RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Ehbp1l1Q99MS7 1716 aa16.63■□□□□ 0.25
Actb-201ENSMUST00000100497 Slc4a2P13808 1237 aaKnown RBP16.62■□□□□ 0.25
Actb-201ENSMUST00000100497 Wwc2Q6NXJ0 1187 aa16.62■□□□□ 0.25
Actb-201ENSMUST00000100497 Itsn2Q9Z0R6 1659 aa16.62■□□□□ 0.25
Actb-201ENSMUST00000100497 1700123L14RikQ3V2K7 440 aa16.62■□□□□ 0.25
Actb-201ENSMUST00000100497 Tecpr2Q3UH45 1423 aa16.62■□□□□ 0.25
Actb-201ENSMUST00000100497 Trpm1Q2TV84 1622 aa16.61■□□□□ 0.25
Actb-201ENSMUST00000100497 Talpid3E9PV87 1520 aa16.61■□□□□ 0.25
Actb-201ENSMUST00000100497 Myom2Q14BI5 1463 aa16.6■□□□□ 0.25
Actb-201ENSMUST00000100497 Rsph4aQ8BYM7 716 aa16.59■□□□□ 0.25
Actb-201ENSMUST00000100497 Prdm2A2A7B5 1709 aaKnown RBP16.59■□□□□ 0.25
Actb-201ENSMUST00000100497 Adgrb3Q80ZF8 1522 aa16.59■□□□□ 0.25
Actb-201ENSMUST00000100497 Rims1Q99NE5 1463 aa16.59■□□□□ 0.25
Actb-201ENSMUST00000100497 Srcin1Q9QWI6 1250 aa16.58■□□□□ 0.25
Actb-201ENSMUST00000100497 RereQ80TZ9 1558 aa16.58■□□□□ 0.25
Actb-201ENSMUST00000100497 Adamts7Q68SA9 1657 aa16.58■□□□□ 0.24
Actb-201ENSMUST00000100497 Erich6D3Z6S9 713 aa16.57■□□□□ 0.24
Actb-201ENSMUST00000100497 Cul9Q80TT8 1865 aa16.57■□□□□ 0.24
Actb-201ENSMUST00000100497 Tmf1B9EKI3 1091 aa16.57■□□□□ 0.24
Actb-201ENSMUST00000100497 Uggt1Q6P5E4 1551 aa16.56■□□□□ 0.24
Actb-201ENSMUST00000100497 Slc24a1Q91WD8 1130 aa16.56■□□□□ 0.24
Actb-201ENSMUST00000100497 Dip2cE9PWR4 1557 aa16.56■□□□□ 0.24
Actb-201ENSMUST00000100497 Ino80Q6ZPV2 1559 aa16.56■□□□□ 0.24
Actb-201ENSMUST00000100497 Ptch1Q61115 1434 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 Calr4Q3TQS0 420 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 Plxnc1Q9QZC2 1574 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 Nphp4P59240 1425 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 Gm20521D3Z5F7 333 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 DnmbpQ6TXD4 1580 aa16.53■□□□□ 0.24
Actb-201ENSMUST00000100497 Cdk5rap2Q8K389 1822 aa16.52■□□□□ 0.24
Actb-201ENSMUST00000100497 Srpk2O54781 681 aaKnown RBP16.52■□□□□ 0.23
Actb-201ENSMUST00000100497 PrxO55103 1391 aa16.52■□□□□ 0.23
Actb-201ENSMUST00000100497 Sipa1l1Q8C0T5 1782 aa16.51■□□□□ 0.23
Actb-201ENSMUST00000100497 Zscan21Q07231 555 aa16.5■□□□□ 0.23
Actb-201ENSMUST00000100497 Upf2A2AT37 1269 aaKnown RBP16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 Os9Q8K2C7 672 aa16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 Gtf2e1Q9D0D5 440 aa16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 AatkQ80YE4 1365 aa16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 Cfap65Q3V0B4 1847 aa16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 Kdm5aQ3UXZ9 1690 aa16.49■□□□□ 0.23
Actb-201ENSMUST00000100497 Pank3Q8R2W9 370 aa16.48■□□□□ 0.23
Actb-201ENSMUST00000100497 Kdm2aP59997 1161 aa16.47■□□□□ 0.23
Actb-201ENSMUST00000100497 Zscan10Q3URR7 782 aa16.47■□□□□ 0.23
Actb-201ENSMUST00000100497 Gm16486A0A1D5RMD1 1434 aa16.47■□□□□ 0.23
Actb-201ENSMUST00000100497 Yeats2Q3TUF7 1407 aa16.47■□□□□ 0.23
Actb-201ENSMUST00000100497 Stk24Q99KH8 431 aa16.47■□□□□ 0.23
Actb-201ENSMUST00000100497 Knl1Q66JQ7 1612 aa16.46■□□□□ 0.23
Actb-201ENSMUST00000100497 Myo3aQ8K3H5 1613 aa16.46■□□□□ 0.23
Actb-201ENSMUST00000100497 Ofd1Q80Z25 1017 aa16.46■□□□□ 0.23
Actb-201ENSMUST00000100497 Slc52a2Q9D8F3 450 aa16.46■□□□□ 0.23
Actb-201ENSMUST00000100497 Qser1A2BIE1 1698 aa16.46■□□□□ 0.22
Actb-201ENSMUST00000100497 NpatQ8BMA5 1420 aa16.45■□□□□ 0.22
Actb-201ENSMUST00000100497 Tex14Q7M6U3 1450 aa16.45■□□□□ 0.22
Actb-201ENSMUST00000100497 Fam184bQ0KK56 942 aa16.45■□□□□ 0.22
Actb-201ENSMUST00000100497 Sall3Q62255 1320 aa16.43■□□□□ 0.22
Actb-201ENSMUST00000100497 Mroh1E0CZ22 1640 aa16.43■□□□□ 0.22
Actb-201ENSMUST00000100497 Anp32aO35381 247 aa16.43■□□□□ 0.22
Actb-201ENSMUST00000100497 Eif2ak4Q9QZ05 1648 aa16.42■□□□□ 0.22
Actb-201ENSMUST00000100497 Skint5A7XUY5 1461 aa16.42■□□□□ 0.22
Actb-201ENSMUST00000100497 Mak16Q8BGS0 296 aaKnown RBP16.42■□□□□ 0.22
Actb-201ENSMUST00000100497 Atf7ipQ7TT18 1306 aa16.42■□□□□ 0.22
Actb-201ENSMUST00000100497 Usp40Q8BWR4 1235 aa16.41■□□□□ 0.22
Actb-201ENSMUST00000100497 Inpp5dQ9ES52 1191 aa16.41■□□□□ 0.22
Actb-201ENSMUST00000100497 Ift172Q6VH22 1749 aa16.41■□□□□ 0.22
Actb-201ENSMUST00000100497 Rab3gap2Q8BMG7 1366 aa16.4■□□□□ 0.22
Actb-201ENSMUST00000100497 Rpgrip1lQ8CG73 1264 aa16.39■□□□□ 0.21
Actb-201ENSMUST00000100497 Slc4a1apE9PX68 744 aa16.39■□□□□ 0.21
Actb-201ENSMUST00000100497 Dnajc5gQ8C632 165 aa16.39■□□□□ 0.21
Actb-201ENSMUST00000100497 MaddQ80U28 1577 aa16.39■□□□□ 0.21
Actb-201ENSMUST00000100497 Alpk3Q924C5 1678 aa16.39■□□□□ 0.21
Actb-201ENSMUST00000100497 PalldQ9ET54 1408 aa16.38■□□□□ 0.21
Actb-201ENSMUST00000100497 Fan1Q69ZT1 1020 aa16.37■□□□□ 0.21
Actb-201ENSMUST00000100497 Puf60Q3UEB3 564 aaKnown RBP16.37■□□□□ 0.21
Actb-201ENSMUST00000100497 Plppr3Q7TPB0 716 aa16.37■□□□□ 0.21
Actb-201ENSMUST00000100497 IqubQ8CDK3 788 aa16.37■□□□□ 0.21
Actb-201ENSMUST00000100497 Adamtsl3G3UXC7 1706 aa16.36■□□□□ 0.21
Actb-201ENSMUST00000100497 Eif5bQ05D44 1216 aaKnown RBP16.35■□□□□ 0.21
Actb-201ENSMUST00000100497 InsrP15208 1372 aa16.35■□□□□ 0.21
Actb-201ENSMUST00000100497 Gprasp1Q5U4C1 1347 aa16.35■□□□□ 0.21
Actb-201ENSMUST00000100497 Myom1Q62234 1667 aaKnown RBP16.34■□□□□ 0.21
Actb-201ENSMUST00000100497 KdrP35918 1367 aa16.34■□□□□ 0.21
Actb-201ENSMUST00000100497 Lrrc7Q80TE7 1490 aa16.33■□□□□ 0.2
Actb-201ENSMUST00000100497 Hfm1D3Z4R1 1434 aa16.33■□□□□ 0.2
Actb-201ENSMUST00000100497 Zbtb4Q5F293 982 aa16.33■□□□□ 0.2
Actb-201ENSMUST00000100497 Kank1E9Q238 1360 aa16.32■□□□□ 0.2
Actb-201ENSMUST00000100497 Ahdc1Q6PAL7 1594 aaKnown RBP16.32■□□□□ 0.2
Actb-201ENSMUST00000100497 CenpjQ569L8 1344 aa16.32■□□□□ 0.2
Actb-201ENSMUST00000100497 Ppp2r1aQ76MZ3 589 aa16.31■□□□□ 0.2
Actb-201ENSMUST00000100497 SafbD3YXK2 937 aaKnown RBP16.29■□□□□ 0.2
Actb-201ENSMUST00000100497 Myt1Q8CFC2 1127 aa16.29■□□□□ 0.2
Actb-201ENSMUST00000100497 Stag3O70576 1240 aa16.28■□□□□ 0.2
Actb-201ENSMUST00000100497 Ttc41Q692V3 1318 aa16.28■□□□□ 0.2
Actb-201ENSMUST00000100497 Arhgap23Q69ZH9 1483 aa16.27■□□□□ 0.2
Actb-201ENSMUST00000100497 Wdr43Q6ZQL4 677 aaKnown RBP16.27■□□□□ 0.19
Actb-201ENSMUST00000100497 Mink1Q9JM52 1308 aa16.27■□□□□ 0.19
Actb-201ENSMUST00000100497 Q7TT23 1179 aa16.26■□□□□ 0.19
Actb-201ENSMUST00000100497 AU022751B1B0V2 589 aa16.25■□□□□ 0.19
Actb-201ENSMUST00000100497 Kif7B7ZNG0 1348 aa16.25■□□□□ 0.19
Actb-201ENSMUST00000100497 Zc3h13E9Q784 1729 aaKnown RBP16.25■□□□□ 0.19
Actb-201ENSMUST00000100497 Prrc2bQ7TPM1 1486 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms