RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Mroh1E0CZ22 1640 aa28.39■■■□□ 2.14
Trim3-203ENSMUST00000106791 Dip2bQ3UH60 1574 aa28.38■■■□□ 2.13
Trim3-203ENSMUST00000106791 MyclP10166 368 aa28.36■■■□□ 2.13
Trim3-203ENSMUST00000106791 Aebp2Q9Z248 504 aaKnown RBP28.33■■■□□ 2.13
Trim3-203ENSMUST00000106791 Itsn1Q9Z0R4 1714 aa28.33■■■□□ 2.12
Trim3-203ENSMUST00000106791 Cdk13Q69ZA1 1511 aaKnown RBP28.32■■■□□ 2.12
Trim3-203ENSMUST00000106791 Rims1Q99NE5 1463 aa28.32■■■□□ 2.12
Trim3-203ENSMUST00000106791 Dapk1Q80YE7 1442 aa28.31■■■□□ 2.12
Trim3-203ENSMUST00000106791 PtprmP28828 1452 aa28.31■■■□□ 2.12
Trim3-203ENSMUST00000106791 Prrc2bQ7TPM1 1486 aaKnown RBP28.31■■■□□ 2.12
Trim3-203ENSMUST00000106791 4930407I10RikD3Z5T8 1512 aa28.31■■■□□ 2.12
Trim3-203ENSMUST00000106791 Naip7Q9JIB3 1402 aa28.31■■■□□ 2.12
Trim3-203ENSMUST00000106791 Kif13aQ9EQW7 1749 aa28.3■■■□□ 2.12
Trim3-203ENSMUST00000106791 Bcl9Q9D219 1425 aa28.28■■■□□ 2.12
Trim3-203ENSMUST00000106791 AU022751B1B0V2 589 aa28.28■■■□□ 2.12
Trim3-203ENSMUST00000106791 Kdm5aQ3UXZ9 1690 aa28.25■■■□□ 2.11
Trim3-203ENSMUST00000106791 Rundc1Q0VDN7 615 aa28.25■■■□□ 2.11
Trim3-203ENSMUST00000106791 Plxnc1Q9QZC2 1574 aa28.25■■■□□ 2.11
Trim3-203ENSMUST00000106791 Kdm2aP59997 1161 aa28.23■■■□□ 2.11
Trim3-203ENSMUST00000106791 Chd2E9PZM4 1827 aaKnown RBP28.22■■■□□ 2.11
Trim3-203ENSMUST00000106791 RalgapbQ8BQZ4 1484 aa28.21■■■□□ 2.11
Trim3-203ENSMUST00000106791 Cep152A2AUM9 1736 aaKnown RBP28.21■■■□□ 2.11
Trim3-203ENSMUST00000106791 Wdr66E9Q743 1299 aa28.2■■■□□ 2.11
Trim3-203ENSMUST00000106791 Card11Q8CIS0 1159 aa28.19■■■□□ 2.1
Trim3-203ENSMUST00000106791 Myo3aQ8K3H5 1613 aa28.18■■■□□ 2.1
Trim3-203ENSMUST00000106791 Srpk2O54781 681 aaKnown RBP28.17■■■□□ 2.1
Trim3-203ENSMUST00000106791 Gm20521D3Z5F7 333 aa28.15■■■□□ 2.1
Trim3-203ENSMUST00000106791 Myom1Q62234 1667 aaKnown RBP28.15■■■□□ 2.1
Trim3-203ENSMUST00000106791 Os9Q8K2C7 672 aa28.14■■■□□ 2.1
Trim3-203ENSMUST00000106791 Gemin5Q8BX17 1502 aaKnown RBP28.12■■■□□ 2.09
Trim3-203ENSMUST00000106791 Txndc2Q6P902 515 aa28.12■■■□□ 2.09
Trim3-203ENSMUST00000106791 Slc52a2Q9D8F3 450 aa28.12■■■□□ 2.09
Trim3-203ENSMUST00000106791 Fan1Q69ZT1 1020 aa28.12■■■□□ 2.09
Trim3-203ENSMUST00000106791 GphnQ8BUV3 769 aaKnown RBP28.11■■■□□ 2.09
Trim3-203ENSMUST00000106791 P3h3Q8CG70 732 aa28.11■■■□□ 2.09
Trim3-203ENSMUST00000106791 Sin3aQ60520 1274 aaKnown RBP28.11■■■□□ 2.09
Trim3-203ENSMUST00000106791 Zc3h13E9Q784 1729 aaKnown RBP28.09■■■□□ 2.09
Trim3-203ENSMUST00000106791 Topaz1E5FYH1 1653 aa28.08■■■□□ 2.09
Trim3-203ENSMUST00000106791 Psme1P97371 249 aa28.06■■■□□ 2.08
Trim3-203ENSMUST00000106791 Atp1b4Q99ME6 356 aa28.06■■■□□ 2.08
Trim3-203ENSMUST00000106791 PplQ9R269 1755 aa28.06■■■□□ 2.08
Trim3-203ENSMUST00000106791 Puf60Q3UEB3 564 aaKnown RBP28.06■■■□□ 2.08
Trim3-203ENSMUST00000106791 Cwc22Q8C5N3 908 aaKnown RBP28.05■■■□□ 2.08
Trim3-203ENSMUST00000106791 Cdk5rap2Q8K389 1822 aa28.04■■■□□ 2.08
Trim3-203ENSMUST00000106791 Shq1Q7TMX5 569 aa28.04■■■□□ 2.08
Trim3-203ENSMUST00000106791 ClspnQ80YR7 1315 aa28.02■■■□□ 2.08
Trim3-203ENSMUST00000106791 Arhgef28P97433 1693 aa28.02■■■□□ 2.08
Trim3-203ENSMUST00000106791 Eif2ak4Q9QZ05 1648 aa27.99■■■□□ 2.07
Trim3-203ENSMUST00000106791 Brwd3A2AHJ4 1799 aa27.99■■■□□ 2.07
Trim3-203ENSMUST00000106791 Q9D9H8 365 aa27.99■■■□□ 2.07
Trim3-203ENSMUST00000106791 Stard8Q8K031 1019 aa27.98■■■□□ 2.07
Trim3-203ENSMUST00000106791 Usp40Q8BWR4 1235 aa27.98■■■□□ 2.07
Trim3-203ENSMUST00000106791 Arid4bA2CG63 1314 aaKnown RBP27.97■■■□□ 2.07
Trim3-203ENSMUST00000106791 Gm13695A2AK44 830 aa27.97■■■□□ 2.07
Trim3-203ENSMUST00000106791 Srcin1Q9QWI6 1250 aa27.97■■■□□ 2.07
Trim3-203ENSMUST00000106791 Ncoa1P70365 1447 aa27.96■■■□□ 2.07
Trim3-203ENSMUST00000106791 Rock2P70336 1388 aa27.96■■■□□ 2.07
Trim3-203ENSMUST00000106791 Setd1aE9PYH6 1716 aa27.96■■■□□ 2.07
Trim3-203ENSMUST00000106791 Lrrc7Q80TE7 1490 aa27.96■■■□□ 2.07
Trim3-203ENSMUST00000106791 Nphp4P59240 1425 aa27.96■■■□□ 2.07
Trim3-203ENSMUST00000106791 PalldQ9ET54 1408 aa27.94■■■□□ 2.06
Trim3-203ENSMUST00000106791 Dip2aQ8BWT5 1523 aa27.94■■■□□ 2.06
Trim3-203ENSMUST00000106791 IghaA0A0A6YXW6 389 aa27.93■■■□□ 2.06
Trim3-203ENSMUST00000106791 Gtf2e1Q9D0D5 440 aa27.93■■■□□ 2.06
Trim3-203ENSMUST00000106791 DnmbpQ6TXD4 1580 aa27.92■■■□□ 2.06
Trim3-203ENSMUST00000106791 MaddQ80U28 1577 aa27.92■■■□□ 2.06
Trim3-203ENSMUST00000106791 Sipa1l1Q8C0T5 1782 aa27.92■■■□□ 2.06
Trim3-203ENSMUST00000106791 Asxl2Q8BZ32 1370 aa27.91■■■□□ 2.06
Trim3-203ENSMUST00000106791 Sall2Q9QX96 1004 aa27.91■■■□□ 2.06
Trim3-203ENSMUST00000106791 Lmtk3Q5XJV6 1424 aa27.9■■■□□ 2.06
Trim3-203ENSMUST00000106791 Slit3Q9WVB4 1523 aa27.9■■■□□ 2.06
Trim3-203ENSMUST00000106791 Zbtb4Q5F293 982 aa27.9■■■□□ 2.06
Trim3-203ENSMUST00000106791 Supt5hO55201 1082 aaKnown RBP27.88■■■□□ 2.05
Trim3-203ENSMUST00000106791 Scaf11E9PZM7 1456 aaKnown RBP27.87■■■□□ 2.05
Trim3-203ENSMUST00000106791 IqubQ8CDK3 788 aa27.86■■■□□ 2.05
Trim3-203ENSMUST00000106791 Pola1P33609 1465 aa27.86■■■□□ 2.05
Trim3-203ENSMUST00000106791 Rimbp3Q3V0F0 1606 aa27.86■■■□□ 2.05
Trim3-203ENSMUST00000106791 Stk26Q99JT2 416 aa27.85■■■□□ 2.05
Trim3-203ENSMUST00000106791 Stag3O70576 1240 aa27.84■■■□□ 2.05
Trim3-203ENSMUST00000106791 PzpQ61838 1495 aa27.83■■■□□ 2.05
Trim3-203ENSMUST00000106791 Utp14aQ640M1 767 aaKnown RBP27.81■■■□□ 2.04
Trim3-203ENSMUST00000106791 Rims2Q9EQZ7 1530 aa27.79■■■□□ 2.04
Trim3-203ENSMUST00000106791 Ift172Q6VH22 1749 aa27.78■■■□□ 2.04
Trim3-203ENSMUST00000106791 Pik3r4Q8VD65 1358 aa27.78■■■□□ 2.04
Trim3-203ENSMUST00000106791 Plekhg5Q66T02 1073 aa27.78■■■□□ 2.04
Trim3-203ENSMUST00000106791 Plekhg1F6S200 1446 aa27.77■■■□□ 2.04
Trim3-203ENSMUST00000106791 Cep170bQ80U49 1574 aa27.76■■■□□ 2.03
Trim3-203ENSMUST00000106791 Phlpp1Q8CHE4 1687 aa27.72■■■□□ 2.03
Trim3-203ENSMUST00000106791 Itsn2Q9Z0R6 1659 aa27.72■■■□□ 2.03
Trim3-203ENSMUST00000106791 Arap3Q8R5G7 1538 aa27.72■■■□□ 2.03
Trim3-203ENSMUST00000106791 Mapk8ip2Q9ERE9 830 aa27.7■■■□□ 2.02
Trim3-203ENSMUST00000106791 Cps1Q8C196 1500 aa27.68■■■□□ 2.02
Trim3-203ENSMUST00000106791 CenpjQ569L8 1344 aa27.68■■■□□ 2.02
Trim3-203ENSMUST00000106791 Gm16486A0A1D5RMD1 1434 aa27.66■■■□□ 2.02
Trim3-203ENSMUST00000106791 HnrnpmQ9D0E1 729 aaKnown RBP27.66■■■□□ 2.02
Trim3-203ENSMUST00000106791 Scn4aQ9ER60 1841 aa27.65■■■□□ 2.02
Trim3-203ENSMUST00000106791 Slc24a1Q91WD8 1130 aa27.65■■■□□ 2.02
Trim3-203ENSMUST00000106791 Med1Q925J9 1575 aa27.65■■■□□ 2.02
Trim3-203ENSMUST00000106791 Atp2b2Q9R0K7 1198 aa27.63■■■□□ 2.01
Trim3-203ENSMUST00000106791 Cyb5rlB1AS42 316 aa27.62■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms