RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 Prdm16A2A935 1275 aa22.88■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Gm16486A0A1D5RMD1 1434 aa22.88■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Kdm2bQ6P1G2 1309 aa22.87■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Srcin1Q9QWI6 1250 aa22.87■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Cep170Q6A065 1588 aa22.87■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Tulp4Q9JIL5 1547 aa22.87■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Clasp1Q80TV8 1535 aaKnown RBP22.86■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 AI481877A2ALV5 1481 aa22.86■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Fam184bQ0KK56 942 aa22.85■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 B4galnt3Q6L8S8 986 aa22.85■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Rab3gap2Q8BMG7 1366 aa22.85■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 CanxP35564 591 aaKnown RBP22.84■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Kcnn1Q9EQR3 537 aa22.84■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Abcc3B2RX12 1523 aa22.84■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Fgd6Q69ZL1 1399 aa22.84■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Atf7ipQ7TT18 1306 aa22.84■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Mre11Q61216 706 aa22.83■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Rwdd1Q9CQK7 243 aa22.83■■□□□ 1.25
Col4a3bp-201ENSMUST00000077672 Hecw1Q8K4P8 1604 aa22.82■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Cdc42bpbQ7TT50 1713 aa22.82■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Map3k5O35099 1380 aa22.81■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Plekhh1Q80TI1 1356 aa22.81■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Kdm2aP59997 1161 aa22.8■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Sart3Q9JLI8 962 aaKnown RBP22.8■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Pdcl3Q8BVF2 240 aa22.79■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Nsd2Q8BVE8 1365 aa22.79■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Pola1P33609 1465 aa22.79■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Gm14025A2AP89 1413 aa22.79■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Pdlim2Q8R1G6 349 aa22.79■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 EspnQ9ET47 871 aa22.78■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Dbr1Q923B1 550 aa22.77■■□□□ 1.24
Col4a3bp-201ENSMUST00000077672 Erich6D3Z6S9 713 aa22.76■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Sall3Q62255 1320 aa22.75■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Dnai1Q8C0M8 701 aa22.75■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Abcc6Q9R1S7 1498 aa22.75■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Usp54Q8BL06 1588 aaKnown RBP22.74■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Speer4f1Q9D5Q6 258 aa22.73■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 ShprhQ7TPQ3 1674 aa22.73■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Chmp5Q9D7S9 219 aa22.73■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Apbb1Q9QXJ1 710 aa22.73■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 NhsB1AV60 1647 aa22.72■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 AnkarA2RT91 1465 aa22.72■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Zmym3Q9JLM4 1370 aa22.72■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Kiaa1210E9Q0C6 1637 aa22.71■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Kif7B7ZNG0 1348 aa22.71■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Usp19Q3UJD6 1360 aa22.7■■□□□ 1.23
Col4a3bp-201ENSMUST00000077672 Ccdc30Q8BVF4 654 aa22.7■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Smc5Q8CG46 1101 aaKnown RBP22.7■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Kif1bQ60575 1816 aaKnown RBP22.7■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Col17a1Q07563 1470 aa22.7■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Ppm1gQ61074 542 aa22.7■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 NudcO35685 332 aaKnown RBP22.69■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Uggt2E9Q4X2 1504 aa22.68■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Neurod2Q62414 383 aa22.67■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Gm20521D3Z5F7 333 aa22.66■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Gtf2a1Q99PM3 378 aa22.66■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Atp10dQ8K2X1 1416 aa22.66■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Os9Q8K2C7 672 aa22.66■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Nlrp6Q91WS2 869 aa22.65■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Ylpm1Q9R0I7 1386 aaKnown RBP22.64■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Gtf2e1Q9D0D5 440 aa22.64■■□□□ 1.22
Col4a3bp-201ENSMUST00000077672 Abcc1O35379 1528 aa22.64■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Dcaf11Q91VU6 549 aa22.64■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Itsn2Q9Z0R6 1659 aa22.63■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Abca8bQ8K440 1620 aa22.63■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Abca17E9PX95 1733 aa22.63■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Mapk8ip3Q9ESN9 1337 aa22.61■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 AU015836B2RUM3 263 aa22.61■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Kidins220E9Q9B7 1793 aa22.61■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Usp40Q8BWR4 1235 aa22.6■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Tspyl2Q7TQI8 677 aa22.59■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Golga2Q921M4 999 aa22.59■■□□□ 1.21
Col4a3bp-201ENSMUST00000077672 Kiaa1107Q80TK0 1369 aa22.58■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Xrn1P97789 1719 aaKnown RBP22.57■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Uspl1Q3ULM6 1089 aa22.57■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Kif3bQ61771 747 aa22.57■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Stard8Q8K031 1019 aa22.57■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Kdm5aQ3UXZ9 1690 aa22.57■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Gas2l2Q5SSG4 860 aa22.56■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Fan1Q69ZT1 1020 aa22.56■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Ralbp1Q62172 648 aa22.55■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Ttc21bQ0HA38 1315 aa22.55■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Stk24Q99KH8 431 aa22.55■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Srpk2O54781 681 aaKnown RBP22.54■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 ErbinQ80TH2 1402 aa22.54■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Gprasp1Q5U4C1 1347 aa22.53■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Nphp4P59240 1425 aa22.53■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Cep152A2AUM9 1736 aaKnown RBP22.52■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Znf608Q56A10 1511 aa22.52■■□□□ 1.2
Col4a3bp-201ENSMUST00000077672 Rrp9Q91WM3 475 aaKnown RBP22.51■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Myo3aQ8K3H5 1613 aa22.51■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Ak7Q9D2H2 614 aa22.51■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Pank1Q8K4K6 548 aa22.5■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Znf521Q6KAS7 1311 aa22.5■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Myo5cE9Q1F5 1742 aa22.5■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Ipo8Q7TMY7 1010 aa22.5■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Tmc1Q8R4P5 757 aa22.5■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Trim30dE9PWL0 497 aa22.49■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Eif2s2Q99L45 331 aaKnown RBP22.49■■□□□ 1.19
Col4a3bp-201ENSMUST00000077672 Prdm10Q3UTQ7 1184 aa22.48■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms