RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 DaxxO35613 739 aa17.73■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Cep170Q6A065 1588 aa17.73■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Fam184bQ0KK56 942 aa17.73■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Rusc2Q80U22 1514 aa17.73■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Tulp4Q9JIL5 1547 aa17.73■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Pde4cQ3UEI1 686 aa17.72■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Chmp5Q9D7S9 219 aa17.72■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Pdcd11Q6NS46 1862 aaKnown RBP17.72■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Dnajc5bQ9CQ94 199 aa17.72■□□□□ 0.43
Clcn4-203ENSMUST00000210061 NudcO35685 332 aaKnown RBP17.71■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Dbr1Q923B1 550 aa17.71■□□□□ 0.43
Clcn4-203ENSMUST00000210061 Prdm16A2A935 1275 aa17.7■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Sart3Q9JLI8 962 aaKnown RBP17.7■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Hecw1Q8K4P8 1604 aa17.7■□□□□ 0.42
Clcn4-203ENSMUST00000210061 AI481877A2ALV5 1481 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Gm14025A2AP89 1413 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 AknaQ80VW7 1404 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 4933416C03RikQ3V063 378 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Dnai1Q8C0M8 701 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Pola1P33609 1465 aa17.69■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Smc5Q8CG46 1101 aaKnown RBP17.68■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Nsd2Q8BVE8 1365 aa17.67■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Mre11Q61216 706 aa17.67■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Speer4f1Q9D5Q6 258 aa17.67■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Apbb1Q9QXJ1 710 aa17.67■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Abcc3B2RX12 1523 aa17.66■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Kdm2aP59997 1161 aa17.66■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Ppm1gQ61074 542 aa17.66■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Mapk8ip3Q9ESN9 1337 aa17.65■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Ccdc30Q8BVF4 654 aa17.64■□□□□ 0.42
Clcn4-203ENSMUST00000210061 Cdc42bpbQ7TT50 1713 aa17.64■□□□□ 0.41
Clcn4-203ENSMUST00000210061 AnkarA2RT91 1465 aa17.64■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Usp19Q3UJD6 1360 aa17.63■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Col17a1Q07563 1470 aa17.63■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Abcc6Q9R1S7 1498 aa17.62■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Erich6D3Z6S9 713 aa17.61■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Kif7B7ZNG0 1348 aa17.61■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Map3k5O35099 1380 aa17.61■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Fgd6Q69ZL1 1399 aa17.61■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Neurod2Q62414 383 aa17.6■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Dcaf11Q91VU6 549 aa17.6■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Nlrp6Q91WS2 869 aa17.6■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Usp54Q8BL06 1588 aaKnown RBP17.6■□□□□ 0.41
Clcn4-203ENSMUST00000210061 ShprhQ7TPQ3 1674 aa17.59■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Itsn2Q9Z0R6 1659 aa17.59■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Kif1bQ60575 1816 aaKnown RBP17.58■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Uggt2E9Q4X2 1504 aa17.58■□□□□ 0.41
Clcn4-203ENSMUST00000210061 Sall3Q62255 1320 aa17.58■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Kiaa1210E9Q0C6 1637 aa17.57■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Os9Q8K2C7 672 aa17.56■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Golga2Q921M4 999 aa17.56■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Gm20521D3Z5F7 333 aa17.56■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Ipo8Q7TMY7 1010 aa17.56■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Trim30dE9PWL0 497 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 NhsB1AV60 1647 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Kdm5aQ3UXZ9 1690 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Tspyl2Q7TQI8 677 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Gtf2e1Q9D0D5 440 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Ak7Q9D2H2 614 aa17.55■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Ylpm1Q9R0I7 1386 aaKnown RBP17.54■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Ralbp1Q62172 648 aa17.54■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Tmc1Q8R4P5 757 aa17.54■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Abcc1O35379 1528 aa17.53■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Eif2s2Q99L45 331 aaKnown RBP17.53■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Stard8Q8K031 1019 aa17.52■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Abca17E9PX95 1733 aa17.52■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Uspl1Q3ULM6 1089 aa17.52■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Plcd4Q8K3R3 807 aa17.52■□□□□ 0.4
Clcn4-203ENSMUST00000210061 Kiaa1107Q80TK0 1369 aa17.52■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Pdlim2Q8R1G6 349 aa17.51■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Hsp90ab1P11499 724 aaKnown RBP17.5■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Ccdc183A2AJB1 534 aa17.5■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Usp40Q8BWR4 1235 aa17.5■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Abca8bQ8K440 1620 aa17.5■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Znf521Q6KAS7 1311 aa17.5■□□□□ 0.39
Clcn4-203ENSMUST00000210061 4930567H17RikQ3V0K5 233 aa17.49■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Atp10dQ8K2X1 1416 aa17.49■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Gprasp1Q5U4C1 1347 aa17.49■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Ppp1r9bQ6R891 817 aaKnown RBP17.48■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Pank1Q8K4K6 548 aa17.48■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Gas2l2Q5SSG4 860 aa17.48■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Cep152A2AUM9 1736 aaKnown RBP17.48■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Srpk2O54781 681 aaKnown RBP17.47■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Kidins220E9Q9B7 1793 aa17.47■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Nphp4P59240 1425 aa17.46■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Trim58Q5NCC9 485 aa17.46■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Fan1Q69ZT1 1020 aa17.46■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Xrn1P97789 1719 aaKnown RBP17.46■□□□□ 0.39
Clcn4-203ENSMUST00000210061 ErbinQ80TH2 1402 aa17.46■□□□□ 0.39
Clcn4-203ENSMUST00000210061 Map4k4P97820 1233 aaKnown RBP17.45■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Myom2Q14BI5 1463 aa17.45■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Kif3bQ61771 747 aa17.44■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Ttc21bQ0HA38 1315 aa17.43■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Myom1Q62234 1667 aaKnown RBP17.43■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Myo3aQ8K3H5 1613 aa17.43■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Stk24Q99KH8 431 aa17.43■□□□□ 0.38
Clcn4-203ENSMUST00000210061 AampJ3QN89 436 aa17.42■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Rlbp1Q9Z275 317 aa17.42■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Duxf3A0A0N4SV92 674 aa17.42■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Myo5cE9Q1F5 1742 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms