RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Ehbp1l1Q99MS7 1716 aa12.54□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Hnrnpul2Q00PI9 745 aaKnown RBP12.53□□□□□ -0.4
Scn8a-207ENSMUST00000200959 P3h3Q8CG70 732 aa12.53□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Adgrl2Q8JZZ7 1487 aa12.53□□□□□ -0.4
Scn8a-207ENSMUST00000200959 Cdk11bP24788 784 aaKnown RBP12.52□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Ankrd36D3Z4K0 1415 aa12.52□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Gm13695A2AK44 830 aa12.51□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Asxl2Q8BZ32 1370 aa12.51□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Fhad1A6PWD2 1420 aa12.51□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Ssh2Q5SW75 1423 aa12.51□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Vps8Q0P5W1 1427 aa12.5□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Tmem131lQ3U3D7 1597 aa12.5□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Marf1Q8BJ34 1730 aaKnown RBP12.5□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Tns3Q5SSZ5 1440 aa12.49□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Naip7Q9JIB3 1402 aa12.49□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Kif1bQ60575 1816 aaKnown RBP12.48□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Prdm2A2A7B5 1709 aaKnown RBP12.48□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Eno4Q8C042 619 aa12.48□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Ybx3Q9JKB3 361 aaKnown RBP12.48□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Abcc5Q9R1X5 1436 aa12.47□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Lamc1P02468 1607 aaKnown RBP12.47□□□□□ -0.41
Scn8a-207ENSMUST00000200959 C3P01027 1663 aa12.46□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Col22a1E9Q7P1 1613 aa12.46□□□□□ -0.41
Scn8a-207ENSMUST00000200959 Skint5A7XUY5 1461 aa12.46□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Mtus2Q3UHD3 1353 aa12.45□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Psme1P97371 249 aa12.45□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Smim5Q8BT42 78 aa12.45□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Ccdc6D3YZP9 469 aa12.44□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Ddx17Q501J6 650 aaKnown RBP12.44□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Rprd2Q6NXI6 1469 aaKnown RBP12.43□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Tecpr2Q3UH45 1423 aa12.43□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Ylpm1Q9R0I7 1386 aaKnown RBP12.43□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Pde4cQ3UEI1 686 aa12.42□□□□□ -0.42
Scn8a-207ENSMUST00000200959 PplQ9R269 1755 aa12.41□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Abcc10Q8R4P9 1501 aa12.41□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Cabp1Q9JLK7 227 aa12.4□□□□□ -0.42
Scn8a-207ENSMUST00000200959 Plekhh2Q8C115 1491 aa12.39□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Ino80Q6ZPV2 1559 aa12.39□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Lmtk3Q5XJV6 1424 aa12.38□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Atf3Q60765 181 aa12.38□□□□□ -0.43
Scn8a-207ENSMUST00000200959 VirmaA2AIV2 1811 aaKnown RBP12.38□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Zdbf2Q5SS00 2493 aaKnown RBP12.38□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Tmem94Q7TSH8 1360 aa12.38□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Efcab6Q6P1E8 1516 aa12.37□□□□□ -0.43
Scn8a-207ENSMUST00000200959 PalldQ9ET54 1408 aa12.37□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Ttc21bQ0HA38 1315 aa12.37□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Kif24Q6NWW5 1356 aa12.36□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Chic2Q9D9G3 165 aa12.36□□□□□ -0.43
Scn8a-207ENSMUST00000200959 KdrP35918 1367 aa12.34□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Col14a1Q80X19 1797 aa12.34□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Slit3Q9WVB4 1523 aa12.34□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Uggt1Q6P5E4 1551 aa12.34□□□□□ -0.43
Scn8a-207ENSMUST00000200959 NalcnQ8BXR5 1738 aa12.34□□□□□ -0.43
Scn8a-207ENSMUST00000200959 Sgsm1Q8BPQ7 1093 aa12.33□□□□□ -0.44
Scn8a-207ENSMUST00000200959 AnkarA2RT91 1465 aa12.33□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Atp7aQ64430 1491 aa12.33□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Unc13bQ9Z1N9 1602 aa12.33□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Abca8aQ8K442 1620 aa12.32□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Prrc2bQ7TPM1 1486 aaKnown RBP12.32□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Arhgef28P97433 1693 aa12.31□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Dapk1Q80YE7 1442 aa12.3□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Ubap1lG3UW59 384 aa12.3□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Sugp2Q8CH09 1067 aa12.3□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Emilin2Q8K482 1074 aa12.3□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Kcna3P16390 528 aa12.29□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Tex14Q7M6U3 1450 aa12.28□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Erich6D3Z6S9 713 aa12.28□□□□□ -0.44
Scn8a-207ENSMUST00000200959 GnpatP98192 678 aa12.28□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Pik3c2bE9QAN8 1632 aa12.27□□□□□ -0.44
Scn8a-207ENSMUST00000200959 Igf2rQ07113 2483 aaKnown RBP12.27□□□□□ -0.45
Scn8a-207ENSMUST00000200959 OscarQ8VBT3 265 aa12.27□□□□□ -0.45
Scn8a-207ENSMUST00000200959 N4bp2F8VQG7 1678 aaKnown RBP12.26□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Stk24Q99KH8 431 aa12.26□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Ddx54Q8K4L0 874 aaKnown RBP12.25□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Acsbg1Q99PU5 721 aa12.25□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Psrc1Q9D0P7 329 aa12.25□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Tnks1bp1P58871 1720 aa12.25□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Adamtsl1Q8BLI0 1745 aa12.25□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Tarbp1E9Q368 1579 aa12.24□□□□□ -0.45
Scn8a-207ENSMUST00000200959 HnrnpmQ9D0E1 729 aaKnown RBP12.24□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Tnrc6cQ3UHC0 1690 aaKnown RBP12.23□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Iqgap3F8VQ29 1632 aa12.23□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Yy1Q00899 414 aa12.23□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Ift172Q6VH22 1749 aa12.23□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Il16O54824 1322 aa12.22□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Sipa1l2Q80TE4 1722 aa12.22□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Sall3Q62255 1320 aa12.21□□□□□ -0.45
Scn8a-207ENSMUST00000200959 PsdQ5DTT2 1024 aa12.21□□□□□ -0.45
Scn8a-207ENSMUST00000200959 Mroh1E0CZ22 1640 aa12.21□□□□□ -0.46
Scn8a-207ENSMUST00000200959 PtprgQ05909 1442 aa12.2□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Rreb1Q3UH06 1700 aaKnown RBP12.2□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Ltbp1Q8CG19 1712 aa12.2□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Atp1b4Q99ME6 356 aa12.2□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Itsn2Q9Z0R6 1659 aa12.19□□□□□ -0.46
Scn8a-207ENSMUST00000200959 HrcG5E8J6 738 aa12.19□□□□□ -0.46
Scn8a-207ENSMUST00000200959 InhbeO08717 350 aa12.19□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Kiaa0319Q5SZV5 1081 aa12.19□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Q9D9H8 365 aa12.19□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Zfp644E9QA22 1323 aa12.18□□□□□ -0.46
Scn8a-207ENSMUST00000200959 Arhgef1Q61210 920 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms