RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Supt5hO55201 1082 aaKnown RBP27.18■■□□□ 1.94
Ttc39a-203ENSMUST00000106619 Med14A2ABV5 1459 aaKnown RBP27.16■■□□□ 1.94
Ttc39a-203ENSMUST00000106619 Mroh1E0CZ22 1640 aa27.15■■□□□ 1.94
Ttc39a-203ENSMUST00000106619 RalgapbQ8BQZ4 1484 aa27.15■■□□□ 1.94
Ttc39a-203ENSMUST00000106619 Rims1Q99NE5 1463 aa27.14■■□□□ 1.94
Ttc39a-203ENSMUST00000106619 Safb2Q80YR5 991 aaKnown RBP27.14■■□□□ 1.93
Ttc39a-203ENSMUST00000106619 Sall2Q9QX96 1004 aa27.13■■□□□ 1.93
Ttc39a-203ENSMUST00000106619 Rundc1Q0VDN7 615 aa27.12■■□□□ 1.93
Ttc39a-203ENSMUST00000106619 Cep152A2AUM9 1736 aaKnown RBP27.08■■□□□ 1.93
Ttc39a-203ENSMUST00000106619 Plxnc1Q9QZC2 1574 aa27.07■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Card11Q8CIS0 1159 aa27.07■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Alpk3Q924C5 1678 aa27.07■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Itsn1Q9Z0R4 1714 aa27.05■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Sin3aQ60520 1274 aaKnown RBP27.04■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Ercc6l2Q9JIM3 1537 aa27.04■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Kif13aQ9EQW7 1749 aa27.03■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 PtprmP28828 1452 aa27.02■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Prrc2bQ7TPM1 1486 aaKnown RBP27.02■■□□□ 1.92
Ttc39a-203ENSMUST00000106619 Cwc22Q8C5N3 908 aaKnown RBP27■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Naip7Q9JIB3 1402 aa27■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Dip2bQ3UH60 1574 aa27■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Myo3aQ8K3H5 1613 aa27■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 AU022751B1B0V2 589 aa26.99■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Pcgf6Q99NA9 353 aa26.99■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Kdm5aQ3UXZ9 1690 aa26.98■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Ncoa1P70365 1447 aa26.98■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Kdm2aP59997 1161 aa26.97■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Myom1Q62234 1667 aaKnown RBP26.97■■□□□ 1.91
Ttc39a-203ENSMUST00000106619 Srpk2O54781 681 aaKnown RBP26.94■■□□□ 1.9
Ttc39a-203ENSMUST00000106619 Gm20521D3Z5F7 333 aa26.92■■□□□ 1.9
Ttc39a-203ENSMUST00000106619 Chd2E9PZM4 1827 aaKnown RBP26.91■■□□□ 1.9
Ttc39a-203ENSMUST00000106619 Cdk5rap2Q8K389 1822 aa26.91■■□□□ 1.9
Ttc39a-203ENSMUST00000106619 Os9Q8K2C7 672 aa26.89■■□□□ 1.9
Ttc39a-203ENSMUST00000106619 Rock2P70336 1388 aa26.88■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Slc52a2Q9D8F3 450 aa26.88■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Bcl9Q9D219 1425 aa26.88■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Fan1Q69ZT1 1020 aa26.87■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 4930407I10RikD3Z5T8 1512 aa26.87■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 MlecQ6ZQI3 291 aaKnown RBP26.85■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Zc3h13E9Q784 1729 aaKnown RBP26.85■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Gemin5Q8BX17 1502 aaKnown RBP26.84■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Stard8Q8K031 1019 aa26.83■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Setd1aE9PYH6 1716 aa26.83■■□□□ 1.89
Ttc39a-203ENSMUST00000106619 Puf60Q3UEB3 564 aaKnown RBP26.82■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 DnmbpQ6TXD4 1580 aa26.81■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Sipa1l1Q8C0T5 1782 aa26.81■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Nphp4P59240 1425 aa26.81■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 PplQ9R269 1755 aa26.8■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 MyclP10166 368 aa26.8■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Srcin1Q9QWI6 1250 aa26.8■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Pola1P33609 1465 aa26.8■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Arhgef28P97433 1693 aa26.8■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Eif2ak4Q9QZ05 1648 aa26.78■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Lrrc7Q80TE7 1490 aa26.77■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Plekhg5Q66T02 1073 aa26.76■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 Usp40Q8BWR4 1235 aa26.76■■□□□ 1.88
Ttc39a-203ENSMUST00000106619 MaddQ80U28 1577 aa26.74■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 PalldQ9ET54 1408 aa26.74■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Txndc2Q6P902 515 aa26.74■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Shq1Q7TMX5 569 aa26.74■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 P3h3Q8CG70 732 aa26.74■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Atp1b4Q99ME6 356 aa26.73■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Gtf2e1Q9D0D5 440 aa26.73■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Dip2aQ8BWT5 1523 aa26.71■■□□□ 1.87
Ttc39a-203ENSMUST00000106619 Mapk8ip2Q9ERE9 830 aa26.7■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Psme1P97371 249 aa26.69■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Zbtb4Q5F293 982 aa26.69■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Ift172Q6VH22 1749 aa26.68■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Topaz1E5FYH1 1653 aa26.68■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Itsn2Q9Z0R6 1659 aa26.68■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 Q9D9H8 365 aa26.67■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 GphnQ8BUV3 769 aaKnown RBP26.66■■□□□ 1.86
Ttc39a-203ENSMUST00000106619 IqubQ8CDK3 788 aa26.63■■□□□ 1.85
Ttc39a-203ENSMUST00000106619 Slit3Q9WVB4 1523 aa26.63■■□□□ 1.85
Ttc39a-203ENSMUST00000106619 Lmtk3Q5XJV6 1424 aa26.62■■□□□ 1.85
Ttc39a-203ENSMUST00000106619 Gm13695A2AK44 830 aa26.6■■□□□ 1.85
Ttc39a-203ENSMUST00000106619 Stag3O70576 1240 aa26.6■■□□□ 1.85
Ttc39a-203ENSMUST00000106619 Plekhg1F6S200 1446 aa26.58■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Sbno1Q689Z5 1390 aa26.57■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 IghaA0A0A6YXW6 389 aa26.56■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Stk26Q99JT2 416 aa26.56■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Asxl2Q8BZ32 1370 aa26.56■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Arid4bA2CG63 1314 aaKnown RBP26.55■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Cep170bQ80U49 1574 aa26.55■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 PzpQ61838 1495 aa26.54■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Tubgcp6G5E8P0 1769 aa26.53■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Utp14aQ640M1 767 aaKnown RBP26.52■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Slc24a1Q91WD8 1130 aa26.52■■□□□ 1.84
Ttc39a-203ENSMUST00000106619 Gm16486A0A1D5RMD1 1434 aa26.51■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Pik3r4Q8VD65 1358 aa26.5■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 CenpjQ569L8 1344 aa26.49■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Arap3Q8R5G7 1538 aa26.48■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Rimbp3Q3V0F0 1606 aa26.48■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Smg6P61406 1418 aaKnown RBP26.48■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 PrxO55103 1391 aa26.46■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Cps1Q8C196 1500 aa26.46■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Brwd3A2AHJ4 1799 aa26.46■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Scaf11E9PZM7 1456 aaKnown RBP26.46■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 InsrP15208 1372 aa26.46■■□□□ 1.83
Ttc39a-203ENSMUST00000106619 Abca14E9Q8F8 1683 aa26.42■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms