RNA–Protein interactions for RNA: ENSMUST00000209578.1

Ebf3-205, Transcript of Transcription factor COE3, mousemouse

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Gene Ebf3, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-205ENSMUST00000209578 Card11Q8CIS0 1159 aa14.08□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Topaz1E5FYH1 1653 aa14.07□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Adamts13Q769J6 1426 aa14.07□□□□□ -0.16
Ebf3-205ENSMUST00000209578 CltcQ68FD5 1675 aaKnown RBP14.06□□□□□ -0.16
Ebf3-205ENSMUST00000209578 RictorQ6QI06 1708 aa14.06□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Mapk8ip2Q9ERE9 830 aa14.06□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Tulp4Q9JIL5 1547 aa14.06□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Adamts7Q68SA9 1657 aa14.06□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Med14A2ABV5 1459 aaKnown RBP14.05□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Akap12Q9WTQ5 1684 aa14.05□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Abca8aQ8K442 1620 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 AatkQ80YE4 1365 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Ino80Q6ZPV2 1559 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Adgrb3Q80ZF8 1522 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Hfm1D3Z4R1 1434 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Tecpr2Q3UH45 1423 aa14.04□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Scn4aQ9ER60 1841 aa14.03□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Arhgap23Q69ZH9 1483 aa14.03□□□□□ -0.16
Ebf3-205ENSMUST00000209578 RalgapbQ8BQZ4 1484 aa14.03□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Kdm2aP59997 1161 aa14.03□□□□□ -0.16
Ebf3-205ENSMUST00000209578 Efcab6Q6P1E8 1516 aa14.02□□□□□ -0.17
Ebf3-205ENSMUST00000209578 GphnQ8BUV3 769 aaKnown RBP14.01□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Os9Q8K2C7 672 aa14.01□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Ncoa1P70365 1447 aa14.01□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Skint5A7XUY5 1461 aa14□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Cwc22Q8C5N3 908 aaKnown RBP13.99□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Ehbp1l1Q99MS7 1716 aa13.99□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Zbtb4Q5F293 982 aa13.99□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Prdm2A2A7B5 1709 aaKnown RBP13.98□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Gm20521D3Z5F7 333 aa13.97□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Srpk2O54781 681 aaKnown RBP13.96□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Pip4k2bQ80XI4 416 aa13.96□□□□□ -0.17
Ebf3-205ENSMUST00000209578 Ltbp4Q8K4G1 1666 aa13.95□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Uggt1Q6P5E4 1551 aa13.95□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Rims1Q99NE5 1463 aa13.95□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Mroh1E0CZ22 1640 aa13.94□□□□□ -0.18
Ebf3-205ENSMUST00000209578 AU022751B1B0V2 589 aa13.93□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Fan1Q69ZT1 1020 aa13.93□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Rimbp3Q3V0F0 1606 aa13.93□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Myo3aQ8K3H5 1613 aa13.93□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Rock2P70336 1388 aa13.92□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Prrc2bQ7TPM1 1486 aaKnown RBP13.92□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Cep152A2AUM9 1736 aaKnown RBP13.92□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Slc24a1Q91WD8 1130 aa13.91□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Phlpp1Q8CHE4 1687 aa13.9□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Atp1b4Q99ME6 356 aa13.9□□□□□ -0.18
Ebf3-205ENSMUST00000209578 Srcin1Q9QWI6 1250 aa13.89□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Plxnc1Q9QZC2 1574 aa13.89□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Scaf11E9PZM7 1456 aaKnown RBP13.88□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Puf60Q3UEB3 564 aaKnown RBP13.88□□□□□ -0.19
Ebf3-205ENSMUST00000209578 P3h3Q8CG70 732 aa13.88□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Naip7Q9JIB3 1402 aa13.88□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Iqsec2Q5DU25 1478 aa13.87□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Usp40Q8BWR4 1235 aa13.87□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Kif13aQ9EQW7 1749 aa13.87□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Rims2Q9EQZ7 1530 aa13.87□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Plekhg5Q66T02 1073 aa13.86□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Itsn1Q9Z0R4 1714 aa13.86□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Gtf2e1Q9D0D5 440 aa13.85□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Shq1Q7TMX5 569 aa13.84□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Rapgef3Q8VCC8 918 aa13.84□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Slc52a2Q9D8F3 450 aa13.84□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Kdm5aQ3UXZ9 1690 aa13.84□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Myom1Q62234 1667 aaKnown RBP13.84□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Cdk5rap2Q8K389 1822 aa13.83□□□□□ -0.19
Ebf3-205ENSMUST00000209578 Gemin5Q8BX17 1502 aaKnown RBP13.83□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Stard8Q8K031 1019 aa13.83□□□□□ -0.2
Ebf3-205ENSMUST00000209578 PzpQ61838 1495 aa13.83□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Txndc2Q6P902 515 aa13.82□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Nphp4P59240 1425 aa13.82□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Lrrc7Q80TE7 1490 aa13.81□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Nop58Q6DFW4 536 aaKnown RBP13.81□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Q9D9H8 365 aa13.81□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Setd1aE9PYH6 1716 aa13.81□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Gli3Q61602 1583 aa13.81□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Stag3O70576 1240 aa13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Stk26Q99JT2 416 aa13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Chd2E9PZM4 1827 aaKnown RBP13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Psme1P97371 249 aa13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 IqubQ8CDK3 788 aa13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Pola1P33609 1465 aa13.8□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Smg6P61406 1418 aaKnown RBP13.79□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Gm13695A2AK44 830 aa13.79□□□□□ -0.2
Ebf3-205ENSMUST00000209578 PalldQ9ET54 1408 aa13.78□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Arid4bA2CG63 1314 aaKnown RBP13.77□□□□□ -0.2
Ebf3-205ENSMUST00000209578 DnmbpQ6TXD4 1580 aa13.77□□□□□ -0.2
Ebf3-205ENSMUST00000209578 Arhgef28P97433 1693 aa13.76□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Lmtk3Q5XJV6 1424 aa13.76□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Asxl2Q8BZ32 1370 aa13.76□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Nrxn3Q6P9K9 1571 aa13.76□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Sipa1l1Q8C0T5 1782 aa13.75□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Zc3h13E9Q784 1729 aaKnown RBP13.75□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Hspa1lP16627 641 aa13.74□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Itsn2Q9Z0R6 1659 aa13.74□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Utp14aQ640M1 767 aaKnown RBP13.74□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Ecm2Q5FW85 670 aa13.73□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Pank3Q8R2W9 370 aa13.73□□□□□ -0.21
Ebf3-205ENSMUST00000209578 PrxO55103 1391 aa13.73□□□□□ -0.21
Ebf3-205ENSMUST00000209578 PplQ9R269 1755 aa13.73□□□□□ -0.21
Ebf3-205ENSMUST00000209578 Slc4a1apE9PX68 744 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms