000216155 NUTM2EB1AL46 878 aaPredicted RBP29.66■■■□□ 2.34
SYNGR1-201ENST00000216155 NUTM2AQ8IVF1 878 aaPredicted RBP29.66■■■□□ 2.34
SYNGR1-201ENST00000216155 DDX17Q92841 729 aaKnown RBP29.66■■■□□ 2.34
SYNGR1-201ENST00000216155 C1orf167Q5SNV9 1468 aa29.66■■■□□ 2.34
SYNGR1-201ENST00000216155 RPGRIP1LQ68CZ1 1315 aa29.65■■■□□ 2.34
SYNGR1-201ENST00000216155 LAMC1P11047 1609 aa29.63■■■□□ 2.33
SYNGR1-201ENST00000216155 LRRC59Q96AG4 307 aaKnown RBP29.62■■■□□ 2.33
SYNGR1-201ENST00000216155 PNPLA6Q8IY17 1366 aa29.62■■■□□ 2.33
SYNGR1-201ENST00000216155 FOXD1Q16676 465 aa29.59■■■□□ 2.33
SYNGR1-201ENST00000216155 AFF2P51816 1311 aa29.57■■■□□ 2.32
SYNGR1-201ENST00000216155 CDK12Q9NYV4 1490 aaPredicted RBP29.55■■■□□ 2.32
SYNGR1-201ENST00000216155 CCDC144AA2RUR9 1427 aa29.54■■■□□ 2.32
SYNGR1-201ENST00000216155 IFT172Q9UG01 1749 aa29.54■■■□□ 2.32
SYNGR1-201ENST00000216155 RXRBP28702 533 aa29.53■■■□□ 2.32
SYNGR1-201ENST00000216155 SPATA31E1Q6ZUB1 1445 aa29.53■■■□□ 2.32
SYNGR1-201ENST00000216155 CDC42BPGQ6DT37 1551 aa29.52■■■□□ 2.32
SYNGR1-201ENST00000216155 ORAI2Q96SN7 254 aa29.52■■■□□ 2.32
SYNGR1-201ENST00000216155 SOS2Q07890 1332 aaPredicted RBP29.5■■■□□ 2.31
SYNGR1-201ENST00000216155 ADGRF5Q8IZF2 1346 aa29.5■■■□□ 2.31
SYNGR1-201ENST00000216155 C8orf37Q96NL8 207 aa29.5■■■□□ 2.31
SYNGR1-201ENST00000216155 UPF1Q92900 1129 aaKnown RBP eCLIP29.48■■■□□ 2.31
SYNGR1-201ENST00000216155 TECPR2O15040 1411 aa29.46■■■□□ 2.31
SYNGR1-201ENST00000216155 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms