RNA–Protein interactions for RNA: ENSMUST00000209578.1

Ebf3-205, Transcript of Transcription factor COE3, mousemouse

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Gene Ebf3, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-205ENSMUST00000209578 Gm35339A0A140LHH9 1649 aa21.09■□□□□ 0.97
Ebf3-205ENSMUST00000209578 NischQ80TM9 1593 aa20.99■□□□□ 0.95
Ebf3-205ENSMUST00000209578 Abcc9P70170 1546 aa20.35■□□□□ 0.85
Ebf3-205ENSMUST00000209578 Abcc8B2RUS7 1588 aa20.1■□□□□ 0.81
Ebf3-205ENSMUST00000209578 ScribQ80U72 1612 aa19.43■□□□□ 0.7
Ebf3-205ENSMUST00000209578 NacadQ5SWP3 1504 aa18.88■□□□□ 0.61
Ebf3-205ENSMUST00000209578 Rhox8Q6VSS7 320 aa18.87■□□□□ 0.61
Ebf3-205ENSMUST00000209578 Kdm5dQ62240 1548 aa18.78■□□□□ 0.6
Ebf3-205ENSMUST00000209578 Dcaf1Q80TR8 1506 aa18.62■□□□□ 0.57
Ebf3-205ENSMUST00000209578 Sycp2Q9CUU3 1500 aa18.51■□□□□ 0.55
Ebf3-205ENSMUST00000209578 Rb1cc1Q9ESK9 1588 aa18.35■□□□□ 0.53
Ebf3-205ENSMUST00000209578 BicraF8VPZ9 1578 aa18.22■□□□□ 0.51
Ebf3-205ENSMUST00000209578 Baz1aO88379 1555 aa18.11■□□□□ 0.49
Ebf3-205ENSMUST00000209578 Ccdc180J3QNE4 1664 aa18.06■□□□□ 0.48
Ebf3-205ENSMUST00000209578 Rtl1Q7M732 1744 aa17.94■□□□□ 0.46
Ebf3-205ENSMUST00000209578 Dnajc5bQ9CQ94 199 aa17.92■□□□□ 0.46
Ebf3-205ENSMUST00000209578 Crybg2B7ZCC2 1516 aa17.89■□□□□ 0.45
Ebf3-205ENSMUST00000209578 Pds5bQ4VA53 1446 aaKnown RBP17.85■□□□□ 0.45
Ebf3-205ENSMUST00000209578 Zcchc6Q5BLK4 1491 aaKnown RBP17.83■□□□□ 0.45
Ebf3-205ENSMUST00000209578 Thoc2B1AZI6 1594 aaKnown RBP17.7■□□□□ 0.42
Ebf3-205ENSMUST00000209578 Smarca2Q6DIC0 1577 aa17.64■□□□□ 0.41
Ebf3-205ENSMUST00000209578 Atad2bE9Q166 1460 aaKnown RBP17.63■□□□□ 0.41
Ebf3-205ENSMUST00000209578 Ccdc136Q3TVA9 1136 aa17.56■□□□□ 0.4
Ebf3-205ENSMUST00000209578 Ercc6F8VPZ5 1481 aa17.44■□□□□ 0.38
Ebf3-205ENSMUST00000209578 Cecr2E9Q2Z1 1453 aa17.4■□□□□ 0.38
Ebf3-205ENSMUST00000209578 Smarca4Q3TKT4 1613 aaKnown RBP17.37■□□□□ 0.37
Ebf3-205ENSMUST00000209578 Cc2d2aQ8CFW7 1633 aa17.37■□□□□ 0.37
Ebf3-205ENSMUST00000209578 Fam135aQ6NS59 1506 aa17.29■□□□□ 0.36
Ebf3-205ENSMUST00000209578 Iqgap2Q3UQ44 1575 aa17.29■□□□□ 0.36
Ebf3-205ENSMUST00000209578 Trim41Q5NCC3 630 aa17.24■□□□□ 0.35
Ebf3-205ENSMUST00000209578 Baz1bQ9Z277 1479 aa17.23■□□□□ 0.35
Ebf3-205ENSMUST00000209578 Brd4Q9ESU6 1400 aaKnown RBP17.21■□□□□ 0.34
Ebf3-205ENSMUST00000209578 Wdr62Q3U3T8 1523 aa17.19■□□□□ 0.34
Ebf3-205ENSMUST00000209578 Frmpd1A2AKB4 1549 aa17.16■□□□□ 0.34
Ebf3-205ENSMUST00000209578 Phldb1Q6PDH0 1371 aaKnown RBP17.16■□□□□ 0.34
Ebf3-205ENSMUST00000209578 Synj1Q8CHC4 1574 aa17.13■□□□□ 0.33
Ebf3-205ENSMUST00000209578 CftrP26361 1476 aa17.08■□□□□ 0.33
Ebf3-205ENSMUST00000209578 Cttnbp2B9EJA2 1648 aa17.02■□□□□ 0.32
Ebf3-205ENSMUST00000209578 Ubl4bQ9CQ84 188 aa16.95■□□□□ 0.3
Ebf3-205ENSMUST00000209578 Esf1Q3V1V3 845 aaKnown RBP16.94■□□□□ 0.3
Ebf3-205ENSMUST00000209578 Mrc2Q64449 1479 aa16.89■□□□□ 0.29
Ebf3-205ENSMUST00000209578 Cngb1E1AZ71 1325 aa16.88■□□□□ 0.29
Ebf3-205ENSMUST00000209578 Golga3P55937 1487 aa16.82■□□□□ 0.28
Ebf3-205ENSMUST00000209578 Unc13aQ4KUS2 1712 aa16.8■□□□□ 0.28
Ebf3-205ENSMUST00000209578 HrcG5E8J6 738 aa16.79■□□□□ 0.28
Ebf3-205ENSMUST00000209578 Top2bQ64511 1612 aa16.68■□□□□ 0.26
Ebf3-205ENSMUST00000209578 Rsf1E9PWW9 1441 aaKnown RBP16.59■□□□□ 0.25
Ebf3-205ENSMUST00000209578 Chic1Q8CBW7 227 aa16.56■□□□□ 0.24
Ebf3-205ENSMUST00000209578 Ccdc88bQ4QRL3 1481 aa16.56■□□□□ 0.24
Ebf3-205ENSMUST00000209578 Cux2P70298 1426 aa16.52■□□□□ 0.24
Ebf3-205ENSMUST00000209578 Cep164Q5DU05 1446 aa16.51■□□□□ 0.23
Ebf3-205ENSMUST00000209578 Fmn1Q05860 1466 aa16.5■□□□□ 0.23
Ebf3-205ENSMUST00000209578 Kif15Q6P9L6 1387 aa16.5■□□□□ 0.23
Ebf3-205ENSMUST00000209578 Dnajc5P60904 198 aa16.49■□□□□ 0.23
Ebf3-205ENSMUST00000209578 Lrriq1Q0P5X1 1673 aa16.46■□□□□ 0.23
Ebf3-205ENSMUST00000209578 Lamc3Q9R0B6 1581 aa16.42■□□□□ 0.22
Ebf3-205ENSMUST00000209578 TnnQ80Z71 1560 aa16.4■□□□□ 0.22
Ebf3-205ENSMUST00000209578 Kif21aQ9QXL2 1672 aa16.37■□□□□ 0.21
Ebf3-205ENSMUST00000209578 Npm1Q61937 292 aaKnown RBP16.35■□□□□ 0.21
Ebf3-205ENSMUST00000209578 Gab3Q8BSM5 595 aa16.33■□□□□ 0.21
Ebf3-205ENSMUST00000209578 Top2aQ01320 1528 aaKnown RBP16.3■□□□□ 0.2
Ebf3-205ENSMUST00000209578 Il27Q8K3I6 234 aa16.28■□□□□ 0.2
Ebf3-205ENSMUST00000209578 Eif4g3Q80XI3 1579 aaKnown RBP16.27■□□□□ 0.2
Ebf3-205ENSMUST00000209578 Shroom2A2ALU4 1481 aa16.23■□□□□ 0.19
Ebf3-205ENSMUST00000209578 Ccdc18Q640L5 1455 aa16.22■□□□□ 0.19
Ebf3-205ENSMUST00000209578 Camsap1A2AHC3 1581 aa16.22■□□□□ 0.19
Ebf3-205ENSMUST00000209578 Dhx29Q6PGC1 1365 aaKnown RBP16.17■□□□□ 0.18
Ebf3-205ENSMUST00000209578 Urb2E9Q7L1 1524 aaKnown RBP16.16■□□□□ 0.18
Ebf3-205ENSMUST00000209578 LrpprcQ6PB66 1392 aaKnown RBP16.13■□□□□ 0.17
Ebf3-205ENSMUST00000209578 Plb1Q3TTY0 1478 aa16.13■□□□□ 0.17
Ebf3-205ENSMUST00000209578 Rapgef2Q8CHG7 1496 aa16.07■□□□□ 0.16
Ebf3-205ENSMUST00000209578 Npm2Q80W85 207 aa16.07■□□□□ 0.16
Ebf3-205ENSMUST00000209578 Crocc2F6XLV1 1638 aa16.06■□□□□ 0.16
Ebf3-205ENSMUST00000209578 Grin2bQ01097 1482 aa16.06■□□□□ 0.16
Ebf3-205ENSMUST00000209578 Ift140E9PY46 1464 aa16.04■□□□□ 0.16
Ebf3-205ENSMUST00000209578 PogzQ8BZH4 1409 aaKnown RBP16.02■□□□□ 0.16
Ebf3-205ENSMUST00000209578 PtprkP35822 1457 aa16.01■□□□□ 0.15
Ebf3-205ENSMUST00000209578 NrkQ9R0G8 1455 aa16.01■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Pabpn1Q8CCS6 302 aaKnown RBP16■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Col17a1Q07563 1470 aa15.99■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Shroom4Q1W617 1475 aa15.99■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Rusc2Q80U22 1514 aa15.98■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Cep162Q6ZQ06 1403 aa15.97■□□□□ 0.15
Ebf3-205ENSMUST00000209578 Duox2A2AQ99 1517 aa15.94■□□□□ 0.14
Ebf3-205ENSMUST00000209578 Myt1lP97500 1187 aa15.92■□□□□ 0.14
Ebf3-205ENSMUST00000209578 Efcab5A0JP43 1406 aa15.91■□□□□ 0.14
Ebf3-205ENSMUST00000209578 Zeb1Q64318 1117 aa15.89■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Arhgap35Q91YM2 1499 aa15.86■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Eif4g1Q6NZJ6 1600 aaKnown RBP15.86■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Ehmt2Q9Z148 1263 aaKnown RBP15.86■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Disp1Q3TDN0 1521 aa15.86■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Zcchc11B2RX14 1644 aaKnown RBP15.84■□□□□ 0.13
Ebf3-205ENSMUST00000209578 Cc2d2bA0A286YDU8 1405 aa15.83■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Pelp1Q9DBD5 1123 aaKnown RBP15.82■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Samd9lQ69Z37 1561 aa15.82■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Nup160Q9Z0W3 1402 aaKnown RBP15.81■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Mroh2bQ7M6Y6 1581 aa15.8■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Pbrm1Q8BSQ9 1634 aaKnown RBP15.8■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Map3k1P53349 1493 aa15.78■□□□□ 0.12
Ebf3-205ENSMUST00000209578 Rad54l2Q99NG0 1466 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms