RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ccdc173A0JLY1 547 aa11.26□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Exoc6Q8R313 802 aa11.26□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Trim30cD3YVI9 513 aa11.25□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Psme1P97371 249 aa11.25□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Mad1l1Q9WTX8 717 aaKnown RBP11.25□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Dcaf11Q91VU6 549 aa11.25□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Cep89Q9CZX2 791 aa11.25□□□□□ -0.61
Col6a5-201ENSMUST00000165165 PhaxQ9JJT9 385 aaKnown RBP11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Ifit1bl1D3Z6F0 470 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Ccdc96Q9CR92 584 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Smc3Q9CW03 1217 aaKnown RBP11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Rnf20Q5DTM8 973 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Arhgef18Q6P9R4 1021 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Ubxn4Q8VCH8 506 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 TimelessQ9R1X4 1197 aa11.24□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Kiaa0753Q6A000 959 aa11.23□□□□□ -0.61
Col6a5-201ENSMUST00000165165 OptnQ8K3K8 584 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Fam43aQ8BUP8 424 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 TxlnbQ8VBT1 685 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Rbm10Q99KG3 930 aaKnown RBP11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Ppm1eQ80TL0 749 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Themis2Q91YX0 663 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Gtf2f1Q3THK3 508 aaKnown RBP11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Plcd4Q8K3R3 807 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Chmp4cQ9D7F7 232 aa11.22□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Phactr2B1AVP0 632 aa11.21□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Rabep1O35551 862 aa11.21□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Smc4Q8CG47 1286 aa11.21□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Arglu1Q3UL36 271 aaKnown RBP11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 L1td1Q587J6 782 aaKnown RBP11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Trim29Q8R2Q0 587 aa11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Rbm25B2RY56 838 aaKnown RBP11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 NefhP19246 1090 aa11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 SelenooQ9DBC0 667 aa11.21□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Ciz1Q8VEH2 845 aa11.2□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Tmco3Q8BH01 678 aa11.2□□□□□ -0.62
Col6a5-201ENSMUST00000165165 UvssaQ9D479 717 aa11.2□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Rock2P70336 1388 aa11.2□□□□□ -0.62
Col6a5-201ENSMUST00000165165 CrcpO35427 148 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Homer1Q9Z2Y3 366 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Secisbp2lQ6A098 1086 aaKnown RBP11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Ccdc18Q640L5 1455 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Tmx4Q8C0L0 335 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Erich4Q3UNU4 136 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Ccdc181Q80ZU5 509 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Usp48Q3V0C5 1052 aa11.19□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Pak3Q61036 559 aa11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 CntlnA2AM05 1397 aa11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Rsf1E9PWW9 1441 aaKnown RBP11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 CenphQ9QYM8 241 aa11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Ercc6F8VPZ5 1481 aa11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Sept11Q8C1B7 431 aaKnown RBP11.18□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Lrrcc1Q69ZB0 1026 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Rrp9Q91WM3 475 aaKnown RBP11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Me1P06801 572 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Lrrc45Q8CIM1 670 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 PogkQ80TC5 607 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Slc13a4Q8BZ82 625 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Cc2d1aQ8K1A6 943 aa11.17□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Hspa5P20029 655 aaKnown RBP11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Luc7lQ9CYI4 371 aaKnown RBP11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Q8C5K5 320 aa11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Neurod6P48986 337 aa11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 ItpripQ3TNL8 555 aa11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Ddx23D3Z0M9 819 aaKnown RBP11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Chrna2Q91X60 512 aa11.16□□□□□ -0.62
Col6a5-201ENSMUST00000165165 PrkcshO08795 521 aa11.15□□□□□ -0.62
Col6a5-201ENSMUST00000165165 4921530L21RikQ9CQ47 274 aa11.15□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Nolc1E9Q5C9 702 aaKnown RBP11.15□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Map2k1P31938 393 aa11.15□□□□□ -0.62
Col6a5-201ENSMUST00000165165 StambpQ9CQ26 424 aa11.15□□□□□ -0.62
Col6a5-201ENSMUST00000165165 Map9Q3TRR0 646 aa11.15□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ccdc83Q9D4V3 305 aa11.14□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Sept6Q9R1T4 434 aa11.14□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Rnf214Q8BFU3 668 aaKnown RBP11.14□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Bag1Q60739 355 aa11.14□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Cnksr2Q80YA9 1032 aa11.14□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nf2P46662 596 aa11.13□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ppp1r18Q8BQ30 594 aa11.13□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Fmnl2A2APV2 1086 aa11.13□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ssr1Q9CY50 286 aaKnown RBP11.13□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Cfap99A0A140LIX9 648 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Erc1Q99MI1 1120 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ccdc102aQ3TMW1 549 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Tax1bp1Q3UKC1 814 aaKnown RBP11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Txndc2Q6P902 515 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nop14Q8R3N1 860 aaKnown RBP11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Stk31Q99MW1 1018 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Mipol1Q9D9F8 279 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nol12Q8BG17 217 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ccdc60Q8C4J0 545 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 PdcQ9QW08 244 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Abcd1P48410 736 aa11.12□□□□□ -0.63
Col6a5-201ENSMUST00000165165 IncenpQ9WU62 880 aa11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Hmox1P14901 289 aa11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Nol7Q9D7Z3 254 aaKnown RBP11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ap3b2Q9JME5 1082 aa11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Ccdc112A0AUP1 442 aa11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Phldb2Q8K1N2 1249 aa11.11□□□□□ -0.63
Col6a5-201ENSMUST00000165165 Cchcr1Q8K2I2 770 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms