RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Shq1Q7TMX5 569 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Rec8Q8C5S7 591 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Pank1Q8K4K6 548 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Rpgrip1lQ8CG73 1264 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Ccdc30Q8BVF4 654 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Smc3Q9CW03 1217 aaKnown RBP19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Q9D2X8 372 aa19.03■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Cplx2P84086 134 aa19.02■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Dixdc1Q80Y83 711 aa19.02■□□□□ 0.64
Ubr2-201ENSMUST00000113335 FosbP13346 338 aa19.02■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ccdc34Q3UI66 367 aa19.02■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ddx11Q6AXC6 880 aa19.02■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ipo7Q9EPL8 1038 aaKnown RBP19.01■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ric3Q8BPM6 367 aa19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 PogkQ80TC5 607 aa19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Noc3lQ8VI84 807 aaKnown RBP19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Smc4Q8CG47 1286 aa19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Cplx1P63040 134 aa19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Usp16Q99LG0 825 aa19■□□□□ 0.63
Ubr2-201ENSMUST00000113335 AampJ3QN89 436 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Hmox1P14901 289 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 MlecQ6ZQI3 291 aaKnown RBP18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Evc2Q8K1G2 1220 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ipo4Q8VI75 1082 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ccdc183A2AJB1 534 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 CftrP26361 1476 aa18.99■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Rnf20Q5DTM8 973 aa18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Prkrip1Q9CWV6 186 aaKnown RBP18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Mad1l1Q9WTX8 717 aaKnown RBP18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Plcd4Q8K3R3 807 aa18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Nectin2P32507 530 aa18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Nutm1Q8BHP2 1126 aa18.98■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Nol12Q8BG17 217 aa18.97■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Atl3Q91YH5 541 aa18.97■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Hmgn5Q9JL35 406 aa18.97■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Wdr78E9PYY5 807 aa18.97■□□□□ 0.63
Ubr2-201ENSMUST00000113335 A0A1L1SQF0 893 aa18.96■□□□□ 0.63
Ubr2-201ENSMUST00000113335 A0A0U1RNP2 1173 aa18.96■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Rnf214Q8BFU3 668 aaKnown RBP18.96■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Rsph4aQ8BYM7 716 aa18.96■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Hnrnpul1Q8VDM6 859 aaKnown RBP18.96■□□□□ 0.63
Ubr2-201ENSMUST00000113335 Ttll13A4Q9F6 804 aa18.95■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Nek4Q9Z1J2 792 aa18.95■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Pnmal2G3X9N3 661 aa18.95■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Rab11fip3Q8CHD8 1047 aa18.95■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Neurod6P48986 337 aa18.94■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Gpatch3Q8BIY1 525 aa18.94■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Ccdc173A0JLY1 547 aa18.94■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Znhit6Q3UFB2 460 aaKnown RBP18.94■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Rbm25B2RY56 838 aaKnown RBP18.93■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Gm21190A0A0G2JGJ6 266 aa18.92■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Znf710Q3U288 666 aa18.92■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Gnai1B2RSH2 354 aa18.91■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Gnai3Q9DC51 354 aa18.91■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Dhx16G3X8X0 1044 aaKnown RBP18.91■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Pdcl3Q8BVF2 240 aa18.91■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Hook1Q8BIL5 728 aa18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Cetn4Q8K4K1 168 aa18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Chmp7Q8R1T1 451 aa18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Usp48Q3V0C5 1052 aa18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 PhaxQ9JJT9 385 aaKnown RBP18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Zrsr2Q62377 462 aaKnown RBP18.9■□□□□ 0.62
Ubr2-201ENSMUST00000113335 Odf2A3KGV1 830 aaKnown RBP18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Erc2Q6PH08 957 aa18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ccdc43Q9CR29 222 aaKnown RBP18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 EzrP26040 586 aaKnown RBP18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ccp110Q7TSH4 1004 aa18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Cyp46a1Q9WVK8 500 aa18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Plekhh1Q80TI1 1356 aa18.89■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Q8C5K5 320 aa18.88■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Stk11ipQ3TAA7 1072 aa18.88■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Swt1Q9DBQ9 907 aa18.88■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Prm3Q62100 101 aa18.88■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Gprasp1Q5U4C1 1347 aa18.88■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Cecr2E9Q2Z1 1453 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Synj1Q8CHC4 1574 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Gcom1E9PZ54 550 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 MyzapQ3UIJ9 466 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Cc2d2bA0A286YDU8 1405 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ppp2r3aB2RXC8 1150 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Rufy1Q8BIJ7 712 aa18.87■□□□□ 0.61
Ubr2-201ENSMUST00000113335 WrnO09053 1401 aa18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Tnpo1Q8BFY9 898 aaKnown RBP18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ciz1Q8VEH2 845 aa18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Anp32eP97822 260 aaKnown RBP18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ankrd36D3Z4K0 1415 aa18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 ErbinQ80TH2 1402 aa18.86■□□□□ 0.61
Ubr2-201ENSMUST00000113335 CrcpO35427 148 aa18.85■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Cfdp1O88271 295 aaKnown RBP18.85■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Stk3Q9JI10 497 aa18.85■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Ubxn4Q8VCH8 506 aa18.85■□□□□ 0.61
Ubr2-201ENSMUST00000113335 NaspQ99MD9 773 aaKnown RBP18.85■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Cchcr1Q8K2I2 770 aa18.84■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Q7TT23 1179 aa18.84■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Tdrd9Q14BI7 1383 aa18.84■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Fam13bQ8K2H3 851 aa18.83■□□□□ 0.61
Ubr2-201ENSMUST00000113335 Sv2bQ8BG39 683 aa18.83■□□□□ 0.61
Ubr2-201ENSMUST00000113335 SkilQ60665 675 aa18.83■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Ints3Q7TPD0 1041 aaKnown RBP18.83■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Cfap99A0A140LIX9 648 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms