RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Cspp1B2RX88 1205 aa11.07□□□□□ -0.64
Lig3-211ENSMUST00000173722 Commd10Q8JZY2 202 aa11.07□□□□□ -0.64
Lig3-211ENSMUST00000173722 Rusc2Q80U22 1514 aa11.07□□□□□ -0.64
Lig3-211ENSMUST00000173722 Ifit1bl1D3Z6F0 470 aa11.07□□□□□ -0.64
Lig3-211ENSMUST00000173722 Atp10dQ8K2X1 1416 aa11.07□□□□□ -0.64
Lig3-211ENSMUST00000173722 Cwc22Q8C5N3 908 aaKnown RBP11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 UvssaQ9D479 717 aa11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Prdm16A2A935 1275 aa11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Ccdc34Q3UI66 367 aa11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Sf3b2Q3UJB0 878 aaKnown RBP11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Sycp1Q62209 993 aa11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Necab1Q8BG18 352 aa11.06□□□□□ -0.64
Lig3-211ENSMUST00000173722 Supt16hQ920B9 1047 aa11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 Znf704Q9ERQ3 566 aa11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 Pla2r1Q62028 1487 aa11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 CalrP14211 416 aaKnown RBP11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 Rufy1Q8BIJ7 712 aa11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 Cux1P53564 1515 aa11.05□□□□□ -0.64
Lig3-211ENSMUST00000173722 Magi1Q6RHR9 1471 aa11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 AppP12023 770 aa11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 HmmrQ00547 794 aaKnown RBP11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 Nup160Q9Z0W3 1402 aaKnown RBP11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 Dusp9Q7TNL7 452 aa11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 Rwdd1Q9CQK7 243 aa11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 PxdnQ3UQ28 1475 aa11.04□□□□□ -0.64
Lig3-211ENSMUST00000173722 Eva1cP58659 440 aa11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Srek1Q8BZX4 494 aaKnown RBP11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Klf15Q9EPW2 415 aa11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Eif4g3Q80XI3 1579 aaKnown RBP11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Hspa5P20029 655 aaKnown RBP11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Dnajc5P60904 198 aa11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Sept11Q8C1B7 431 aaKnown RBP11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Adgrl3Q80TS3 1537 aa11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 UacaQ8CGB3 1411 aa11.03□□□□□ -0.64
Lig3-211ENSMUST00000173722 Atp6v1dP57746 247 aa11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 Lrrcc1Q69ZB0 1026 aa11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 Naip1Q9QWK5 1403 aa11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 SafbD3YXK2 937 aaKnown RBP11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 Skida1Q80YR3 822 aa11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 WizO88286 1684 aaKnown RBP11.02□□□□□ -0.65
Lig3-211ENSMUST00000173722 Irx3P81067 507 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Skap1Q3UUV5 355 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Slc4a10Q5DTL9 1118 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Cep89Q9CZX2 791 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Chaf1aQ9QWF0 911 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Mbd3Q9Z2D8 285 aaKnown RBP11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Nap1l1P28656 391 aaKnown RBP11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Pde4cQ3UEI1 686 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Cetn4Q8K4K1 168 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Ap3b2Q9JME5 1082 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Dctn1O08788 1281 aa11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 Utp3Q9JI13 469 aaKnown RBP11.01□□□□□ -0.65
Lig3-211ENSMUST00000173722 MycnP03966 462 aaKnown RBP11□□□□□ -0.65
Lig3-211ENSMUST00000173722 Sf3a1Q8K4Z5 791 aaKnown RBP11□□□□□ -0.65
Lig3-211ENSMUST00000173722 U2af1Q9D883 239 aaKnown RBP11□□□□□ -0.65
Lig3-211ENSMUST00000173722 Pibf1E9Q6K3 756 aa11□□□□□ -0.65
Lig3-211ENSMUST00000173722 Egfem1Q8C088 590 aa11□□□□□ -0.65
Lig3-211ENSMUST00000173722 Mug1P28665 1476 aa10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 Arap1Q4LDD4 1452 aa10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 Utp14aQ640M1 767 aaKnown RBP10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 Hook1Q8BIL5 728 aa10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 Wdr78E9PYY5 807 aa10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 CrcpO35427 148 aa10.99□□□□□ -0.65
Lig3-211ENSMUST00000173722 Shq1Q7TMX5 569 aa10.98□□□□□ -0.65
Lig3-211ENSMUST00000173722 Cplx1P63040 134 aa10.98□□□□□ -0.65
Lig3-211ENSMUST00000173722 Gtf2e1Q9D0D5 440 aa10.98□□□□□ -0.65
Lig3-211ENSMUST00000173722 Arhgef5E9Q7D5 1581 aa10.98□□□□□ -0.65
Lig3-211ENSMUST00000173722 Unc13aQ4KUS2 1712 aa10.98□□□□□ -0.65
Lig3-211ENSMUST00000173722 Rec8Q8C5S7 591 aa10.97□□□□□ -0.65
Lig3-211ENSMUST00000173722 Znf330Q922H9 316 aa10.97□□□□□ -0.65
Lig3-211ENSMUST00000173722 Mns1Q61884 491 aa10.97□□□□□ -0.65
Lig3-211ENSMUST00000173722 Spata24Q6P926 205 aa10.97□□□□□ -0.65
Lig3-211ENSMUST00000173722 GorabQ8BRM2 368 aa10.97□□□□□ -0.65
Lig3-211ENSMUST00000173722 Fan1Q69ZT1 1020 aa10.96□□□□□ -0.65
Lig3-211ENSMUST00000173722 Arhgef18Q6P9R4 1021 aa10.96□□□□□ -0.65
Lig3-211ENSMUST00000173722 Nap1l3Q794H2 544 aa10.96□□□□□ -0.65
Lig3-211ENSMUST00000173722 Speer4f1Q9D5Q6 258 aa10.96□□□□□ -0.65
Lig3-211ENSMUST00000173722 Magi3Q9EQJ9 1476 aa10.96□□□□□ -0.65
Lig3-211ENSMUST00000173722 Rsph6aQ8CDR2 708 aa10.96□□□□□ -0.66
Lig3-211ENSMUST00000173722 Cluap1Q8R3P7 413 aa10.96□□□□□ -0.66
Lig3-211ENSMUST00000173722 Sh3bgrQ9WUZ7 214 aa10.96□□□□□ -0.66
Lig3-211ENSMUST00000173722 Kif3cO35066 796 aa10.96□□□□□ -0.66
Lig3-211ENSMUST00000173722 Senp3Q9EP97 568 aaKnown RBP10.96□□□□□ -0.66
Lig3-211ENSMUST00000173722 Shroom2A2ALU4 1481 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 OvosQ3UU35 1456 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Gpatch8A2A6A1 1505 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 A0A0U1RNP2 1173 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Taok2Q6ZQ29 1240 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Trim29Q8R2Q0 587 aa10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Mfap1aC0HKD8 439 aaKnown RBP10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Mfap1bC0HKD9 439 aaKnown RBP10.95□□□□□ -0.66
Lig3-211ENSMUST00000173722 Znhit6Q3UFB2 460 aaKnown RBP10.94□□□□□ -0.66
Lig3-211ENSMUST00000173722 Fancd2Q80V62 1450 aa10.94□□□□□ -0.66
Lig3-211ENSMUST00000173722 AdnpQ9Z103 1108 aaKnown RBP10.94□□□□□ -0.66
Lig3-211ENSMUST00000173722 Gcom1E9PZ54 550 aa10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 ArsiQ32KI9 573 aa10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 MyzapQ3UIJ9 466 aa10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 Rbm5Q91YE7 815 aaKnown RBP10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 ErbinQ80TH2 1402 aa10.93□□□□□ -0.66
Lig3-211ENSMUST00000173722 Rrp12Q6P5B0 1295 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms