RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 Ccdc141E9Q8Q6 1531 aa12.88□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Nap1l1P28656 391 aaKnown RBP12.88□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Cluap1Q8R3P7 413 aa12.88□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Srek1Q8BZX4 494 aaKnown RBP12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Ccdc34Q3UI66 367 aa12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Commd10Q8JZY2 202 aa12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Duox2A2AQ99 1517 aa12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Sf3a1Q8K4Z5 791 aaKnown RBP12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Ifit1bl1D3Z6F0 470 aa12.87□□□□□ -0.35
Col4a3-201ENSMUST00000113457 CrcpO35427 148 aa12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 MycnP03966 462 aaKnown RBP12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Gcc2Q8CHG3 1679 aa12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Prdm16A2A935 1275 aa12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Cplx1P63040 134 aa12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Supt16hQ920B9 1047 aa12.86□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Golga2Q921M4 999 aa12.85□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Rfx7F8VPJ6 1459 aa12.85□□□□□ -0.35
Col4a3-201ENSMUST00000113457 TnnQ80Z71 1560 aa12.85□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Znf710Q3U288 666 aa12.85□□□□□ -0.35
Col4a3-201ENSMUST00000113457 EprsQ8CGC7 1512 aaKnown RBP12.85□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Wdr78E9PYY5 807 aa12.84□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Ipo9Q91YE6 1041 aa12.84□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Chmp5Q9D7S9 219 aa12.84□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Hmgb2P30681 210 aaKnown RBP12.84□□□□□ -0.35
Col4a3-201ENSMUST00000113457 Podxl2Q8CAE9 603 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Cep89Q9CZX2 791 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Lrrcc1Q69ZB0 1026 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Nap1l3Q794H2 544 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Chmp7Q8R1T1 451 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Cabp4Q8VHC5 271 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Cetn4Q8K4K1 168 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Necab1Q8BG18 352 aa12.83□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Chaf1aQ9QWF0 911 aa12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 EspnQ9ET47 871 aa12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Tcerg1Q8CGF7 1100 aaKnown RBP12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Rec8Q8C5S7 591 aa12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Dusp9Q7TNL7 452 aa12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Sh3bgrQ9WUZ7 214 aa12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Nup155Q99P88 1391 aaKnown RBP12.82□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Rbm5Q91YE7 815 aaKnown RBP12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Gcom1E9PZ54 550 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 MyzapQ3UIJ9 466 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Map4P27546 1125 aaKnown RBP12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Gprasp1Q5U4C1 1347 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Dnai1Q8C0M8 701 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Camsap2Q8C1B1 1461 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Dcaf11Q91VU6 549 aa12.81□□□□□ -0.36
Col4a3-201ENSMUST00000113457 PogzQ8BZH4 1409 aaKnown RBP12.8□□□□□ -0.36
Col4a3-201ENSMUST00000113457 A0A0U1RNP2 1173 aa12.8□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Sytl4Q9R0Q1 673 aa12.8□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Egfem1Q8C088 590 aa12.8□□□□□ -0.36
Col4a3-201ENSMUST00000113457 IkQ9Z1M8 557 aaKnown RBP12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Frmpd1A2AKB4 1549 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Eif2s2Q99L45 331 aaKnown RBP12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Taok2Q6ZQ29 1240 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Slc4a3P16283 1227 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Filip1lQ6P6L0 1131 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Arhgap31A6X8Z5 1425 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 ArsiQ32KI9 573 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 VgfQ0VGU4 617 aa12.79□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Pip4k2bQ80XI4 416 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Ksr2Q3UVC0 959 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 St18Q80TY4 1045 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Glipr1l2Q9CQ35 332 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Tceal9Q9DD24 104 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Zscan21Q07231 555 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Pdcl3Q8BVF2 240 aa12.78□□□□□ -0.36
Col4a3-201ENSMUST00000113457 BcanQ61361 883 aa12.77□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Rrbp1Q99PL5 1605 aaKnown RBP12.77□□□□□ -0.36
Col4a3-201ENSMUST00000113457 Dctn1O08788 1281 aa12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Supt6hQ62383 1726 aaKnown RBP12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Znhit6Q3UFB2 460 aaKnown RBP12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Utp3Q9JI13 469 aaKnown RBP12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Pkd2O35245 966 aa12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Stk31Q99MW1 1018 aa12.77□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Rundc1Q0VDN7 615 aa12.76□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Ppip5k1A2ARP1 1436 aa12.76□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Ipo8Q7TMY7 1010 aa12.76□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Trim29Q8R2Q0 587 aa12.76□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Sirt1Q923E4 737 aa12.75□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Neurod6P48986 337 aa12.75□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Kcnj4P52189 445 aa12.75□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Rsph6aQ8CDR2 708 aa12.75□□□□□ -0.37
Col4a3-201ENSMUST00000113457 CalrP14211 416 aaKnown RBP12.75□□□□□ -0.37
Col4a3-201ENSMUST00000113457 PhaxQ9JJT9 385 aaKnown RBP12.74□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Kif1bQ60575 1816 aaKnown RBP12.74□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Soga1E1U8D0 1418 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Cgnl1Q6AW69 1298 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 CenpjQ569L8 1344 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Samd1D3YXK1 519 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Zpr1Q62384 459 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 NexnQ7TPW1 607 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Ccdc146E9Q9F7 977 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Ush1cQ9ES64 910 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Fam135aQ6NS59 1506 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Cfap74Q3UY96 1578 aa12.73□□□□□ -0.37
Col4a3-201ENSMUST00000113457 SlkO54988 1233 aa12.72□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Fbxo2Q80UW2 297 aa12.72□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Abl1P00520 1123 aa12.72□□□□□ -0.37
Col4a3-201ENSMUST00000113457 Taf3Q5HZG4 932 aa12.72□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms