RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Kif16bB1AVY7 1312 aa9.73□□□□□ -0.85
Bdnf-207ENSMUST00000111047 Usp40Q8BWR4 1235 aa9.73□□□□□ -0.85
Bdnf-207ENSMUST00000111047 Fmn2Q9JL04 1578 aa9.73□□□□□ -0.85
Bdnf-207ENSMUST00000111047 AampJ3QN89 436 aa9.72□□□□□ -0.85
Bdnf-207ENSMUST00000111047 Rab3gap2Q8BMG7 1366 aa9.72□□□□□ -0.85
Bdnf-207ENSMUST00000111047 ErbinQ80TH2 1402 aa9.71□□□□□ -0.85
Bdnf-207ENSMUST00000111047 Supt6hQ62383 1726 aaKnown RBP9.71□□□□□ -0.86
Bdnf-207ENSMUST00000111047 ChgaP26339 463 aaKnown RBP9.71□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Trim26Q99PN3 545 aa9.71□□□□□ -0.86
Bdnf-207ENSMUST00000111047 ArxO35085 564 aa9.7□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Ppm1gQ61074 542 aa9.7□□□□□ -0.86
Bdnf-207ENSMUST00000111047 AI481877A2ALV5 1481 aa9.7□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Mroh2aD3Z750 1679 aa9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Znf692Q3U381 531 aa9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Kif21bQ9QXL1 1668 aa9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Ttll13A4Q9F6 804 aa9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Hsp90ab1P11499 724 aaKnown RBP9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Exosc9Q9JHI7 438 aaKnown RBP9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Rusc2Q80U22 1514 aa9.69□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Plekhh1Q80TI1 1356 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Ccdc30Q8BVF4 654 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Lrriq1Q0P5X1 1673 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Sall3Q62255 1320 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Mapk8ip3Q9ESN9 1337 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 NgefQ8CHT1 710 aa9.68□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Atp10dQ8K2X1 1416 aa9.67□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Trpm2Q91YD4 1506 aa9.67□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Zmym4A2A791 1549 aaKnown RBP9.67□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Dnai1Q8C0M8 701 aa9.67□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Rrbp1Q99PL5 1605 aaKnown RBP9.67□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Cfap74Q3UY96 1578 aa9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Rangap1P46061 589 aaKnown RBP9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Ralbp1Q62172 648 aa9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Erbb3Q61526 1339 aa9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Dot1lQ6XZL8 1540 aa9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 4930567H17RikQ3V0K5 233 aa9.66□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Setd1bQ8CFT2 1985 aa9.65□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Fam208aQ69ZR9 1610 aaKnown RBP9.65□□□□□ -0.86
Bdnf-207ENSMUST00000111047 Egfem1Q8C088 590 aa9.65□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Puf60Q3UEB3 564 aaKnown RBP9.64□□□□□ -0.87
Bdnf-207ENSMUST00000111047 U2af1Q9D883 239 aaKnown RBP9.64□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Ppip5k1A2ARP1 1436 aa9.64□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Ylpm1Q9R0I7 1386 aaKnown RBP9.64□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Armcx1Q9CX83 456 aa9.64□□□□□ -0.87
Bdnf-207ENSMUST00000111047 NudcO35685 332 aaKnown RBP9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Ttc21bQ0HA38 1315 aa9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Igf1rQ60751 1373 aa9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Stk26Q99JT2 416 aa9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 BccipQ9CWI3 316 aa9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 GsdmaQ9EST1 446 aa9.63□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Sbno1Q689Z5 1390 aa9.62□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Scaf1Q5U4C3 1256 aaKnown RBP9.62□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Ipo8Q7TMY7 1010 aa9.62□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Dnmt1P13864 1620 aaKnown RBP9.61□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Tarbp1E9Q368 1579 aa9.61□□□□□ -0.87
Bdnf-207ENSMUST00000111047 CenpjQ569L8 1344 aa9.61□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Ksr2Q3UVC0 959 aa9.61□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Edc4Q3UJB9 1406 aaKnown RBP9.61□□□□□ -0.87
Bdnf-207ENSMUST00000111047 CatipB9EKE5 520 aa9.6□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Kdm5cP41230 1554 aa9.6□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Mast1Q9R1L5 1570 aa9.6□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Eif4g3Q80XI3 1579 aaKnown RBP9.6□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Atf7ipQ7TT18 1306 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Trim58Q5NCC9 485 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Tsen2Q6P7W5 460 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Sart3Q9JLI8 962 aaKnown RBP9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Abcc6Q9R1S7 1498 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Abcc1O35379 1528 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Mink1Q9JM52 1308 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Pank1Q8K4K6 548 aa9.59□□□□□ -0.87
Bdnf-207ENSMUST00000111047 Tex14Q7M6U3 1450 aa9.58□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Iqcf3Q9D498 203 aa9.58□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Chrna2Q91X60 512 aa9.58□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Gapvd1Q6PAR5 1458 aa9.58□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Ccar1Q8CH18 1146 aaKnown RBP9.58□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Htatsf1Q8BGC0 757 aa9.57□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Gm16486A0A1D5RMD1 1434 aa9.57□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Iqgap1Q9JKF1 1657 aaKnown RBP9.56□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Ak7Q9D2H2 614 aa9.56□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Mre11Q61216 706 aa9.56□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Rnf17Q99MV7 1640 aa9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Cluap1Q8R3P7 413 aa9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 TnikP83510 1323 aa9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Gm6268A2A3U9 297 aa9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Smc5Q8CG46 1101 aaKnown RBP9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Eif2s2Q99L45 331 aaKnown RBP9.55□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Gm32742A0A1B0GT42 1604 aa9.54□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Map7O88735 730 aa9.54□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Tspyl2Q7TQI8 677 aa9.54□□□□□ -0.88
Bdnf-207ENSMUST00000111047 DmtnQ9WV69 405 aa9.54□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Apaf1O88879 1249 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Setd1aE9PYH6 1716 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Cald1E9QA15 768 aaKnown RBP9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Neurl4Q5NCX5 1563 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Shq1Q7TMX5 569 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Plch2A2AP18 1501 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Tulp4Q9JIL5 1547 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Ythdc2B2RR83 1445 aaKnown RBP9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Ccdc183A2AJB1 534 aa9.53□□□□□ -0.88
Bdnf-207ENSMUST00000111047 Cep170Q6A065 1588 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms