RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 PBRM1Q86U86 1689 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 MAPK8IP3Q9UPT6 1336 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 ERBINQ96RT1 1412 aa14.22□□□□□ -0.13
ACTN1-201ENST00000193403 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
ACTN1-201ENST00000193403 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
ACTN1-201ENST00000193403 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.14
ACTN1-201ENST00000193403 ITPRIPQ8IWB1 547 aa14.21□□□□□ -0.14
ACTN1-201ENST00000193403 ARID3AQ99856 593 aa14.21□□□□□ -0.14
ACTN1-201ENST00000193403 SAMD9Q5K651 1589 aa14.2□□□□□ -0.14
ACTN1-201ENST00000193403 U2AF1L5P0DN76 240 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-201ENST00000193403 U2AF1Q01081 240 aaKnown RBP eCLIP14.2□□□□□ -0.14
ACTN1-201ENST00000193403 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
ACTN1-201ENST00000193403 STK26Q9P289 416 aa14.2□□□□□ -0.14
ACTN1-201ENST00000193403 PDZRN3Q9UPQ7 1066 aa14.2□□□□□ -0.14
ACTN1-201ENST00000193403 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
ACTN1-201ENST00000193403 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
ACTN1-201ENST00000193403 RWDD1Q9H446 243 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-201ENST00000193403 TNNQ9UQP3 1299 aa14.19□□□□□ -0.14
ACTN1-201ENST00000193403 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
ACTN1-201ENST00000193403 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
ACTN1-201ENST00000193403 TESK2Q96S53 571 aa14.18□□□□□ -0.14
ACTN1-201ENST00000193403 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
ACTN1-201ENST00000193403 PANK2Q9BZ23 570 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 SMC4Q9NTJ3 1288 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 GPATCH8Q9UKJ3 1502 aaKnown RBP14.17□□□□□ -0.14
ACTN1-201ENST00000193403 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
ACTN1-201ENST00000193403 LRRIQ1Q96JM4 1722 aa14.16□□□□□ -0.14
ACTN1-201ENST00000193403 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
ACTN1-201ENST00000193403 SOX12O15370 315 aa14.15□□□□□ -0.14
ACTN1-201ENST00000193403 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
ACTN1-201ENST00000193403 DISP1Q96F81 1524 aa14.15□□□□□ -0.14
ACTN1-201ENST00000193403 KIF3BO15066 747 aa14.15□□□□□ -0.14
ACTN1-201ENST00000193403 HSP90AA2PQ14568 343 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-201ENST00000193403 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-201ENST00000193403 TBC1D2Q9BYX2 928 aa14.14□□□□□ -0.15
ACTN1-201ENST00000193403 KDM5CP41229 1560 aa14.14□□□□□ -0.15
ACTN1-201ENST00000193403 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
ACTN1-201ENST00000193403 TRAK2O60296 914 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 UBE2Q2Q8WVN8 375 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 TCP11L2Q8N4U5 519 aa14.13□□□□□ -0.15
ACTN1-201ENST00000193403 APBB1O00213 710 aa14.12□□□□□ -0.15
ACTN1-201ENST00000193403 KIF14Q15058 1648 aa14.12□□□□□ -0.15
ACTN1-201ENST00000193403 TSR2Q969E8 191 aaKnown RBP14.11□□□□□ -0.15
ACTN1-201ENST00000193403 MCM4P33991 863 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 AMER1Q5JTC6 1135 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-201ENST00000193403 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 CHMP5Q9NZZ3 219 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
ACTN1-201ENST00000193403 SPAG9O60271 1321 aaKnown RBP14.09□□□□□ -0.15
ACTN1-201ENST00000193403 UHRF1BP1Q6BDS2 1440 aa14.09□□□□□ -0.15
ACTN1-201ENST00000193403 XRCC6P12956 609 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-201ENST00000193403 ATP10BO94823 1461 aa14.08□□□□□ -0.15
ACTN1-201ENST00000193403 MBD5Q9P267 1494 aa14.08□□□□□ -0.15
ACTN1-201ENST00000193403 GOLGA6L22H0YM25 854 aa14.08□□□□□ -0.16
ACTN1-201ENST00000193403 RLBP1P12271 317 aa14.08□□□□□ -0.16
ACTN1-201ENST00000193403 NUP160Q12769 1436 aa14.08□□□□□ -0.16
ACTN1-201ENST00000193403 NKTRP30414 1462 aaKnown RBP14.08□□□□□ -0.16
ACTN1-201ENST00000193403 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-201ENST00000193403 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
ACTN1-201ENST00000193403 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
ACTN1-201ENST00000193403 SRPK2P78362 688 aaKnown RBP14.07□□□□□ -0.16
ACTN1-201ENST00000193403 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
ACTN1-201ENST00000193403 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
ACTN1-201ENST00000193403 MTHFSP49914 203 aa14.07□□□□□ -0.16
ACTN1-201ENST00000193403 SLC12A5Q9H2X9 1139 aa14.07□□□□□ -0.16
ACTN1-201ENST00000193403 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-201ENST00000193403 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
ACTN1-201ENST00000193403 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
ACTN1-201ENST00000193403 GBP4Q96PP9 640 aa14.05□□□□□ -0.16
ACTN1-201ENST00000193403 PLEKHH2Q8IVE3 1493 aa14.05□□□□□ -0.16
ACTN1-201ENST00000193403 RSPH4AQ5TD94 716 aa14.05□□□□□ -0.16
ACTN1-201ENST00000193403 FOXD4L5Q5VV16 416 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-201ENST00000193403 FOXD4L4Q8WXT5 416 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-201ENST00000193403 KIAA0556O60303 1618 aa14.05□□□□□ -0.16
ACTN1-201ENST00000193403 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
ACTN1-201ENST00000193403 TBC1D32Q96NH3 1257 aa14.04□□□□□ -0.16
ACTN1-201ENST00000193403 DDX11L8A8MPP1 907 aa14.04□□□□□ -0.16
ACTN1-201ENST00000193403 ZMYM4Q5VZL5 1548 aa14.03□□□□□ -0.16
ACTN1-201ENST00000193403 ANKRD45Q5TZF3 282 aa14.03□□□□□ -0.16
ACTN1-201ENST00000193403 MSNP26038 577 aaKnown RBP14.03□□□□□ -0.16
ACTN1-201ENST00000193403 COL17A1Q9UMD9 1497 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-201ENST00000193403 MRE11P49959 708 aa14.03□□□□□ -0.16
ACTN1-201ENST00000193403 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
ACTN1-201ENST00000193403 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
ACTN1-201ENST00000193403 CHD1O14646 1710 aa14.02□□□□□ -0.16
ACTN1-201ENST00000193403 RAPGEF6Q8TEU7 1601 aa14.02□□□□□ -0.16
ACTN1-201ENST00000193403 PKNOX2Q96KN3 472 aa14.02□□□□□ -0.16
ACTN1-201ENST00000193403 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms