RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Polr3gQ6NXY9 223 aa10.98□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Gbp4Q61107 620 aa10.98□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Fam193aQ8CGI1 1231 aaKnown RBP10.98□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Fam184aE9PW83 1143 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Otud6bQ8K2H2 294 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Mical1Q8VDP3 1048 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Map9Q3TRR0 646 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Samd1D3YXK1 519 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Spag5Q7TME2 1165 aa10.97□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Dnaaf4Q8R368 420 aa10.96□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Stk24Q99KH8 431 aa10.96□□□□□ -0.65
Ptpre-204ENSMUST00000209979 Kri1Q8VDQ9 704 aaKnown RBP10.96□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Erlin2Q8BFZ9 340 aa10.96□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Rock1P70335 1354 aa10.96□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Paxip1Q6NZQ4 1056 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Rnf214Q8BFU3 668 aaKnown RBP10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Kif27Q7M6Z4 1394 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Cnga1P29974 684 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 CastP51125 788 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Mex3cQ05A36 652 aaKnown RBP10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Phldb2Q8K1N2 1249 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Dydc1Q9D9T0 175 aa10.95□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Pdia4P08003 638 aaKnown RBP10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Cplx1P63040 134 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 TxlnbQ8VBT1 685 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Dcaf11Q91VU6 549 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Pdcl2Q78Y63 240 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Rsph6aQ8CDR2 708 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Map4P27546 1125 aaKnown RBP10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ccdc102aQ3TMW1 549 aa10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Zkscan1Q8BGS3 561 aaKnown RBP10.94□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Mcm2P97310 904 aa10.93□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Arhgap35Q91YM2 1499 aa10.93□□□□□ -0.66
Ptpre-204ENSMUST00000209979 PhaxQ9JJT9 385 aaKnown RBP10.93□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ciz1Q8VEH2 845 aa10.93□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Krt82Q99M74 516 aa10.93□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ddx11Q6AXC6 880 aa10.92□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ints3Q7TPD0 1041 aaKnown RBP10.92□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ttll13A4Q9F6 804 aa10.92□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Pip4k2aO70172 405 aa10.92□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Gse1Q3U3C9 1213 aa10.92□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Mphosph9A6H5Y1 991 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 MicalclQ9D5U9 680 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Fmn1Q05860 1466 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Cavin1O54724 392 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Kiaa0753Q6A000 959 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 ItpripQ3TNL8 555 aa10.91□□□□□ -0.66
Ptpre-204ENSMUST00000209979 PogkQ80TC5 607 aa10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Cfap99A0A140LIX9 648 aa10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 G3bp1P97855 465 aaKnown RBP10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Bag1Q60739 355 aa10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 AnlnQ8K298 1121 aaKnown RBP10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Luc7lQ9CYI4 371 aaKnown RBP10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Hoxa7P02830 229 aa10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Ctr9Q62018 1173 aaKnown RBP10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 AcrbpQ3V140 540 aa10.9□□□□□ -0.66
Ptpre-204ENSMUST00000209979 Cep162Q6ZQ06 1403 aa10.9□□□□□ -0.67
Ptpre-204ENSMUST00000209979 A0A0U1RNP2 1173 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Gm42641I6L9G2 585 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 NefhP19246 1090 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 AtripQ8BMG1 785 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Olfml1Q8BSH2 233 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Tmx4Q8C0L0 335 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Phactr2B1AVP0 632 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ppp2r3aB2RXC8 1150 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 ClasrpQ8CFC7 668 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Jakmip2D3YXK0 820 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ccdc60Q8C4J0 545 aa10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ccar2Q8VDP4 922 aaKnown RBP10.89□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ifit1bl1D3Z6F0 470 aa10.88□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Psma5Q9Z2U1 241 aaKnown RBP10.88□□□□□ -0.67
Ptpre-204ENSMUST00000209979 CenpjQ569L8 1344 aa10.88□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Srcin1Q9QWI6 1250 aa10.88□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Trim29Q8R2Q0 587 aa10.88□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Anapc15-psA0A140T8L6 141 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 LarsQ8BMJ2 1178 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Acbd3Q8BMP6 525 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 NgefQ8CHT1 710 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Hnrnpul1Q8VDM6 859 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Tubb6Q922F4 447 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Znf710Q3U288 666 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ift57Q8BXG3 429 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Washc2Q6PGL7 1334 aa10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Nap1l1P28656 391 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Tnpo1Q8BFY9 898 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 SrrtQ99MR6 875 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ccdc43Q9CR29 222 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Mad1l1Q9WTX8 717 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Pds5bQ4VA53 1446 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Cbx1P83917 185 aaKnown RBP10.87□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Chmp3Q9CQ10 224 aa10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Fam107bQ3TGF2 131 aa10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 CenpqQ9CPQ5 267 aa10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 KarsQ99MN1 595 aaKnown RBP10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Erc2Q6PH08 957 aa10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Smc2Q8CG48 1191 aaKnown RBP10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Plekhh1Q80TI1 1356 aa10.86□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Slc4a10Q5DTL9 1118 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Ccdc181Q80ZU5 509 aa10.85□□□□□ -0.67
Ptpre-204ENSMUST00000209979 Med4Q9CQA5 270 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms