RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Q3TQI7 289 aaKnown RBP11.9□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ttll13A4Q9F6 804 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ap3b2Q9JME5 1082 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Cabp4Q8VHC5 271 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ncoa1P70365 1447 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Sall3Q62255 1320 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 PrxO55103 1391 aa11.89□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Rfx7F8VPJ6 1459 aa11.88□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Apaf1O88879 1249 aa11.88□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Trim58Q5NCC9 485 aa11.88□□□□□ -0.51
Ldlr-202ENSMUST00000213114 PtmaP26350 111 aa11.88□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Pla2r1Q62028 1487 aa11.88□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Rab3gap2Q8BMG7 1366 aa11.87□□□□□ -0.51
Ldlr-202ENSMUST00000213114 G3bp1P97855 465 aaKnown RBP11.87□□□□□ -0.51
Ldlr-202ENSMUST00000213114 AU015836B2RUM3 263 aa11.87□□□□□ -0.51
Ldlr-202ENSMUST00000213114 BC005561E9Q5E2 1589 aa11.86□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Atp2b2Q9R0K7 1198 aa11.86□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ggt6Q6PDE7 497 aa11.86□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ak7Q9D2H2 614 aa11.86□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Sart3Q9JLI8 962 aaKnown RBP11.86□□□□□ -0.51
Ldlr-202ENSMUST00000213114 CatipB9EKE5 520 aa11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Gsto1O09131 240 aa11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Afap1Q80YS6 731 aa11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Eif2s2Q99L45 331 aaKnown RBP11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Gtf3c3Q3TMP1 882 aa11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Stk31Q99MW1 1018 aa11.85□□□□□ -0.51
Ldlr-202ENSMUST00000213114 PxdnQ3UQ28 1475 aa11.84□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Plekhh1Q80TI1 1356 aa11.84□□□□□ -0.51
Ldlr-202ENSMUST00000213114 Ccdc146E9Q9F7 977 aa11.83□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Nup160Q9Z0W3 1402 aaKnown RBP11.83□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Mlh3A0A1Y7VMP7 1443 aa11.82□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Nectin2P32507 530 aa11.82□□□□□ -0.52
Ldlr-202ENSMUST00000213114 KarsQ99MN1 595 aaKnown RBP11.82□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Nutm1Q8BHP2 1126 aa11.81□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Magi3Q9EQJ9 1476 aa11.81□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Pik3c2gO70167 1506 aa11.81□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Gm21190A0A0G2JGJ6 266 aa11.81□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Polr3aB2RXC6 1390 aa11.81□□□□□ -0.52
Ldlr-202ENSMUST00000213114 HdgfP51859 237 aaKnown RBP11.8□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Dnttip2Q8R2M2 758 aaKnown RBP11.8□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Cc2d1aQ8K1A6 943 aa11.79□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Ttc21bQ0HA38 1315 aa11.79□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Ylpm1Q9R0I7 1386 aaKnown RBP11.78□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Asxl1P59598 1514 aa11.78□□□□□ -0.52
Ldlr-202ENSMUST00000213114 WizO88286 1684 aaKnown RBP11.78□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Lrriq1Q0P5X1 1673 aa11.78□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Rbm25B2RY56 838 aaKnown RBP11.78□□□□□ -0.52
Ldlr-202ENSMUST00000213114 MccE9PWI3 1003 aa11.77□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Caskin1Q6P9K8 1431 aa11.77□□□□□ -0.52
Ldlr-202ENSMUST00000213114 Usp16Q99LG0 825 aa11.77□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Swt1Q9DBQ9 907 aa11.77□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Eif4g1Q6NZJ6 1600 aaKnown RBP11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Igf1rQ60751 1373 aa11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Ccdc183A2AJB1 534 aa11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Pbrm1Q8BSQ9 1634 aaKnown RBP11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Dusp27Q148W8 1138 aa11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Eif4g2Q62448 906 aaKnown RBP11.76□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Q8BT18 775 aa11.75□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Mre11Q61216 706 aa11.75□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Pknox2Q8BG99 474 aa11.75□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Taok2Q6ZQ29 1240 aa11.75□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Triml2E9PW10 424 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Casc1Q6TDU8 730 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Trappc8E9PWG2 1437 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Rusc2Q80U22 1514 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Cald1E9QA15 768 aaKnown RBP11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Rfx1P48377 963 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Ciz1Q8VEH2 845 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Clstn1Q9EPL2 979 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Pes1Q9EQ61 584 aaKnown RBP11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Cavin4A2AMM0 362 aa11.74□□□□□ -0.53
Ldlr-202ENSMUST00000213114 FanciQ8K368 1330 aa11.73□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Shroom2A2ALU4 1481 aa11.73□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Gnai1B2RSH2 354 aa11.73□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Atl3Q91YH5 541 aa11.73□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Gnai3Q9DC51 354 aa11.73□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Pip4k2bQ80XI4 416 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Cdk19Q8BWD8 501 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Atp10dQ8K2X1 1416 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Ric3Q8BPM6 367 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Tspyl2Q7TQI8 677 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Atp7aQ64430 1491 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Fyb1O35601 819 aa11.72□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Camsap2Q8C1B1 1461 aa11.71□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Adgrb2Q8CGM1 1561 aa11.71□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Atxn3Q9CVD2 355 aa11.71□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Erich3F6QRE9 1637 aa11.71□□□□□ -0.53
Ldlr-202ENSMUST00000213114 Arhgef40Q3UPH7 1517 aa11.71□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Brpf1B2RRD7 1212 aa11.71□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Cgnl1Q6AW69 1298 aa11.7□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Sh3bp5Q9Z131 463 aa11.7□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Fancd2Q80V62 1450 aa11.7□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Slc4a10Q5DTL9 1118 aa11.7□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Rassf8Q8CJ96 419 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Erich6bQ9D4S6 220 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 DroshaQ5HZJ0 1373 aaKnown RBP11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Wdr7Q920I9 1489 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Rapgef6Q5NCJ1 1609 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Lmtk2Q3TYD6 1471 aa11.69□□□□□ -0.54
Ldlr-202ENSMUST00000213114 Slc52a2Q9D8F3 450 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms