RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Znhit6Q3UFB2 460 aaKnown RBP17■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Smc3Q9CW03 1217 aaKnown RBP17■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Fam184bQ0KK56 942 aa17■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Zrsr2Q62377 462 aaKnown RBP17■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Dhx57Q6P5D3 1388 aaKnown RBP17■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Tceal9Q9DD24 104 aa16.99■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Ccnb3Q810T2 1396 aa16.99■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Cplx2P84086 134 aa16.99■□□□□ 0.31
Col3a1-201ENSMUST00000087883 A0A1L1SQF0 893 aa16.99■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Utp14aQ640M1 767 aaKnown RBP16.99■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Evc2Q8K1G2 1220 aa16.98■□□□□ 0.31
Col3a1-201ENSMUST00000087883 KarsQ99MN1 595 aaKnown RBP16.98■□□□□ 0.31
Col3a1-201ENSMUST00000087883 PogkQ80TC5 607 aa16.98■□□□□ 0.31
Col3a1-201ENSMUST00000087883 HdgfP51859 237 aaKnown RBP16.97■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Anp32eP97822 260 aaKnown RBP16.97■□□□□ 0.31
Col3a1-201ENSMUST00000087883 UacaQ8CGB3 1411 aa16.97■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Ddx11Q6AXC6 880 aa16.97■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Ccdc183A2AJB1 534 aa16.97■□□□□ 0.31
Col3a1-201ENSMUST00000087883 A0A0U1RNP2 1173 aa16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 EzrP26040 586 aaKnown RBP16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Cplx1P63040 134 aa16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Rnf214Q8BFU3 668 aaKnown RBP16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Prkrip1Q9CWV6 186 aaKnown RBP16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Q9D2X8 372 aa16.96■□□□□ 0.31
Col3a1-201ENSMUST00000087883 Zscan10Q3URR7 782 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Mad1l1Q9WTX8 717 aaKnown RBP16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Atl3Q91YH5 541 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rnf20Q5DTM8 973 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Usp40Q8BWR4 1235 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Fam13bQ8K2H3 851 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 FosbP13346 338 aa16.95■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rufy1Q8BIJ7 712 aa16.94■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Pank1Q8K4K6 548 aa16.94■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Hnrnpul1Q8VDM6 859 aaKnown RBP16.94■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Gpatch3Q8BIY1 525 aa16.94■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Ccdc30Q8BVF4 654 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Hook1Q8BIL5 728 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Cabp4Q8VHC5 271 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Ttll13A4Q9F6 804 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Dusp9Q7TNL7 452 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Nol12Q8BG17 217 aa16.93■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Dapk1Q80YE7 1442 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Gcom1E9PZ54 550 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Hmox1P14901 289 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Kif3aP28741 701 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 MyzapQ3UIJ9 466 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Wdr78E9PYY5 807 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Ap3b2Q9JME5 1082 aa16.92■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Sart1Q9Z315 806 aaKnown RBP16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rapgef2Q8CHG7 1496 aa16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Ric3Q8BPM6 367 aa16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Smc4Q8CG47 1286 aa16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 NaspQ99MD9 773 aaKnown RBP16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rpgrip1lQ8CG73 1264 aa16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rbm10Q99KG3 930 aaKnown RBP16.91■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Pak3Q61036 559 aa16.9■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Nek4Q9Z1J2 792 aa16.9■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Odf2A3KGV1 830 aaKnown RBP16.9■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Rrp9Q91WM3 475 aaKnown RBP16.9■□□□□ 0.3
Col3a1-201ENSMUST00000087883 Usp16Q99LG0 825 aa16.88■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Cetn4Q8K4K1 168 aa16.88■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Ubxn4Q8VCH8 506 aa16.88■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Ccdc43Q9CR29 222 aaKnown RBP16.88■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Znf710Q3U288 666 aa16.87■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Carmil1Q6EDY6 1374 aa16.87■□□□□ 0.29
Col3a1-201ENSMUST00000087883 PhaxQ9JJT9 385 aaKnown RBP16.87■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Usp48Q3V0C5 1052 aa16.87■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Cwc15Q9JHS9 229 aaKnown RBP16.87■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Nectin2P32507 530 aa16.86■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Rab11fip3Q8CHD8 1047 aa16.86■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Nutm1Q8BHP2 1126 aa16.86■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Mns1Q61884 491 aa16.86■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Prm3Q62100 101 aa16.86■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Gprasp1Q5U4C1 1347 aa16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Tnpo1Q8BFY9 898 aaKnown RBP16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Mink1Q9JM52 1308 aa16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Ppp2r3aB2RXC8 1150 aa16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Cdkn1cP49919 348 aa16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Neurod6P48986 337 aa16.85■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Erc2Q6PH08 957 aa16.84■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Cchcr1Q8K2I2 770 aa16.84■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Cyp46a1Q9WVK8 500 aa16.84■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Rbm25B2RY56 838 aaKnown RBP16.83■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Shq1Q7TMX5 569 aa16.83■□□□□ 0.29
Col3a1-201ENSMUST00000087883 Ccp110Q7TSH4 1004 aa16.83■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Gnai1B2RSH2 354 aa16.83■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Gnai3Q9DC51 354 aa16.83■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Plekhh1Q80TI1 1356 aa16.83■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Rsph6aQ8CDR2 708 aa16.83■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Smarca4Q3TKT4 1613 aaKnown RBP16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Dhx16G3X8X0 1044 aaKnown RBP16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Ints3Q7TPD0 1041 aaKnown RBP16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Znf771Q8BJ90 317 aa16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Cfap99A0A140LIX9 648 aa16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Stk11ipQ3TAA7 1072 aa16.82■□□□□ 0.28
Col3a1-201ENSMUST00000087883 March6Q6ZQ89 909 aa16.81■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Ciz1Q8VEH2 845 aa16.81■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Cttnbp2B9EJA2 1648 aa16.81■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Ncbp3Q8BZR9 615 aaKnown RBP16.8■□□□□ 0.28
Col3a1-201ENSMUST00000087883 HmmrQ00547 794 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms