RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 AMOTL1Q8IY63 956 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 GSE1Q14687 1217 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 DIAPH3Q9NSV4 1193 aa15.37■□□□□ 0.05
LMCD1-201ENST00000157600 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
LMCD1-201ENST00000157600 PDE4AP27815 886 aa15.36■□□□□ 0.05
LMCD1-201ENST00000157600 SYNE3Q6ZMZ3 975 aa15.36■□□□□ 0.05
LMCD1-201ENST00000157600 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
LMCD1-201ENST00000157600 NUCB2P80303 420 aa15.35■□□□□ 0.05
LMCD1-201ENST00000157600 BECN2A8MW95 431 aa15.35■□□□□ 0.05
LMCD1-201ENST00000157600 CUL7Q14999 1698 aa15.34■□□□□ 0.05
LMCD1-201ENST00000157600 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
LMCD1-201ENST00000157600 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
LMCD1-201ENST00000157600 IPO7O95373 1038 aaKnown RBP15.34■□□□□ 0.05
LMCD1-201ENST00000157600 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
LMCD1-201ENST00000157600 TEFQ10587 303 aa15.33■□□□□ 0.05
LMCD1-201ENST00000157600 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.05
LMCD1-201ENST00000157600 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.05
LMCD1-201ENST00000157600 RUNDC1Q96C34 613 aa15.33■□□□□ 0.04
LMCD1-201ENST00000157600 CLUAP1Q96AJ1 413 aa15.33■□□□□ 0.04
LMCD1-201ENST00000157600 HFM1A2PYH4 1435 aa15.33■□□□□ 0.04
LMCD1-201ENST00000157600 G3V3G9 751 aa15.32■□□□□ 0.04
LMCD1-201ENST00000157600 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
LMCD1-201ENST00000157600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
LMCD1-201ENST00000157600 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
LMCD1-201ENST00000157600 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
LMCD1-201ENST00000157600 CCDC47Q96A33 483 aaKnown RBP15.32■□□□□ 0.04
LMCD1-201ENST00000157600 INTS3Q68E01 1043 aaKnown RBP15.32■□□□□ 0.04
LMCD1-201ENST00000157600 TRIM29Q14134 588 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
LMCD1-201ENST00000157600 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 ERC2O15083 957 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 C9orf78Q9NZ63 289 aaPredicted RBP15.31■□□□□ 0.04
LMCD1-201ENST00000157600 GNAI1P63096 354 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 CCDC7Q96M83 1385 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 TTC5Q8N0Z6 440 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
LMCD1-201ENST00000157600 DIAPH1O60610 1272 aaKnown RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
LMCD1-201ENST00000157600 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 MTERF4Q7Z6M4 381 aaKnown RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 GTF2E1P29083 439 aaPredicted RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 CHMP5Q9NZZ3 219 aa15.3■□□□□ 0.04
LMCD1-201ENST00000157600 DHX8Q14562 1220 aaKnown RBP15.3■□□□□ 0.04
LMCD1-201ENST00000157600 HMGXB3Q12766 1538 aa15.29■□□□□ 0.04
LMCD1-201ENST00000157600 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
LMCD1-201ENST00000157600 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
LMCD1-201ENST00000157600 TRDNQ13061 729 aa15.28■□□□□ 0.04
LMCD1-201ENST00000157600 MARCH6O60337 910 aa15.28■□□□□ 0.04
LMCD1-201ENST00000157600 RILPL2Q969X0 211 aa15.28■□□□□ 0.04
LMCD1-201ENST00000157600 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.27■□□□□ 0.04
LMCD1-201ENST00000157600 NAT10Q9H0A0 1025 aaKnown RBP15.27■□□□□ 0.04
LMCD1-201ENST00000157600 MCM2P49736 904 aa15.27■□□□□ 0.04
LMCD1-201ENST00000157600 TIAM1Q13009 1591 aa15.27■□□□□ 0.03
LMCD1-201ENST00000157600 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.03
LMCD1-201ENST00000157600 TEX35Q5T0J7 233 aa15.26■□□□□ 0.03
LMCD1-201ENST00000157600 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
LMCD1-201ENST00000157600 LETM1O95202 739 aaPredicted RBP15.25■□□□□ 0.03
LMCD1-201ENST00000157600 KIF7Q2M1P5 1343 aa15.25■□□□□ 0.03
LMCD1-201ENST00000157600 CPLX1O14810 134 aa15.25■□□□□ 0.03
LMCD1-201ENST00000157600 IGF1RP08069 1367 aa15.25■□□□□ 0.03
LMCD1-201ENST00000157600 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
LMCD1-201ENST00000157600 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
LMCD1-201ENST00000157600 PDIA4P13667 645 aaKnown RBP15.23■□□□□ 0.03
LMCD1-201ENST00000157600 CRBNQ96SW2 442 aa15.23■□□□□ 0.03
LMCD1-201ENST00000157600 HIP1O00291 1037 aa15.23■□□□□ 0.03
LMCD1-201ENST00000157600 PDCP20941 246 aa15.23■□□□□ 0.03
LMCD1-201ENST00000157600 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.22■□□□□ 0.03
LMCD1-201ENST00000157600 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMCD1-201ENST00000157600 PSMA5P28066 241 aa15.22■□□□□ 0.03
LMCD1-201ENST00000157600 ACBD3Q9H3P7 528 aa15.22■□□□□ 0.03
LMCD1-201ENST00000157600 SAFBQ15424 915 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMCD1-201ENST00000157600 ERICH2A1L162 156 aa15.22■□□□□ 0.03
LMCD1-201ENST00000157600 RIPK4P57078 832 aa15.22■□□□□ 0.03
LMCD1-201ENST00000157600 MAP7D2Q96T17 732 aa15.21■□□□□ 0.03
LMCD1-201ENST00000157600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.03
LMCD1-201ENST00000157600 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
LMCD1-201ENST00000157600 CDR1P51861 262 aa15.21■□□□□ 0.02
LMCD1-201ENST00000157600 SYNJ1O43426 1573 aa15.21■□□□□ 0.02
LMCD1-201ENST00000157600 ARGLU1Q9NWB6 273 aaPredicted RBP15.2■□□□□ 0.02
LMCD1-201ENST00000157600 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
LMCD1-201ENST00000157600 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
LMCD1-201ENST00000157600 PES1O00541 588 aaKnown RBP15.19■□□□□ 0.02
LMCD1-201ENST00000157600 MBD3O95983 291 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 APAF1O14727 1248 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 XBP1P17861 261 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
LMCD1-201ENST00000157600 SASS6Q6UVJ0 657 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 BRMS1Q9HCU9 246 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 CCP110O43303 1012 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 SMC3Q9UQE7 1217 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 CCDC73Q6ZRK6 1079 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 CFTRP13569 1480 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms