RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Abca17E9PX95 1733 aa15.3■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Sall3Q62255 1320 aa15.3■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Ppip5k1A2ARP1 1436 aa15.28■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Kcnn1Q9EQR3 537 aa15.28■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Kdm2aP59997 1161 aa15.28■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Chrna2Q91X60 512 aa15.28■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Rock2P70336 1388 aa15.27■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Adamts13Q769J6 1426 aa15.27■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Nos1Q9Z0J4 1429 aa15.26■□□□□ 0.03
Ddx55-201ENSMUST00000071057 PnisrA2AJT4 805 aaKnown RBP15.26■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Stk24Q99KH8 431 aa15.24■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Myo5cE9Q1F5 1742 aa15.24■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Ylpm1Q9R0I7 1386 aaKnown RBP15.24■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Tulp4Q9JIL5 1547 aa15.23■□□□□ 0.03
Ddx55-201ENSMUST00000071057 DekQ7TNV0 380 aaKnown RBP15.23■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Os9Q8K2C7 672 aa15.23■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Ttc21bQ0HA38 1315 aa15.21■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Ccdc9Q8VC31 543 aaKnown RBP15.21■□□□□ 0.03
Ddx55-201ENSMUST00000071057 Abcc6Q9R1S7 1498 aa15.21■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Irx6Q9ER75 438 aa15.2■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Znf518aB2RRF6 1478 aaKnown RBP15.2■□□□□ 0.02
Ddx55-201ENSMUST00000071057 OvosQ3UU35 1456 aa15.2■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Abca6Q8K441 1624 aa15.2■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Arid3aQ62431 601 aa15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Kdm5cP41230 1554 aa15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Ptch1Q61115 1434 aa15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Ak9G3UYQ4 1894 aa15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 P3h3Q8CG70 732 aa15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Clasp1Q80TV8 1535 aaKnown RBP15.19■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Calr4Q3TQS0 420 aa15.18■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Fndc1E9Q043 1732 aa15.17■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Dnttip2Q8R2M2 758 aaKnown RBP15.17■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Pank3Q8R2W9 370 aa15.17■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Srcin1Q9QWI6 1250 aa15.17■□□□□ 0.02
Ddx55-201ENSMUST00000071057 ErbinQ80TH2 1402 aa15.17■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Setd1aE9PYH6 1716 aa15.16■□□□□ 0.02
Ddx55-201ENSMUST00000071057 AnkarA2RT91 1465 aa15.16■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Inpp5dQ9ES52 1191 aa15.15■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Gm20521D3Z5F7 333 aa15.15■□□□□ 0.02
Ddx55-201ENSMUST00000071057 PrxO55103 1391 aa15.15■□□□□ 0.02
Ddx55-201ENSMUST00000071057 Rpgrip1lQ8CG73 1264 aa15.14■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Gli2Q0VGT2 1544 aa15.13■□□□□ 0.01
Ddx55-201ENSMUST00000071057 DmtnQ9WV69 405 aa15.13■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Prex1Q69ZK0 1650 aa15.13■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Uggt2E9Q4X2 1504 aa15.13■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Fan1Q69ZT1 1020 aa15.13■□□□□ 0.01
Ddx55-201ENSMUST00000071057 AcrbpQ3V140 540 aa15.12■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Ofd1Q80Z25 1017 aa15.12■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Iqgap3F8VQ29 1632 aa15.12■□□□□ 0.01
Ddx55-201ENSMUST00000071057 AdgbG3UZ78 1657 aa15.12■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Ttc37F8VPK0 1563 aa15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Tmem131lQ3U3D7 1597 aa15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Srpk2O54781 681 aaKnown RBP15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Tubgcp6G5E8P0 1769 aa15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Ythdc1E9Q5K9 736 aaKnown RBP15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Armcx1Q9CX83 456 aa15.11■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Znf692Q3U381 531 aa15.1■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Brd2Q7JJ13 798 aaKnown RBP15.1■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Q7TT23 1179 aa15.1■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Depdc5P61460 1591 aa15.09■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Atp10aO54827 1508 aa15.09■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Topbp1Q6ZQF0 1515 aa15.09■□□□□ 0.01
Ddx55-201ENSMUST00000071057 Zscan10Q3URR7 782 aa15.08■□□□□ 0.01
Ddx55-201ENSMUST00000071057 AatkQ80YE4 1365 aa15.08■□□□□ 0
Ddx55-201ENSMUST00000071057 Tmf1B9EKI3 1091 aa15.08■□□□□ 0
Ddx55-201ENSMUST00000071057 Usp40Q8BWR4 1235 aa15.07■□□□□ 0
Ddx55-201ENSMUST00000071057 Plch2A2AP18 1501 aa15.07■□□□□ 0
Ddx55-201ENSMUST00000071057 NeflP08551 543 aa15.07■□□□□ 0
Ddx55-201ENSMUST00000071057 Skap1Q3UUV5 355 aa15.07■□□□□ 0
Ddx55-201ENSMUST00000071057 Dip2cE9PWR4 1557 aa15.06■□□□□ 0
Ddx55-201ENSMUST00000071057 Myo3aQ8K3H5 1613 aa15.06■□□□□ 0
Ddx55-201ENSMUST00000071057 Gtf2e1Q9D0D5 440 aa15.06■□□□□ 0
Ddx55-201ENSMUST00000071057 Abca8aQ8K442 1620 aa15.05■□□□□ 0
Ddx55-201ENSMUST00000071057 AglF8VPN4 1532 aa15.05■□□□□ 0
Ddx55-201ENSMUST00000071057 Ppp1r18Q8BQ30 594 aa15.05■□□□□ 0
Ddx55-201ENSMUST00000071057 Zscan21Q07231 555 aa15.05■□□□□ -0
Ddx55-201ENSMUST00000071057 Chmp4bQ9D8B3 224 aaKnown RBP15.04■□□□□ -0
Ddx55-201ENSMUST00000071057 Nolc1E9Q5C9 702 aaKnown RBP15.04■□□□□ -0
Ddx55-201ENSMUST00000071057 RereQ80TZ9 1558 aa15.03■□□□□ -0
Ddx55-201ENSMUST00000071057 Cdc42bpgQ80UW5 1551 aa15.03■□□□□ -0
Ddx55-201ENSMUST00000071057 Yeats2Q3TUF7 1407 aa15.03■□□□□ -0
Ddx55-201ENSMUST00000071057 Fam184bQ0KK56 942 aa15.02■□□□□ -0
Ddx55-201ENSMUST00000071057 Prdm10Q3UTQ7 1184 aa15.02■□□□□ -0
Ddx55-201ENSMUST00000071057 Stard8Q8K031 1019 aa15.02■□□□□ -0
Ddx55-201ENSMUST00000071057 Adgrb3Q80ZF8 1522 aa15.02■□□□□ -0
Ddx55-201ENSMUST00000071057 Cep152A2AUM9 1736 aaKnown RBP15.02■□□□□ -0
Ddx55-201ENSMUST00000071057 Anp32aO35381 247 aa15.02□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Sbno1Q689Z5 1390 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Cfap65Q3V0B4 1847 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Pola1P33609 1465 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Kcna4Q61423 654 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Cul9Q80TT8 1865 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Rims1Q99NE5 1463 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Ehbp1l1Q99MS7 1716 aa15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Puf60Q3UEB3 564 aaKnown RBP15.01□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Zfp91Q62511 572 aa15□□□□□ -0.01
Ddx55-201ENSMUST00000071057 BbxQ8VBW5 907 aa15□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Gm16486A0A1D5RMD1 1434 aa14.99□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Sox12Q04890 314 aa14.99□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Rad21Q61550 635 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms