RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm13695A2AK44 830 aa35,52■■■■□ 3,28
Tpm1-216ENSMUST00000113707 Rsph4aQ8BYM7 716 aa35,5■■■■□ 3,27
Tpm1-216ENSMUST00000113707 Stra8P70278 393 aa35,5■■■■□ 3,27
Tpm1-216ENSMUST00000113707 Knl1Q66JQ7 1612 aa35,49■■■■□ 3,27
Tpm1-216ENSMUST00000113707 Myom2Q14BI5 1463 aa35,49■■■■□ 3,27
Tpm1-216ENSMUST00000113707 Kdm2aP59997 1161 aa35,48■■■■□ 3,27
Tpm1-216ENSMUST00000113707 NpatQ8BMA5 1420 aa35,45■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Uggt1Q6P5E4 1551 aa35,44■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Gm20521D3Z5F7 333 aa35,42■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Os9Q8K2C7 672 aa35,4■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Myo3aQ8K3H5 1613 aa35,4■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Srcin1Q9QWI6 1250 aa35,39■■■■□ 3,26
Tpm1-216ENSMUST00000113707 Srpk2O54781 681 aaKnown RBP35,38■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Mroh1E0CZ22 1640 aa35,36■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Pola1P33609 1465 aa35,36■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Stard8Q8K031 1019 aa35,36■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Zbtb4Q5F293 982 aa35,35■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Hfm1D3Z4R1 1434 aa35,35■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Qser1A2BIE1 1698 aa35,35■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Plxnc1Q9QZC2 1574 aa35,34■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Skint5A7XUY5 1461 aa35,34■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Slc24a1Q91WD8 1130 aa35,33■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Tubgcp6G5E8P0 1769 aa35,33■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Cdk5rap2Q8K389 1822 aa35,33■■■■□ 3,25
Tpm1-216ENSMUST00000113707 Afap1Q80YS6 731 aa35,32■■■■□ 3,24
Tpm1-216ENSMUST00000113707 Fan1Q69ZT1 1020 aa35,28■■■■□ 3,24
Tpm1-216ENSMUST00000113707 Ahdc1Q6PAL7 1594 aaKnown RBP35,27■■■■□ 3,24
Tpm1-216ENSMUST00000113707 CltcQ68FD5 1675 aaKnown RBP35,26■■■■□ 3,24
Tpm1-216ENSMUST00000113707 Nphp4P59240 1425 aa35,26■■■■□ 3,24
Tpm1-216ENSMUST00000113707 AU022751B1B0V2 589 aa35,25■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Exoc6Q8R313 802 aa35,24■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Gtf2e1Q9D0D5 440 aa35,24■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Mrs2Q5NCE8 434 aa35,24■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Itsn2Q9Z0R6 1659 aa35,23■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Arhgap23Q69ZH9 1483 aa35,23■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Wwc2Q6NXJ0 1187 aa35,22■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Usp40Q8BWR4 1235 aa35,22■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Sbno1Q689Z5 1390 aa35,22■■■■□ 3,23
Tpm1-216ENSMUST00000113707 DnmbpQ6TXD4 1580 aa35,21■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Sipa1l1Q8C0T5 1782 aa35,21■■■■□ 3,23
Tpm1-216ENSMUST00000113707 Puf60Q3UEB3 564 aaKnown RBP35,2■■■■□ 3,22
Tpm1-216ENSMUST00000113707 RictorQ6QI06 1708 aa35,18■■■■□ 3,22
Tpm1-216ENSMUST00000113707 Arid4bA2CG63 1314 aaKnown RBP35,18■■■■□ 3,22
Tpm1-216ENSMUST00000113707 Slc52a2Q9D8F3 450 aa35,17■■■■□ 3,22
Tpm1-216ENSMUST00000113707 Myom1Q62234 1667 aaKnown RBP35,17■■■■□ 3,22
Tpm1-216ENSMUST00000113707 PrxO55103 1391 aa35,17■■■■□ 3,22
Tpm1-216ENSMUST00000113707 PnisrA2AJT4 805 aaKnown RBP35,16■■■■□ 3,22
Tpm1-216ENSMUST00000113707 Prrc2bQ7TPM1 1486 aaKnown RBP35,14■■■■□ 3,22
Tpm1-216ENSMUST00000113707 Pank3Q8R2W9 370 aa35,13■■■■□ 3,21
Tpm1-216ENSMUST00000113707 NrdcQ8BHG1 1161 aa35,1■■■■□ 3,21
Tpm1-216ENSMUST00000113707 Tmf1B9EKI3 1091 aa35,09■■■■□ 3,21
Tpm1-216ENSMUST00000113707 Slc4a2P13808 1237 aaKnown RBP35,09■■■■□ 3,21
Tpm1-216ENSMUST00000113707 PtprmP28828 1452 aa35,08■■■■□ 3,21
Tpm1-216ENSMUST00000113707 Lrrc7Q80TE7 1490 aa35,07■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Kif13aQ9EQW7 1749 aa35,06■■■■□ 3,2
Tpm1-216ENSMUST00000113707 PalldQ9ET54 1408 aa35,05■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Znf710Q3U288 666 aa35,05■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Itsn1Q9Z0R4 1714 aa35,03■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Adamtsl3G3UXC7 1706 aa35,02■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Inpp5dQ9ES52 1191 aa35,02■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Dnajc5gQ8C632 165 aa35,01■■■■□ 3,2
Tpm1-216ENSMUST00000113707 Slc4a1apE9PX68 744 aa35,01■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Anp32bQ9EST5 272 aaKnown RBP35,01■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Naip7Q9JIB3 1402 aa35■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Ift172Q6VH22 1749 aa35■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Zscan10Q3URR7 782 aa35■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Fam184bQ0KK56 942 aa34,99■■■■□ 3,19
Tpm1-216ENSMUST00000113707 IqubQ8CDK3 788 aa34,98■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Gm16486A0A1D5RMD1 1434 aa34,97■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Tnnt3Q9QZ47 272 aa34,96■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Stag3O70576 1240 aa34,95■■■■□ 3,19
Tpm1-216ENSMUST00000113707 Med14A2ABV5 1459 aaKnown RBP34,94■■■■□ 3,18
Tpm1-216ENSMUST00000113707 Ercc6l2Q9JIM3 1537 aa34,92■■■■□ 3,18
Tpm1-216ENSMUST00000113707 MaddQ80U28 1577 aa34,89■■■■□ 3,18
Tpm1-216ENSMUST00000113707 Arhgef28P97433 1693 aa34,89■■■■□ 3,18
Tpm1-216ENSMUST00000113707 Shq1Q7TMX5 569 aa34,88■■■■□ 3,17
Tpm1-216ENSMUST00000113707 Atp1b4Q99ME6 356 aa34,88■■■■□ 3,17
Tpm1-216ENSMUST00000113707 Kdm5aQ3UXZ9 1690 aa34,87■■■■□ 3,17
Tpm1-216ENSMUST00000113707 Zc3h13E9Q784 1729 aaKnown RBP34,85■■■■□ 3,17
Tpm1-216ENSMUST00000113707 InsrP15208 1372 aa34,83■■■■□ 3,17
Tpm1-216ENSMUST00000113707 CenpjQ569L8 1344 aa34,82■■■■□ 3,17
Tpm1-216ENSMUST00000113707 Rpgrip1lQ8CG73 1264 aa34,81■■■■□ 3,16
Tpm1-216ENSMUST00000113707 Eif2ak4Q9QZ05 1648 aa34,8■■■■□ 3,16
Tpm1-216ENSMUST00000113707 Safb2Q80YR5 991 aaKnown RBP34,78■■■■□ 3,16
Tpm1-216ENSMUST00000113707 Plppr3Q7TPB0 716 aa34,78■■■■□ 3,16
Tpm1-216ENSMUST00000113707 Stk26Q99JT2 416 aa34,76■■■■□ 3,16
Tpm1-216ENSMUST00000113707 PplQ9R269 1755 aa34,75■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Q9D9H8 365 aa34,74■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Tex14Q7M6U3 1450 aa34,73■■■■□ 3,15
Tpm1-216ENSMUST00000113707 P3h3Q8CG70 732 aa34,73■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Chd2E9PZM4 1827 aaKnown RBP34,73■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Zscan21Q07231 555 aa34,71■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Gemin5Q8BX17 1502 aaKnown RBP34,7■■■■□ 3,15
Tpm1-216ENSMUST00000113707 Plekhg1F6S200 1446 aa34,69■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Cep170bQ80U49 1574 aa34,67■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Dnajc5P60904 198 aa34,67■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Dip2aQ8BWT5 1523 aa34,66■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Rab3gap2Q8BMG7 1366 aa34,66■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Gprasp1Q5U4C1 1347 aa34,66■■■■□ 3,14
Tpm1-216ENSMUST00000113707 Ppp2r1aQ76MZ3 589 aa34,66■■■■□ 3,14
Retrieved 100 of 22,080 RNA–protein pairs in 10,8 ms