RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Pde4cQ3UEI1 686 aa16.52■□□□□ 0.23
Rnf40-202ENSMUST00000205694 GorabQ8BRM2 368 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 MsnP26041 577 aaKnown RBP16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Usp47Q8BY87 1376 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Atp6v1dP57746 247 aa16.51■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Ncapd3Q6ZQK0 1506 aa16.5■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Pibf1E9Q6K3 756 aa16.5■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Ap3b2Q9JME5 1082 aa16.49■□□□□ 0.23
Rnf40-202ENSMUST00000205694 ErbinQ80TH2 1402 aa16.49■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Tsen2Q6P7W5 460 aa16.48■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Stk31Q99MW1 1018 aa16.48■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Cgnl1Q6AW69 1298 aa16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Erich3F6QRE9 1637 aa16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 CrebrfQ8CDG5 640 aaKnown RBP16.47■□□□□ 0.23
Rnf40-202ENSMUST00000205694 OvosQ3UU35 1456 aa16.46■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Abca5Q8K448 1642 aa16.46■□□□□ 0.23
Rnf40-202ENSMUST00000205694 Senp3Q9EP97 568 aaKnown RBP16.46■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Arhgef12Q8R4H2 1543 aaKnown RBP16.45■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Ncoa3O09000 1398 aa16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 RdxP26043 583 aaKnown RBP16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Wdr7Q920I9 1489 aa16.44■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Eif4g1Q6NZJ6 1600 aaKnown RBP16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Pank3Q8R2W9 370 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Tnnt2P50752 301 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 BC005561E9Q5E2 1589 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cd109Q8R422 1442 aa16.43■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cald1E9QA15 768 aaKnown RBP16.42■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Adamts12Q811B3 1600 aa16.42■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Abcc5Q9R1X5 1436 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Rrbp1Q99PL5 1605 aaKnown RBP16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Ccdc146E9Q9F7 977 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Cabp4Q8VHC5 271 aa16.41■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Gm1043A0A140LJC2 1431 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Pak3Q61036 559 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Naip2Q9QUK4 1447 aa16.4■□□□□ 0.22
Rnf40-202ENSMUST00000205694 Slc4a10Q5DTL9 1118 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccer1Q9CQL2 403 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rfx7F8VPJ6 1459 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Peg3Q3URU2 1571 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccdc60Q8C4J0 545 aa16.39■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Prex2Q3LAC4 1598 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Cspp1B2RX88 1205 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Zfp644E9QA22 1323 aa16.38■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ccdc47Q9D024 483 aaKnown RBP16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 GsdmaQ9EST1 446 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Smc4Q8CG47 1286 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rab11fip3Q8CHD8 1047 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rock1P70335 1354 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Fam184bQ0KK56 942 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Usp40Q8BWR4 1235 aa16.36■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Inpp5dQ9ES52 1191 aa16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rrp12Q6P5B0 1295 aaKnown RBP16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ylpm1Q9R0I7 1386 aaKnown RBP16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Mapkbp1Q6NS57 1503 aa16.35■□□□□ 0.21
Rnf40-202ENSMUST00000205694 G3bp1P97855 465 aaKnown RBP16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Shq1Q7TMX5 569 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ttll5Q8CHB8 1328 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Ralbp1Q62172 648 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Smg6P61406 1418 aaKnown RBP16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Adgrl3Q80TS3 1537 aa16.34■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Tpm3P21107 285 aaKnown RBP16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Rsph3aQ3UFY4 516 aa16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Afap1Q80YS6 731 aa16.33■□□□□ 0.21
Rnf40-202ENSMUST00000205694 Map3k4O08648 1597 aa16.33■□□□□ 0.2
Rnf40-202ENSMUST00000205694 St18Q80TY4 1045 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Abca16E9PWJ7 1678 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 SlkO54988 1233 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Tpd52l1O54818 204 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Kiaa0754Q69ZZ9 979 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Kif7B7ZNG0 1348 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Ddrgk1Q80WW9 315 aa16.32■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AI481877A2ALV5 1481 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Cfap74Q3UY96 1578 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 4933402E13RikQ9D4D2 429 aa16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Sf3a1Q8K4Z5 791 aaKnown RBP16.31■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Filip1lQ6P6L0 1131 aa16.3■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Cplx2P84086 134 aa16.3■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Mink1Q9JM52 1308 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AampJ3QN89 436 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 ChgaP26339 463 aaKnown RBP16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Gm21969J3QJZ1 289 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 AppP12023 770 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Glipr1l2Q9CQ35 332 aa16.28■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Trim30aP15533 496 aa16.27■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Nap1l3Q794H2 544 aa16.27■□□□□ 0.2
Rnf40-202ENSMUST00000205694 Becn1O88597 448 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Zscan10Q3URR7 782 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Chmp7Q8R1T1 451 aa16.26■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Mical1Q8VDP3 1048 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Sh3bgrQ9WUZ7 214 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Dapk1Q80YE7 1442 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Ciz1Q8VEH2 845 aa16.25■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Gm21190A0A0G2JGJ6 266 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Gpatch11Q3UFS4 262 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Vps53Q8CCB4 832 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Lmo7E9PYF4 1699 aaKnown RBP16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Evc2Q8K1G2 1220 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Isy1Q69ZQ2 285 aaKnown RBP16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Tceal9Q9DD24 104 aa16.24■□□□□ 0.19
Rnf40-202ENSMUST00000205694 Trim58Q5NCC9 485 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 54.1 ms