RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Ttll13A4Q9F6 804 aa14.91□□□□□ -0.02
Lig1-211ENSMUST00000177588 Rad21Q61550 635 aaKnown RBP14.91□□□□□ -0.02
Lig1-211ENSMUST00000177588 Depdc5P61460 1591 aa14.91□□□□□ -0.02
Lig1-211ENSMUST00000177588 Nos1Q9Z0J4 1429 aa14.9□□□□□ -0.02
Lig1-211ENSMUST00000177588 Plch2A2AP18 1501 aa14.9□□□□□ -0.02
Lig1-211ENSMUST00000177588 Col17a1Q07563 1470 aa14.9□□□□□ -0.02
Lig1-211ENSMUST00000177588 PrxO55103 1391 aa14.89□□□□□ -0.03
Lig1-211ENSMUST00000177588 Ptch1Q61115 1434 aa14.88□□□□□ -0.03
Lig1-211ENSMUST00000177588 Ttc41Q692V3 1318 aa14.88□□□□□ -0.03
Lig1-211ENSMUST00000177588 Pank3Q8R2W9 370 aa14.88□□□□□ -0.03
Lig1-211ENSMUST00000177588 Nsd2Q8BVE8 1365 aa14.88□□□□□ -0.03
Lig1-211ENSMUST00000177588 Xrn1P97789 1719 aaKnown RBP14.87□□□□□ -0.03
Lig1-211ENSMUST00000177588 Tex14Q7M6U3 1450 aa14.87□□□□□ -0.03
Lig1-211ENSMUST00000177588 Zbtb4Q5F293 982 aa14.87□□□□□ -0.03
Lig1-211ENSMUST00000177588 Kif1bQ60575 1816 aaKnown RBP14.87□□□□□ -0.03
Lig1-211ENSMUST00000177588 Mbd3Q9Z2D8 285 aaKnown RBP14.87□□□□□ -0.03
Lig1-211ENSMUST00000177588 Arid4bA2CG63 1314 aaKnown RBP14.86□□□□□ -0.03
Lig1-211ENSMUST00000177588 ShprhQ7TPQ3 1674 aa14.86□□□□□ -0.03
Lig1-211ENSMUST00000177588 Gtf3c3Q3TMP1 882 aa14.86□□□□□ -0.03
Lig1-211ENSMUST00000177588 Mroh3A0A1D5RM54 893 aa14.85□□□□□ -0.03
Lig1-211ENSMUST00000177588 Nkx1-2P42580 305 aa14.85□□□□□ -0.03
Lig1-211ENSMUST00000177588 Znf518aB2RRF6 1478 aaKnown RBP14.85□□□□□ -0.03
Lig1-211ENSMUST00000177588 Inpp5dQ9ES52 1191 aa14.85□□□□□ -0.03
Lig1-211ENSMUST00000177588 Irx3P81067 507 aa14.84□□□□□ -0.03
Lig1-211ENSMUST00000177588 Kdm2bQ6P1G2 1309 aa14.83□□□□□ -0.04
Lig1-211ENSMUST00000177588 Clasp1Q80TV8 1535 aaKnown RBP14.83□□□□□ -0.04
Lig1-211ENSMUST00000177588 Esx1O88933 382 aa14.83□□□□□ -0.04
Lig1-211ENSMUST00000177588 Zscan10Q3URR7 782 aa14.83□□□□□ -0.04
Lig1-211ENSMUST00000177588 Kif16bB1AVY7 1312 aa14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 Ifit1bl1D3Z6F0 470 aa14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 Myo5cE9Q1F5 1742 aa14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 Amer1Q7TS75 1132 aa14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 Ylpm1Q9R0I7 1386 aaKnown RBP14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 Ttc21bQ0HA38 1315 aa14.82□□□□□ -0.04
Lig1-211ENSMUST00000177588 AglF8VPN4 1532 aa14.81□□□□□ -0.04
Lig1-211ENSMUST00000177588 Adamts13Q769J6 1426 aa14.81□□□□□ -0.04
Lig1-211ENSMUST00000177588 B4galnt3Q6L8S8 986 aa14.81□□□□□ -0.04
Lig1-211ENSMUST00000177588 Stk24Q99KH8 431 aa14.81□□□□□ -0.04
Lig1-211ENSMUST00000177588 Atp10aO54827 1508 aa14.81□□□□□ -0.04
Lig1-211ENSMUST00000177588 Edc4Q3UJB9 1406 aaKnown RBP14.8□□□□□ -0.04
Lig1-211ENSMUST00000177588 Prdm2A2A7B5 1709 aaKnown RBP14.8□□□□□ -0.04
Lig1-211ENSMUST00000177588 Sall3Q62255 1320 aa14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 Tmem131lQ3U3D7 1597 aa14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 CanxP35564 591 aaKnown RBP14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 Gli2Q0VGT2 1544 aa14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 Tmf1B9EKI3 1091 aa14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 CrbnQ8C7D2 445 aa14.79□□□□□ -0.04
Lig1-211ENSMUST00000177588 Sbno1Q689Z5 1390 aa14.78□□□□□ -0.04
Lig1-211ENSMUST00000177588 DaxxO35613 739 aa14.78□□□□□ -0.04
Lig1-211ENSMUST00000177588 EspnQ9ET47 871 aa14.78□□□□□ -0.04
Lig1-211ENSMUST00000177588 Rwdd1Q9CQK7 243 aa14.77□□□□□ -0.05
Lig1-211ENSMUST00000177588 Ppp2r1aQ76MZ3 589 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Zmym3Q9JLM4 1370 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Yeats2Q3TUF7 1407 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Uggt2E9Q4X2 1504 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Dip2cE9PWR4 1557 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Sart3Q9JLI8 962 aaKnown RBP14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Plekhh1Q80TI1 1356 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Trpm1Q2TV84 1622 aa14.76□□□□□ -0.05
Lig1-211ENSMUST00000177588 Kdm2aP59997 1161 aa14.75□□□□□ -0.05
Lig1-211ENSMUST00000177588 Gm16486A0A1D5RMD1 1434 aa14.75□□□□□ -0.05
Lig1-211ENSMUST00000177588 Ttc37F8VPK0 1563 aa14.75□□□□□ -0.05
Lig1-211ENSMUST00000177588 NudcO35685 332 aaKnown RBP14.75□□□□□ -0.05
Lig1-211ENSMUST00000177588 Fndc1E9Q043 1732 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 4933416C03RikQ3V063 378 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 Os9Q8K2C7 672 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 Dbr1Q923B1 550 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 Chmp5Q9D7S9 219 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 Abca6Q8K441 1624 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 AnkarA2RT91 1465 aa14.74□□□□□ -0.05
Lig1-211ENSMUST00000177588 Rab3gap2Q8BMG7 1366 aa14.73□□□□□ -0.05
Lig1-211ENSMUST00000177588 Atf7ipQ7TT18 1306 aa14.73□□□□□ -0.05
Lig1-211ENSMUST00000177588 ErbinQ80TH2 1402 aa14.73□□□□□ -0.05
Lig1-211ENSMUST00000177588 Dnai1Q8C0M8 701 aa14.73□□□□□ -0.05
Lig1-211ENSMUST00000177588 RereQ80TZ9 1558 aa14.73□□□□□ -0.05
Lig1-211ENSMUST00000177588 Pola1P33609 1465 aa14.72□□□□□ -0.05
Lig1-211ENSMUST00000177588 Slc4a1apE9PX68 744 aa14.72□□□□□ -0.05
Lig1-211ENSMUST00000177588 Mre11Q61216 706 aa14.72□□□□□ -0.05
Lig1-211ENSMUST00000177588 Tulp4Q9JIL5 1547 aa14.72□□□□□ -0.05
Lig1-211ENSMUST00000177588 Smc5Q8CG46 1101 aaKnown RBP14.71□□□□□ -0.05
Lig1-211ENSMUST00000177588 Synj2Q9D2G5 1434 aa14.71□□□□□ -0.05
Lig1-211ENSMUST00000177588 Topbp1Q6ZQF0 1515 aa14.71□□□□□ -0.05
Lig1-211ENSMUST00000177588 Cdc42bpgQ80UW5 1551 aa14.71□□□□□ -0.06
Lig1-211ENSMUST00000177588 Cep152A2AUM9 1736 aaKnown RBP14.7□□□□□ -0.06
Lig1-211ENSMUST00000177588 Itsn2Q9Z0R6 1659 aa14.7□□□□□ -0.06
Lig1-211ENSMUST00000177588 Fam184bQ0KK56 942 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Cfap65Q3V0B4 1847 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Ppm1gQ61074 542 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Plppr3Q7TPB0 716 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Plcd4Q8K3R3 807 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Srcin1Q9QWI6 1250 aa14.69□□□□□ -0.06
Lig1-211ENSMUST00000177588 Prex1Q69ZK0 1650 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Kiaa0556Q8C753 1610 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Abcc6Q9R1S7 1498 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Abca8aQ8K442 1620 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Sipa1l1Q8C0T5 1782 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Akap12Q9WTQ5 1684 aa14.68□□□□□ -0.06
Lig1-211ENSMUST00000177588 Apbb1Q9QXJ1 710 aa14.67□□□□□ -0.06
Lig1-211ENSMUST00000177588 Mapk8ip3Q9ESN9 1337 aa14.67□□□□□ -0.06
Lig1-211ENSMUST00000177588 Gm20521D3Z5F7 333 aa14.66□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms