RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 A2mQ6GQT1 1474 aa12.18□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Kif27Q7M6Z4 1394 aa12.17□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Ccdc96Q9CR92 584 aa12.17□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Mindy4Q3UQI9 744 aa12.16□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Map7d2A2AG50 781 aa12.15□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Kcnj4P52189 445 aa12.15□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Gm7298A0A0N4SVU1 1476 aa12.15□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Ano8Q6PB70 1060 aa12.15□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Tmx3Q8BXZ1 456 aa12.15□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Ppp2r3aB2RXC8 1150 aa12.15□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Erich6D3Z6S9 713 aa12.15□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Pank2Q3U4S0 443 aa12.15□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Rsph3aQ3UFY4 516 aa12.15□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Kif16bB1AVY7 1312 aa12.14□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ylpm1Q9R0I7 1386 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ncbp3Q8BZR9 615 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Lmod3E9QA62 571 aa12.14□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Safb2Q80YR5 991 aaKnown RBP12.14□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Mphosph9A6H5Y1 991 aa12.13□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Pik3c2gO70167 1506 aa12.13□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Dync1i1O88485 628 aa12.12□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Sh3bp1P55194 680 aa12.12□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 IqubQ8CDK3 788 aa12.12□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Gripap1Q8VD04 806 aa12.12□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Glipr1l2Q9CQ35 332 aa12.12□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Mroh2bQ7M6Y6 1581 aa12.11□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Dapk1Q80YE7 1442 aa12.11□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Nfatc2ipO09130 412 aa12.11□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Inpp5bQ8K337 993 aa12.11□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ica1lQ3TY65 431 aa12.1□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Tbc1d31Q6NXY1 996 aa12.1□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 KarsQ99MN1 595 aaKnown RBP12.1□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Mug1P28665 1476 aa12.1□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ncbp1Q3UYV9 790 aaKnown RBP12.1□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Cpsf1Q9EPU4 1441 aaKnown RBP12.09□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ncapd2Q8K2Z4 1392 aa12.09□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Ube2uB1AUC4 352 aa12.09□□□□□ -0.47
Hmgb1-201ENSMUST00000085546 Tubgcp6G5E8P0 1769 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Brpf1B2RRD7 1212 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Q8BT18 775 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Kif2cQ922S8 721 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Rfx7F8VPJ6 1459 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 PtmaP26350 111 aa12.08□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Znf521Q6KAS7 1311 aa12.07□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Kif21aQ9QXL2 1672 aa12.07□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Zmynd15Q8C0R7 736 aa12.07□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Irx4Q9QY61 515 aa12.07□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Plch2A2AP18 1501 aa12.07□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Capn2O08529 700 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Rock1P70335 1354 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 OptnQ8K3K8 584 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Mug2P28666 1451 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Gapvd1Q6PAR5 1458 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Map7O88735 730 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Trap1aP19473 224 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Anp32cQ64G17 123 aa12.06□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Tex14Q7M6U3 1450 aa12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Sparcl1P70663 650 aa12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Fkbp15Q6P9Q6 1216 aaKnown RBP12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Ptgs1P22437 602 aa12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Tshz1Q5DTH5 1084 aa12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Lamc3Q9R0B6 1581 aa12.05□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 ImpactO55091 318 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Nectin2P32507 530 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Kif24Q6NWW5 1356 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Zscan25B2RX31 543 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Pkd2O35245 966 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 U2af2P26369 475 aaKnown RBP12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Dnajc2P54103 621 aaKnown RBP12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Kiaa1211Q5PR69 1207 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Nsfl1cQ9CZ44 370 aaKnown RBP12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Iqgap2Q3UQ44 1575 aa12.04□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Phlpp2Q8BXA7 1320 aa12.03□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Tspyl2Q7TQI8 677 aa12.03□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 RalgapbQ8BQZ4 1484 aa12.02□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Lmod2Q3UHZ5 550 aa12.02□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Mctp2Q5RJH2 878 aa12.02□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Slc20a2Q80UP8 656 aa12.02□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 Rcan3Q9JKK0 239 aa12.02□□□□□ -0.48
Hmgb1-201ENSMUST00000085546 NmiO35309 314 aa12.02□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Podxl2Q8CAE9 603 aa12.02□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 4931400O07RikQ9D4M5 137 aa12.02□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Gcc2Q8CHG3 1679 aa12.02□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Frmpd1A2AKB4 1549 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Speer4f2E9Q366 295 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Rlbp1Q9Z275 317 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Il16O54824 1322 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Mkrn3Q60764 544 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Phldb1Q6PDH0 1371 aaKnown RBP12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Soga1E1U8D0 1418 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Rundc1Q0VDN7 615 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Plin1Q8CGN5 517 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Apbb1Q9QXJ1 710 aa12.01□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Rbm25B2RY56 838 aaKnown RBP12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Mfap1aC0HKD8 439 aaKnown RBP12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Mfap1bC0HKD9 439 aaKnown RBP12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Cdkn1cP49919 348 aa12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Kdm4aQ8BW72 1064 aa12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Swt1Q9DBQ9 907 aa12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Lmtk2Q3TYD6 1471 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms