RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Rab3gap2Q8BMG7 1366 aa22.7■■□□□ 1.22
Ckap4-202ENSMUST00000167671 NudcO35685 332 aaKnown RBP22.69■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Plekhh1Q80TI1 1356 aa22.69■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Rrbp1Q99PL5 1605 aaKnown RBP22.69■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Gm32742A0A1B0GT42 1604 aa22.68■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Dnai1Q8C0M8 701 aa22.68■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Map3k5O35099 1380 aa22.68■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Sall3Q62255 1320 aa22.67■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Gm16486A0A1D5RMD1 1434 aa22.66■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Ppip5k1A2ARP1 1436 aa22.66■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Ttc41Q692V3 1318 aa22.65■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Edc4Q3UJB9 1406 aaKnown RBP22.65■■□□□ 1.22
Ckap4-202ENSMUST00000167671 Ccdc30Q8BVF4 654 aa22.64■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Dcaf11Q91VU6 549 aa22.64■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Kif7B7ZNG0 1348 aa22.64■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Trim30dE9PWL0 497 aa22.62■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Tulp4Q9JIL5 1547 aa22.62■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Sbno1Q689Z5 1390 aa22.62■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Mast1Q9R1L5 1570 aa22.62■■□□□ 1.21
Ckap4-202ENSMUST00000167671 4930567H17RikQ3V0K5 233 aa22.61■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Tspyl2Q7TQI8 677 aa22.61■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Smc5Q8CG46 1101 aaKnown RBP22.6■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Gm20521D3Z5F7 333 aa22.6■■□□□ 1.21
Ckap4-202ENSMUST00000167671 AI481877A2ALV5 1481 aa22.59■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Plcd4Q8K3R3 807 aa22.59■■□□□ 1.21
Ckap4-202ENSMUST00000167671 ArxO35085 564 aa22.59■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Cep170Q6A065 1588 aa22.58■■□□□ 1.21
Ckap4-202ENSMUST00000167671 Eif2s2Q99L45 331 aaKnown RBP22.58■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Clasp1Q80TV8 1535 aaKnown RBP22.57■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Rusc2Q80U22 1514 aa22.57■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Ppm1gQ61074 542 aa22.57■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Rnf17Q99MV7 1640 aa22.56■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Gas2l2Q5SSG4 860 aa22.56■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Atf7ipQ7TT18 1306 aa22.56■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Mre11Q61216 706 aa22.55■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Usp19Q3UJD6 1360 aa22.55■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Cdc42bpbQ7TT50 1713 aa22.54■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Golga2Q921M4 999 aa22.54■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Ak7Q9D2H2 614 aa22.54■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Amer1Q7TS75 1132 aa22.54■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Prdm16A2A935 1275 aa22.53■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Cnga1P29974 684 aa22.53■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Hsp90ab1P11499 724 aaKnown RBP22.53■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Pank1Q8K4K6 548 aa22.53■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Stk24Q99KH8 431 aa22.53■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Gtf2e1Q9D0D5 440 aa22.52■■□□□ 1.2
Ckap4-202ENSMUST00000167671 Mapk8ip3Q9ESN9 1337 aa22.51■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Abcc6Q9R1S7 1498 aa22.51■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Cfap74Q3UY96 1578 aa22.51■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Nsd2Q8BVE8 1365 aa22.51■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Armcx1Q9CX83 456 aa22.5■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Fan1Q69ZT1 1020 aa22.5■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Ipo8Q7TMY7 1010 aa22.49■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Polr3glQ8R0C0 218 aa22.49■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Robo2Q7TPD3 1470 aa22.49■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Usp40Q8BWR4 1235 aa22.48■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Col17a1Q07563 1470 aa22.48■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Usp54Q8BL06 1588 aaKnown RBP22.48■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Pdcd11Q6NS46 1862 aaKnown RBP22.48■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Kif1bQ60575 1816 aaKnown RBP22.47■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Srpk2O54781 681 aaKnown RBP22.46■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Gm14025A2AP89 1413 aa22.46■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Neurl4Q5NCX5 1563 aa22.46■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Fgd6Q69ZL1 1399 aa22.46■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Pola1P33609 1465 aa22.46■■□□□ 1.19
Ckap4-202ENSMUST00000167671 Kif3bQ61771 747 aa22.44■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Hecw1Q8K4P8 1604 aa22.44■■□□□ 1.18
Ckap4-202ENSMUST00000167671 ShprhQ7TPQ3 1674 aa22.44■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Ccdc183A2AJB1 534 aa22.43■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Trim26Q99PN3 545 aa22.43■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Atxn3Q9CVD2 355 aa22.42■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Abcc3B2RX12 1523 aa22.42■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Kiaa1107Q80TK0 1369 aa22.42■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Uspl1Q3ULM6 1089 aa22.41■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Kdm5aQ3UXZ9 1690 aa22.41■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Ralbp1Q62172 648 aa22.4■■□□□ 1.18
Ckap4-202ENSMUST00000167671 Zmym3Q9JLM4 1370 aa22.39■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Gm6268A2A3U9 297 aa22.39■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Itsn2Q9Z0R6 1659 aa22.38■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Rlbp1Q9Z275 317 aa22.38■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Atp10dQ8K2X1 1416 aa22.37■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Duxf3A0A0N4SV92 674 aa22.36■■□□□ 1.17
Ckap4-202ENSMUST00000167671 AnkarA2RT91 1465 aa22.35■■□□□ 1.17
Ckap4-202ENSMUST00000167671 ErbinQ80TH2 1402 aa22.35■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Ppp1r9bQ6R891 817 aaKnown RBP22.34■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Ylpm1Q9R0I7 1386 aaKnown RBP22.33■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Trim58Q5NCC9 485 aa22.33■■□□□ 1.17
Ckap4-202ENSMUST00000167671 KarsQ99MN1 595 aaKnown RBP22.33■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Uggt2E9Q4X2 1504 aa22.33■■□□□ 1.17
Ckap4-202ENSMUST00000167671 Abcc1O35379 1528 aa22.33■■□□□ 1.17
Ckap4-202ENSMUST00000167671 NhsB1AV60 1647 aa22.33■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Ttc21bQ0HA38 1315 aa22.32■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Znf608Q56A10 1511 aa22.3■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Myo3aQ8K3H5 1613 aa22.3■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Xrn1P97789 1719 aaKnown RBP22.29■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Kidins220E9Q9B7 1793 aa22.29■■□□□ 1.16
Ckap4-202ENSMUST00000167671 GsdmaQ9EST1 446 aa22.28■■□□□ 1.16
Ckap4-202ENSMUST00000167671 P2rx7Q9Z1M0 595 aa22.28■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Abca17E9PX95 1733 aa22.28■■□□□ 1.16
Ckap4-202ENSMUST00000167671 Apaf1O88879 1249 aa22.27■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 54.6 ms