RNA–Protein interactions for RNA: ENSMUST00000111233.7

Limk1-202, Transcript of LIM domain kinase 1, mousemouse

TSL 1 (best) BASIC

Gene Limk1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1-202ENSMUST00000111233 Tex14Q7M6U3 1450 aa13.32□□□□□ -0.28
Limk1-202ENSMUST00000111233 Kif3bQ61771 747 aa13.32□□□□□ -0.28
Limk1-202ENSMUST00000111233 Abcc3B2RX12 1523 aa13.32□□□□□ -0.28
Limk1-202ENSMUST00000111233 Gm20521D3Z5F7 333 aa13.32□□□□□ -0.28
Limk1-202ENSMUST00000111233 ShprhQ7TPQ3 1674 aa13.32□□□□□ -0.28
Limk1-202ENSMUST00000111233 Neurod2Q62414 383 aa13.31□□□□□ -0.28
Limk1-202ENSMUST00000111233 Dbr1Q923B1 550 aa13.31□□□□□ -0.28
Limk1-202ENSMUST00000111233 Chd1P40201 1711 aa13.31□□□□□ -0.28
Limk1-202ENSMUST00000111233 Abcc1O35379 1528 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Robo2Q7TPD3 1470 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Nsd2Q8BVE8 1365 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Ccdc27Q3V036 639 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Neurl4Q5NCX5 1563 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Abcc6Q9R1S7 1498 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Gm16486A0A1D5RMD1 1434 aa13.3□□□□□ -0.28
Limk1-202ENSMUST00000111233 Ttll13A4Q9F6 804 aa13.29□□□□□ -0.28
Limk1-202ENSMUST00000111233 Nlrp6Q91WS2 869 aa13.29□□□□□ -0.28
Limk1-202ENSMUST00000111233 Rab3gap2Q8BMG7 1366 aa13.29□□□□□ -0.28
Limk1-202ENSMUST00000111233 Mink1Q9JM52 1308 aa13.29□□□□□ -0.28
Limk1-202ENSMUST00000111233 Kidins220E9Q9B7 1793 aa13.28□□□□□ -0.28
Limk1-202ENSMUST00000111233 Fan1Q69ZT1 1020 aa13.28□□□□□ -0.28
Limk1-202ENSMUST00000111233 Speer4f1Q9D5Q6 258 aa13.28□□□□□ -0.28
Limk1-202ENSMUST00000111233 Kif7B7ZNG0 1348 aa13.28□□□□□ -0.28
Limk1-202ENSMUST00000111233 Dcaf11Q91VU6 549 aa13.28□□□□□ -0.28
Limk1-202ENSMUST00000111233 Abca8bQ8K440 1620 aa13.27□□□□□ -0.28
Limk1-202ENSMUST00000111233 Cnga1P29974 684 aa13.27□□□□□ -0.28
Limk1-202ENSMUST00000111233 Arid3cA6PWV5 409 aa13.27□□□□□ -0.29
Limk1-202ENSMUST00000111233 Sbno1Q689Z5 1390 aa13.27□□□□□ -0.29
Limk1-202ENSMUST00000111233 Xrn1P97789 1719 aaKnown RBP13.27□□□□□ -0.29
Limk1-202ENSMUST00000111233 Rwdd1Q9CQK7 243 aa13.26□□□□□ -0.29
Limk1-202ENSMUST00000111233 Gtf2e1Q9D0D5 440 aa13.26□□□□□ -0.29
Limk1-202ENSMUST00000111233 Usp40Q8BWR4 1235 aa13.25□□□□□ -0.29
Limk1-202ENSMUST00000111233 Hdac5Q9Z2V6 1113 aa13.25□□□□□ -0.29
Limk1-202ENSMUST00000111233 Srpk2O54781 681 aaKnown RBP13.25□□□□□ -0.29
Limk1-202ENSMUST00000111233 Abca17E9PX95 1733 aa13.24□□□□□ -0.29
Limk1-202ENSMUST00000111233 Arid4bA2CG63 1314 aaKnown RBP13.23□□□□□ -0.29
Limk1-202ENSMUST00000111233 Kiaa1210E9Q0C6 1637 aa13.23□□□□□ -0.29
Limk1-202ENSMUST00000111233 Plppr3Q7TPB0 716 aa13.23□□□□□ -0.29
Limk1-202ENSMUST00000111233 TnikP83510 1323 aa13.23□□□□□ -0.29
Limk1-202ENSMUST00000111233 Myo5cE9Q1F5 1742 aa13.22□□□□□ -0.29
Limk1-202ENSMUST00000111233 Plekhh1Q80TI1 1356 aa13.22□□□□□ -0.29
Limk1-202ENSMUST00000111233 Ylpm1Q9R0I7 1386 aaKnown RBP13.22□□□□□ -0.29
Limk1-202ENSMUST00000111233 ErbinQ80TH2 1402 aa13.21□□□□□ -0.29
Limk1-202ENSMUST00000111233 Pola1P33609 1465 aa13.21□□□□□ -0.29
Limk1-202ENSMUST00000111233 Ttc21bQ0HA38 1315 aa13.21□□□□□ -0.29
Limk1-202ENSMUST00000111233 Ccdc30Q8BVF4 654 aa13.21□□□□□ -0.29
Limk1-202ENSMUST00000111233 Iqcf3Q9D498 203 aa13.2□□□□□ -0.3
Limk1-202ENSMUST00000111233 CanxP35564 591 aaKnown RBP13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Mbd3Q9Z2D8 285 aaKnown RBP13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Uggt2E9Q4X2 1504 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Gas2l2Q5SSG4 860 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Chmp5Q9D7S9 219 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Itsn2Q9Z0R6 1659 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Kdm2bQ6P1G2 1309 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Kdm5aQ3UXZ9 1690 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Col17a1Q07563 1470 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Golga2Q921M4 999 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Lemd3Q9WU40 921 aa13.19□□□□□ -0.3
Limk1-202ENSMUST00000111233 Usp19Q3UJD6 1360 aa13.18□□□□□ -0.3
Limk1-202ENSMUST00000111233 Myo3aQ8K3H5 1613 aa13.18□□□□□ -0.3
Limk1-202ENSMUST00000111233 Atf7ipQ7TT18 1306 aa13.18□□□□□ -0.3
Limk1-202ENSMUST00000111233 Abca6Q8K441 1624 aa13.17□□□□□ -0.3
Limk1-202ENSMUST00000111233 EspnQ9ET47 871 aa13.17□□□□□ -0.3
Limk1-202ENSMUST00000111233 Clasp1Q80TV8 1535 aaKnown RBP13.17□□□□□ -0.3
Limk1-202ENSMUST00000111233 Tspyl2Q7TQI8 677 aa13.17□□□□□ -0.3
Limk1-202ENSMUST00000111233 Ttc41Q692V3 1318 aa13.16□□□□□ -0.3
Limk1-202ENSMUST00000111233 AnkarA2RT91 1465 aa13.15□□□□□ -0.3
Limk1-202ENSMUST00000111233 Polr3glQ8R0C0 218 aa13.15□□□□□ -0.3
Limk1-202ENSMUST00000111233 Puf60Q3UEB3 564 aaKnown RBP13.15□□□□□ -0.31
Limk1-202ENSMUST00000111233 Ythdc2B2RR83 1445 aaKnown RBP13.14□□□□□ -0.31
Limk1-202ENSMUST00000111233 Hsp90aa1P07901 733 aaKnown RBP13.14□□□□□ -0.31
Limk1-202ENSMUST00000111233 Cep152A2AUM9 1736 aaKnown RBP13.14□□□□□ -0.31
Limk1-202ENSMUST00000111233 AatkQ80YE4 1365 aa13.14□□□□□ -0.31
Limk1-202ENSMUST00000111233 Iqgap3F8VQ29 1632 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Pank1Q8K4K6 548 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Kiaa1107Q80TK0 1369 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Fndc1E9Q043 1732 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 DaxxO35613 739 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Nos1Q9Z0J4 1429 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Cdk5rap2Q8K389 1822 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Stag3O70576 1240 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Nkx1-2P42580 305 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Atxn3Q9CVD2 355 aa13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Sart3Q9JLI8 962 aaKnown RBP13.13□□□□□ -0.31
Limk1-202ENSMUST00000111233 Igf1rQ60751 1373 aa13.12□□□□□ -0.31
Limk1-202ENSMUST00000111233 Zfyve16Q80U44 1528 aa13.12□□□□□ -0.31
Limk1-202ENSMUST00000111233 4930567H17RikQ3V0K5 233 aa13.12□□□□□ -0.31
Limk1-202ENSMUST00000111233 Trim26Q99PN3 545 aa13.12□□□□□ -0.31
Limk1-202ENSMUST00000111233 Abca9Q8K449 1623 aa13.12□□□□□ -0.31
Limk1-202ENSMUST00000111233 NudcO35685 332 aaKnown RBP13.11□□□□□ -0.31
Limk1-202ENSMUST00000111233 Trim30dE9PWL0 497 aa13.11□□□□□ -0.31
Limk1-202ENSMUST00000111233 Smc5Q8CG46 1101 aaKnown RBP13.11□□□□□ -0.31
Limk1-202ENSMUST00000111233 Armcx1Q9CX83 456 aa13.11□□□□□ -0.31
Limk1-202ENSMUST00000111233 Nphp4P59240 1425 aa13.1□□□□□ -0.31
Limk1-202ENSMUST00000111233 ArxO35085 564 aa13.1□□□□□ -0.31
Limk1-202ENSMUST00000111233 Stard8Q8K031 1019 aa13.1□□□□□ -0.31
Limk1-202ENSMUST00000111233 Uspl1Q3ULM6 1089 aa13.09□□□□□ -0.31
Limk1-202ENSMUST00000111233 Znf518aB2RRF6 1478 aaKnown RBP13.09□□□□□ -0.31
Limk1-202ENSMUST00000111233 Myom1Q62234 1667 aaKnown RBP13.09□□□□□ -0.31
Limk1-202ENSMUST00000111233 Prex1Q69ZK0 1650 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms