RNA–Protein interactions for RNA: ENST00000211921.11

LST1-201, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-201ENST00000211921 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.34
LST1-201ENST00000211921 NAIPQ13075 1403 aa17.2■□□□□ 0.34
LST1-201ENST00000211921 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
LST1-201ENST00000211921 ZFYVE9O95405 1425 aa17.19■□□□□ 0.34
LST1-201ENST00000211921 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
LST1-201ENST00000211921 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
LST1-201ENST00000211921 KIF1BO60333 1816 aa17.17■□□□□ 0.34
LST1-201ENST00000211921 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
LST1-201ENST00000211921 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.16■□□□□ 0.34
LST1-201ENST00000211921 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
LST1-201ENST00000211921 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
LST1-201ENST00000211921 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
LST1-201ENST00000211921 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
LST1-201ENST00000211921 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
LST1-201ENST00000211921 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
LST1-201ENST00000211921 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
LST1-201ENST00000211921 TRPM2O94759 1503 aa17.13■□□□□ 0.33
LST1-201ENST00000211921 CLTCL1P53675 1640 aa17.13■□□□□ 0.33
LST1-201ENST00000211921 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
LST1-201ENST00000211921 KCNA6P17658 529 aa17.12■□□□□ 0.33
LST1-201ENST00000211921 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
LST1-201ENST00000211921 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
LST1-201ENST00000211921 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
LST1-201ENST00000211921 HSPA1LP34931 641 aa17.09■□□□□ 0.33
LST1-201ENST00000211921 NUTM2DQ5VT03 806 aaPredicted RBP17.09■□□□□ 0.33
LST1-201ENST00000211921 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
LST1-201ENST00000211921 MSH6P52701 1360 aa17.05■□□□□ 0.32
LST1-201ENST00000211921 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
LST1-201ENST00000211921 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
LST1-201ENST00000211921 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
LST1-201ENST00000211921 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
LST1-201ENST00000211921 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
LST1-201ENST00000211921 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
LST1-201ENST00000211921 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
LST1-201ENST00000211921 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
LST1-201ENST00000211921 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
LST1-201ENST00000211921 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
LST1-201ENST00000211921 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
LST1-201ENST00000211921 PPLO60437 1756 aa16.99■□□□□ 0.31
LST1-201ENST00000211921 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
LST1-201ENST00000211921 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
LST1-201ENST00000211921 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
LST1-201ENST00000211921 ACIN1Q9UKV3 1341 aaKnown RBP16.96■□□□□ 0.31
LST1-201ENST00000211921 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
LST1-201ENST00000211921 PHLPP1O60346 1717 aa16.96■□□□□ 0.3
LST1-201ENST00000211921 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
LST1-201ENST00000211921 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
LST1-201ENST00000211921 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
LST1-201ENST00000211921 VGFO15240 615 aaPredicted RBP16.93■□□□□ 0.3
LST1-201ENST00000211921 ATF3P18847 181 aa16.93■□□□□ 0.3
LST1-201ENST00000211921 FOXD1Q16676 465 aa16.93■□□□□ 0.3
LST1-201ENST00000211921 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
LST1-201ENST00000211921 MPHOSPH9Q99550 1183 aa16.92■□□□□ 0.3
LST1-201ENST00000211921 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
LST1-201ENST00000211921 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
LST1-201ENST00000211921 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
LST1-201ENST00000211921 IFT172Q9UG01 1749 aa16.91■□□□□ 0.3
LST1-201ENST00000211921 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
LST1-201ENST00000211921 METP08581 1390 aa16.9■□□□□ 0.3
LST1-201ENST00000211921 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
LST1-201ENST00000211921 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
LST1-201ENST00000211921 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
LST1-201ENST00000211921 DCCP43146 1447 aa16.88■□□□□ 0.29
LST1-201ENST00000211921 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
LST1-201ENST00000211921 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
LST1-201ENST00000211921 COL16A1Q07092 1604 aaPredicted RBP16.85■□□□□ 0.29
LST1-201ENST00000211921 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
LST1-201ENST00000211921 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
LST1-201ENST00000211921 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
LST1-201ENST00000211921 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
LST1-201ENST00000211921 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
LST1-201ENST00000211921 SOCS7O14512 581 aa16.82■□□□□ 0.28
LST1-201ENST00000211921 LAMC1P11047 1609 aa16.81■□□□□ 0.28
LST1-201ENST00000211921 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
LST1-201ENST00000211921 JCADQ9P266 1359 aa16.8■□□□□ 0.28
LST1-201ENST00000211921 MST1RQ04912 1400 aa16.79■□□□□ 0.28
LST1-201ENST00000211921 SHPRHQ149N8 1683 aa16.79■□□□□ 0.28
LST1-201ENST00000211921 NHSL1Q5SYE7 1610 aa16.79■□□□□ 0.28
LST1-201ENST00000211921 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
LST1-201ENST00000211921 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
LST1-201ENST00000211921 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
LST1-201ENST00000211921 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
LST1-201ENST00000211921 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
LST1-201ENST00000211921 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
LST1-201ENST00000211921 MYOM2P54296 1465 aa16.75■□□□□ 0.27
LST1-201ENST00000211921 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
LST1-201ENST00000211921 STK26Q9P289 416 aa16.73■□□□□ 0.27
LST1-201ENST00000211921 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
LST1-201ENST00000211921 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
LST1-201ENST00000211921 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
LST1-201ENST00000211921 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.27
LST1-201ENST00000211921 TECPR2O15040 1411 aa16.7■□□□□ 0.26
LST1-201ENST00000211921 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
LST1-201ENST00000211921 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
LST1-201ENST00000211921 HRCP23327 699 aa16.69■□□□□ 0.26
LST1-201ENST00000211921 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
LST1-201ENST00000211921 LRP6O75581 1613 aa16.67■□□□□ 0.26
LST1-201ENST00000211921 ABCC11Q96J66 1382 aa16.67■□□□□ 0.26
LST1-201ENST00000211921 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
LST1-201ENST00000211921 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms