RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 RAD21O60216 631 aa20.91■□□□□ 0.94
ITGB4-201ENST00000200181 NAP1L1P55209 391 aaKnown RBP20.91■□□□□ 0.94
ITGB4-201ENST00000200181 NOL10Q9BSC4 688 aaKnown RBP20.9■□□□□ 0.94
ITGB4-201ENST00000200181 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
ITGB4-201ENST00000200181 FBXW7Q969H0 707 aa20.89■□□□□ 0.93
ITGB4-201ENST00000200181 COG6Q9Y2V7 657 aa20.89■□□□□ 0.93
ITGB4-201ENST00000200181 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.93
ITGB4-201ENST00000200181 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
ITGB4-201ENST00000200181 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
ITGB4-201ENST00000200181 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
ITGB4-201ENST00000200181 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
ITGB4-201ENST00000200181 VPS37CA5D8V6 355 aaPredicted RBP20.87■□□□□ 0.93
ITGB4-201ENST00000200181 MAP7D2Q96T17 732 aa20.86■□□□□ 0.93
ITGB4-201ENST00000200181 APPP05067 770 aa20.86■□□□□ 0.93
ITGB4-201ENST00000200181 RNF20Q5VTR2 975 aa20.86■□□□□ 0.93
ITGB4-201ENST00000200181 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
ITGB4-201ENST00000200181 DHX16O60231 1041 aaKnown RBP20.86■□□□□ 0.93
ITGB4-201ENST00000200181 IFIT2P09913 472 aaKnown RBP20.86■□□□□ 0.93
ITGB4-201ENST00000200181 SMC3Q9UQE7 1217 aa20.86■□□□□ 0.93
ITGB4-201ENST00000200181 C1orf141Q5JVX7 400 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-201ENST00000200181 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-201ENST00000200181 NUCB2P80303 420 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 R3HCC1Q9Y3T6 440 aaKnown RBP20.85■□□□□ 0.93
ITGB4-201ENST00000200181 CUX2O14529 1486 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 TRDNQ13061 729 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 CT47A1Q5JQC4 288 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-201ENST00000200181 CCDC73Q6ZRK6 1079 aa20.85■□□□□ 0.93
ITGB4-201ENST00000200181 NFXL1Q6ZNB6 911 aa20.84■□□□□ 0.93
ITGB4-201ENST00000200181 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
ITGB4-201ENST00000200181 DDX19BQ9UMR2 479 aa20.84■□□□□ 0.93
ITGB4-201ENST00000200181 C9orf78Q9NZ63 289 aaPredicted RBP20.83■□□□□ 0.93
ITGB4-201ENST00000200181 DCTN1Q14203 1278 aa20.83■□□□□ 0.93
ITGB4-201ENST00000200181 CWC15Q9P013 229 aaKnown RBP20.83■□□□□ 0.93
ITGB4-201ENST00000200181 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
ITGB4-201ENST00000200181 CCDC39Q9UFE4 941 aa20.82■□□□□ 0.92
ITGB4-201ENST00000200181 H0YHG0 523 aa20.82■□□□□ 0.92
ITGB4-201ENST00000200181 PANK3Q9H999 370 aa20.82■□□□□ 0.92
ITGB4-201ENST00000200181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.81■□□□□ 0.92
ITGB4-201ENST00000200181 ODF2Q5BJF6 829 aa20.81■□□□□ 0.92
ITGB4-201ENST00000200181 KRI1Q8N9T8 703 aaKnown RBP20.81■□□□□ 0.92
ITGB4-201ENST00000200181 ERICH2A1L162 156 aa20.81■□□□□ 0.92
ITGB4-201ENST00000200181 CCDC43Q96MW1 224 aaKnown RBP20.81■□□□□ 0.92
ITGB4-201ENST00000200181 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
ITGB4-201ENST00000200181 KIF3BO15066 747 aa20.8■□□□□ 0.92
ITGB4-201ENST00000200181 FOSBP53539 338 aa20.8■□□□□ 0.92
ITGB4-201ENST00000200181 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
ITGB4-201ENST00000200181 CAGE1Q8TC20 777 aa20.8■□□□□ 0.92
ITGB4-201ENST00000200181 ERCC4Q92889 916 aaPredicted RBP20.8■□□□□ 0.92
ITGB4-201ENST00000200181 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
ITGB4-201ENST00000200181 NUTM2FA1L443 756 aa20.79■□□□□ 0.92
ITGB4-201ENST00000200181 MTERF4Q7Z6M4 381 aaKnown RBP20.79■□□□□ 0.92
ITGB4-201ENST00000200181 CCDC173Q0VFZ6 552 aa20.79■□□□□ 0.92
ITGB4-201ENST00000200181 TRAK1Q9UPV9 953 aa20.79■□□□□ 0.92
ITGB4-201ENST00000200181 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
ITGB4-201ENST00000200181 RDXP35241 583 aaKnown RBP20.79■□□□□ 0.92
ITGB4-201ENST00000200181 SAFBQ15424 915 aaKnown RBP eCLIP20.79■□□□□ 0.92
ITGB4-201ENST00000200181 TEFQ10587 303 aa20.78■□□□□ 0.92
ITGB4-201ENST00000200181 NGEFQ8N5V2 710 aa20.78■□□□□ 0.92
ITGB4-201ENST00000200181 OLFM4Q6UX06 510 aa20.78■□□□□ 0.92
ITGB4-201ENST00000200181 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
ITGB4-201ENST00000200181 NAT10Q9H0A0 1025 aaKnown RBP20.78■□□□□ 0.92
ITGB4-201ENST00000200181 COG3Q96JB2 828 aa20.77■□□□□ 0.92
ITGB4-201ENST00000200181 PDILTQ8N807 584 aa20.77■□□□□ 0.92
ITGB4-201ENST00000200181 ROCK1Q13464 1354 aa20.77■□□□□ 0.92
ITGB4-201ENST00000200181 HSP90AB2PQ58FF8 381 aa20.77■□□□□ 0.92
ITGB4-201ENST00000200181 TTC5Q8N0Z6 440 aa20.77■□□□□ 0.92
ITGB4-201ENST00000200181 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.91
ITGB4-201ENST00000200181 CARMIL2Q6F5E8 1435 aa20.76■□□□□ 0.91
ITGB4-201ENST00000200181 SOGA1O94964 1423 aa20.76■□□□□ 0.91
ITGB4-201ENST00000200181 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
ITGB4-201ENST00000200181 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
ITGB4-201ENST00000200181 PKNOX2Q96KN3 472 aa20.75■□□□□ 0.91
ITGB4-201ENST00000200181 NASPP49321 788 aaPredicted RBP20.75■□□□□ 0.91
ITGB4-201ENST00000200181 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.91
ITGB4-201ENST00000200181 CCDC66A2RUB6 948 aa20.75■□□□□ 0.91
ITGB4-201ENST00000200181 MRE11P49959 708 aa20.74■□□□□ 0.91
ITGB4-201ENST00000200181 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
ITGB4-201ENST00000200181 EPS15P42566 896 aa20.74■□□□□ 0.91
ITGB4-201ENST00000200181 OFD1O75665 1012 aa20.74■□□□□ 0.91
ITGB4-201ENST00000200181 MYO6Q9UM54 1294 aa20.73■□□□□ 0.91
ITGB4-201ENST00000200181 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
ITGB4-201ENST00000200181 ZFYVE27Q5T4F4 411 aa20.72■□□□□ 0.91
ITGB4-201ENST00000200181 ST20-MTHFSA0A0A6YYL1 179 aa20.72■□□□□ 0.91
ITGB4-201ENST00000200181 C22orf23Q9BZE7 217 aa20.72■□□□□ 0.91
ITGB4-201ENST00000200181 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
ITGB4-201ENST00000200181 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
ITGB4-201ENST00000200181 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.91
ITGB4-201ENST00000200181 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
ITGB4-201ENST00000200181 APAF1O14727 1248 aa20.7■□□□□ 0.9
ITGB4-201ENST00000200181 ERC2O15083 957 aa20.7■□□□□ 0.9
ITGB4-201ENST00000200181 NFKBIBQ15653 356 aa20.69■□□□□ 0.9
ITGB4-201ENST00000200181 PLCD4Q9BRC7 762 aa20.69■□□□□ 0.9
ITGB4-201ENST00000200181 BRMS1Q9HCU9 246 aa20.69■□□□□ 0.9
ITGB4-201ENST00000200181 HNRNPMP52272 730 aaKnown RBP eCLIP20.69■□□□□ 0.9
ITGB4-201ENST00000200181 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
ITGB4-201ENST00000200181 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
ITGB4-201ENST00000200181 SKIDA1Q1XH10 827 aa20.68■□□□□ 0.9
ITGB4-201ENST00000200181 LETM1O95202 739 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms