RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ppp2r1aQ76MZ3 589 aa17.02■□□□□ 0.32
Nup88-203ENSMUST00000108531 Rab3gap2Q8BMG7 1366 aa17.02■□□□□ 0.32
Nup88-203ENSMUST00000108531 Abcc6Q9R1S7 1498 aa17.02■□□□□ 0.32
Nup88-203ENSMUST00000108531 Abca17E9PX95 1733 aa17.02■□□□□ 0.31
Nup88-203ENSMUST00000108531 Esx1O88933 382 aa17.02■□□□□ 0.31
Nup88-203ENSMUST00000108531 Srcin1Q9QWI6 1250 aa17.02■□□□□ 0.31
Nup88-203ENSMUST00000108531 Map3k5O35099 1380 aa17.01■□□□□ 0.31
Nup88-203ENSMUST00000108531 Slc4a1apE9PX68 744 aa17.01■□□□□ 0.31
Nup88-203ENSMUST00000108531 Atf7ipQ7TT18 1306 aa17■□□□□ 0.31
Nup88-203ENSMUST00000108531 Uggt2E9Q4X2 1504 aa17■□□□□ 0.31
Nup88-203ENSMUST00000108531 Fam184bQ0KK56 942 aa16.99■□□□□ 0.31
Nup88-203ENSMUST00000108531 Itsn2Q9Z0R6 1659 aa16.99■□□□□ 0.31
Nup88-203ENSMUST00000108531 CrbnQ8C7D2 445 aa16.98■□□□□ 0.31
Nup88-203ENSMUST00000108531 Atp10dQ8K2X1 1416 aa16.98■□□□□ 0.31
Nup88-203ENSMUST00000108531 Ttll13A4Q9F6 804 aa16.97■□□□□ 0.31
Nup88-203ENSMUST00000108531 Plekhh1Q80TI1 1356 aa16.97■□□□□ 0.31
Nup88-203ENSMUST00000108531 Kidins220E9Q9B7 1793 aa16.96■□□□□ 0.31
Nup88-203ENSMUST00000108531 Xrn1P97789 1719 aaKnown RBP16.96■□□□□ 0.31
Nup88-203ENSMUST00000108531 Erich6D3Z6S9 713 aa16.95■□□□□ 0.3
Nup88-203ENSMUST00000108531 Abcc1O35379 1528 aa16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Ylpm1Q9R0I7 1386 aaKnown RBP16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Kdm2bQ6P1G2 1309 aa16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Col17a1Q07563 1470 aa16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Kdm2aP59997 1161 aa16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Rwdd1Q9CQK7 243 aa16.94■□□□□ 0.3
Nup88-203ENSMUST00000108531 Zmym3Q9JLM4 1370 aa16.93■□□□□ 0.3
Nup88-203ENSMUST00000108531 Chd1P40201 1711 aa16.93■□□□□ 0.3
Nup88-203ENSMUST00000108531 ChgaP26339 463 aaKnown RBP16.93■□□□□ 0.3
Nup88-203ENSMUST00000108531 Iqcf3Q9D498 203 aa16.93■□□□□ 0.3
Nup88-203ENSMUST00000108531 Ccdc9Q8VC31 543 aaKnown RBP16.92■□□□□ 0.3
Nup88-203ENSMUST00000108531 Cep152A2AUM9 1736 aaKnown RBP16.91■□□□□ 0.3
Nup88-203ENSMUST00000108531 Myo5cE9Q1F5 1742 aa16.91■□□□□ 0.3
Nup88-203ENSMUST00000108531 Kdm5aQ3UXZ9 1690 aa16.9■□□□□ 0.3
Nup88-203ENSMUST00000108531 Sall3Q62255 1320 aa16.9■□□□□ 0.3
Nup88-203ENSMUST00000108531 Hsp90aa1P07901 733 aaKnown RBP16.9■□□□□ 0.3
Nup88-203ENSMUST00000108531 Kif7B7ZNG0 1348 aa16.88■□□□□ 0.29
Nup88-203ENSMUST00000108531 B4galnt3Q6L8S8 986 aa16.88■□□□□ 0.29
Nup88-203ENSMUST00000108531 Usp19Q3UJD6 1360 aa16.88■□□□□ 0.29
Nup88-203ENSMUST00000108531 Os9Q8K2C7 672 aa16.88■□□□□ 0.29
Nup88-203ENSMUST00000108531 EspnQ9ET47 871 aa16.88■□□□□ 0.29
Nup88-203ENSMUST00000108531 Zfyve16Q80U44 1528 aa16.87■□□□□ 0.29
Nup88-203ENSMUST00000108531 Gm20521D3Z5F7 333 aa16.87■□□□□ 0.29
Nup88-203ENSMUST00000108531 Speer4f1Q9D5Q6 258 aa16.86■□□□□ 0.29
Nup88-203ENSMUST00000108531 Stard8Q8K031 1019 aa16.86■□□□□ 0.29
Nup88-203ENSMUST00000108531 Nlrp6Q91WS2 869 aa16.86■□□□□ 0.29
Nup88-203ENSMUST00000108531 Tmem131lQ3U3D7 1597 aa16.85■□□□□ 0.29
Nup88-203ENSMUST00000108531 ErbinQ80TH2 1402 aa16.85■□□□□ 0.29
Nup88-203ENSMUST00000108531 Gtf2e1Q9D0D5 440 aa16.85■□□□□ 0.29
Nup88-203ENSMUST00000108531 Nkx1-2P42580 305 aa16.85■□□□□ 0.29
Nup88-203ENSMUST00000108531 Ccdc30Q8BVF4 654 aa16.85■□□□□ 0.29
Nup88-203ENSMUST00000108531 Znf608Q56A10 1511 aa16.84■□□□□ 0.29
Nup88-203ENSMUST00000108531 Iqgap3F8VQ29 1632 aa16.84■□□□□ 0.29
Nup88-203ENSMUST00000108531 Fndc1E9Q043 1732 aa16.84■□□□□ 0.29
Nup88-203ENSMUST00000108531 Nos1Q9Z0J4 1429 aa16.83■□□□□ 0.29
Nup88-203ENSMUST00000108531 Nphp4P59240 1425 aa16.83■□□□□ 0.28
Nup88-203ENSMUST00000108531 Kif3bQ61771 747 aa16.82■□□□□ 0.28
Nup88-203ENSMUST00000108531 Chmp5Q9D7S9 219 aa16.82■□□□□ 0.28
Nup88-203ENSMUST00000108531 Rims1Q99NE5 1463 aa16.82■□□□□ 0.28
Nup88-203ENSMUST00000108531 CanxP35564 591 aaKnown RBP16.82■□□□□ 0.28
Nup88-203ENSMUST00000108531 Myo3aQ8K3H5 1613 aa16.82■□□□□ 0.28
Nup88-203ENSMUST00000108531 Ttc21bQ0HA38 1315 aa16.81■□□□□ 0.28
Nup88-203ENSMUST00000108531 Abca6Q8K441 1624 aa16.81■□□□□ 0.28
Nup88-203ENSMUST00000108531 Abca8aQ8K442 1620 aa16.81■□□□□ 0.28
Nup88-203ENSMUST00000108531 Smc5Q8CG46 1101 aaKnown RBP16.81■□□□□ 0.28
Nup88-203ENSMUST00000108531 Apbb1Q9QXJ1 710 aa16.81■□□□□ 0.28
Nup88-203ENSMUST00000108531 Usp40Q8BWR4 1235 aa16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Dcaf11Q91VU6 549 aa16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Myom1Q62234 1667 aaKnown RBP16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Mapk8ip3Q9ESN9 1337 aa16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 NudcO35685 332 aaKnown RBP16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Srpk2O54781 681 aaKnown RBP16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Dbr1Q923B1 550 aa16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 Igf1rQ60751 1373 aa16.8■□□□□ 0.28
Nup88-203ENSMUST00000108531 PrkcshO08795 521 aa16.79■□□□□ 0.28
Nup88-203ENSMUST00000108531 Neurod2Q62414 383 aa16.79■□□□□ 0.28
Nup88-203ENSMUST00000108531 Znf518aB2RRF6 1478 aaKnown RBP16.79■□□□□ 0.28
Nup88-203ENSMUST00000108531 Cdk5rap2Q8K389 1822 aa16.79■□□□□ 0.28
Nup88-203ENSMUST00000108531 Talpid3E9PV87 1520 aa16.78■□□□□ 0.28
Nup88-203ENSMUST00000108531 Golga2Q921M4 999 aa16.78■□□□□ 0.28
Nup88-203ENSMUST00000108531 Gprasp1Q5U4C1 1347 aa16.78■□□□□ 0.28
Nup88-203ENSMUST00000108531 Fan1Q69ZT1 1020 aa16.77■□□□□ 0.28
Nup88-203ENSMUST00000108531 Stk24Q99KH8 431 aa16.77■□□□□ 0.28
Nup88-203ENSMUST00000108531 DnmbpQ6TXD4 1580 aa16.77■□□□□ 0.28
Nup88-203ENSMUST00000108531 Abca9Q8K449 1623 aa16.77■□□□□ 0.28
Nup88-203ENSMUST00000108531 Ralbp1Q62172 648 aa16.77■□□□□ 0.27
Nup88-203ENSMUST00000108531 Kiaa1107Q80TK0 1369 aa16.77■□□□□ 0.27
Nup88-203ENSMUST00000108531 Trpm1Q2TV84 1622 aa16.76■□□□□ 0.27
Nup88-203ENSMUST00000108531 Dnai1Q8C0M8 701 aa16.76■□□□□ 0.27
Nup88-203ENSMUST00000108531 Adgrb3Q80ZF8 1522 aa16.75■□□□□ 0.27
Nup88-203ENSMUST00000108531 Myom2Q14BI5 1463 aa16.75■□□□□ 0.27
Nup88-203ENSMUST00000108531 AatkQ80YE4 1365 aa16.74■□□□□ 0.27
Nup88-203ENSMUST00000108531 Uspl1Q3ULM6 1089 aa16.74■□□□□ 0.27
Nup88-203ENSMUST00000108531 Sart3Q9JLI8 962 aaKnown RBP16.74■□□□□ 0.27
Nup88-203ENSMUST00000108531 Ppm1gQ61074 542 aa16.74■□□□□ 0.27
Nup88-203ENSMUST00000108531 Uggt1Q6P5E4 1551 aa16.74■□□□□ 0.27
Nup88-203ENSMUST00000108531 Ehbp1l1Q99MS7 1716 aa16.73■□□□□ 0.27
Nup88-203ENSMUST00000108531 Prex1Q69ZK0 1650 aa16.72■□□□□ 0.27
Nup88-203ENSMUST00000108531 DaxxO35613 739 aa16.72■□□□□ 0.27
Nup88-203ENSMUST00000108531 Lemd3Q9WU40 921 aa16.72■□□□□ 0.27
Nup88-203ENSMUST00000108531 Efcab6Q6P1E8 1516 aa16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms