RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Cdc42bpgQ80UW5 1551 aa13.75□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 ErbinQ80TH2 1402 aa13.75□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Tecpr2Q3UH45 1423 aa13.74□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Srcin1Q9QWI6 1250 aa13.74□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Arid4bA2CG63 1314 aaKnown RBP13.74□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Erich6D3Z6S9 713 aa13.74□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Ofd1Q80Z25 1017 aa13.74□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Cdk5rap2Q8K389 1822 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 AatkQ80YE4 1365 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Kiaa0556Q8C753 1610 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Akap12Q9WTQ5 1684 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Gm16486A0A1D5RMD1 1434 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Gli2Q0VGT2 1544 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Tex14Q7M6U3 1450 aa13.73□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Myo3aQ8K3H5 1613 aa13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Eif5bQ05D44 1216 aaKnown RBP13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Zscan10Q3URR7 782 aa13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Inpp5dQ9ES52 1191 aa13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Efcab6Q6P1E8 1516 aa13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Clasp1Q80TV8 1535 aaKnown RBP13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Zbtb4Q5F293 982 aa13.72□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Ptch1Q61115 1434 aa13.71□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Myom2Q14BI5 1463 aa13.71□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Anp32aO35381 247 aa13.71□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Zscan21Q07231 555 aa13.71□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Ttbk1Q6PCN3 1308 aa13.71□□□□□ -0.21
Cpsf3-211ENSMUST00000222968 Tmf1B9EKI3 1091 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 AdgbG3UZ78 1657 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Sipa1l1Q8C0T5 1782 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 DnmbpQ6TXD4 1580 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Ino80Q6ZPV2 1559 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 RereQ80TZ9 1558 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Nphp4P59240 1425 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Kdm2aP59997 1161 aa13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Anp32bQ9EST5 272 aaKnown RBP13.7□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Cul9Q80TT8 1865 aa13.69□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Dip2cE9PWR4 1557 aa13.69□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Q7TT23 1179 aa13.69□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 L3mbtl2P59178 703 aa13.68□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 P3h3Q8CG70 732 aa13.68□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Stard8Q8K031 1019 aa13.68□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Stk24Q99KH8 431 aa13.67□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Kank1E9Q238 1360 aa13.66□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Gm20521D3Z5F7 333 aa13.66□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Slc4a1apE9PX68 744 aa13.66□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Fam184bQ0KK56 942 aa13.66□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Mak16Q8BGS0 296 aaKnown RBP13.65□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Nolc1E9Q5C9 702 aaKnown RBP13.65□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Uggt1Q6P5E4 1551 aa13.65□□□□□ -0.22
Cpsf3-211ENSMUST00000222968 Zfp444Q3TDV8 331 aaKnown RBP13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Gtf2e1Q9D0D5 440 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Adamts7Q68SA9 1657 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Plxnc1Q9QZC2 1574 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Kdm5aQ3UXZ9 1690 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Talpid3E9PV87 1520 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Fam71e1A1L3C1 212 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Usp40Q8BWR4 1235 aa13.63□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Erbb3Q61526 1339 aa13.62□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Srpk2O54781 681 aaKnown RBP13.62□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Ppp2r1aQ76MZ3 589 aa13.62□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Atf7ipQ7TT18 1306 aa13.62□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Fan1Q69ZT1 1020 aa13.61□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Ttc37F8VPK0 1563 aa13.61□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Mroh1E0CZ22 1640 aa13.61□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Rab3gap2Q8BMG7 1366 aa13.61□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Wdr43Q6ZQL4 677 aaKnown RBP13.61□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Ift172Q6VH22 1749 aa13.6□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 AU022751B1B0V2 589 aa13.6□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Myom1Q62234 1667 aaKnown RBP13.6□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Puf60Q3UEB3 564 aaKnown RBP13.59□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Os9Q8K2C7 672 aa13.59□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Knl1Q66JQ7 1612 aa13.58□□□□□ -0.23
Cpsf3-211ENSMUST00000222968 Yeats2Q3TUF7 1407 aa13.58□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Gprasp1Q5U4C1 1347 aa13.58□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Mink1Q9JM52 1308 aa13.58□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 MaddQ80U28 1577 aa13.56□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Ppp4r2Q0VGB7 417 aa13.56□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Ttc41Q692V3 1318 aa13.56□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 PalldQ9ET54 1408 aa13.55□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Upf2A2AT37 1269 aaKnown RBP13.54□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Skint5A7XUY5 1461 aa13.54□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Lrrc7Q80TE7 1490 aa13.54□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Esx1O88933 382 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Slc52a2Q9D8F3 450 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Kif7B7ZNG0 1348 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Synj2Q9D2G5 1434 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Cfap65Q3V0B4 1847 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 KdrP35918 1367 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 Hecw2Q6I6G8 1578 aa13.53□□□□□ -0.24
Cpsf3-211ENSMUST00000222968 InsrP15208 1372 aa13.51□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Supt16hQ920B9 1047 aa13.51□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Ahdc1Q6PAL7 1594 aaKnown RBP13.5□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Kif16bB1AVY7 1312 aa13.5□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Ppp1r18Q8BQ30 594 aa13.5□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Myt1Q8CFC2 1127 aa13.49□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Dcaf11Q91VU6 549 aa13.49□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Qser1A2BIE1 1698 aa13.49□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Eif2ak4Q9QZ05 1648 aa13.48□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Usp19Q3UJD6 1360 aa13.48□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 PtprmP28828 1452 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms