RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Gm21190A0A0G2JGJ6 266 aa15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Stk11ipQ3TAA7 1072 aa15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Hnrnpul1Q8VDM6 859 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Ccdc43Q9CR29 222 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Mad1l1Q9WTX8 717 aaKnown RBP15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Cplx1P63040 134 aa15.37■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Rec8Q8C5S7 591 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Ccnb3Q810T2 1396 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Dixdc1Q80Y83 711 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Rock1P70335 1354 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Mre11Q61216 706 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 PogkQ80TC5 607 aa15.36■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Hmox1P14901 289 aa15.35■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Usp16Q99LG0 825 aa15.35■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Pank1Q8K4K6 548 aa15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 KarsQ99MN1 595 aaKnown RBP15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Q9D2X8 372 aa15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Fmn1Q05860 1466 aa15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Smc4Q8CG47 1286 aa15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Gripap1Q8VD04 806 aa15.34■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Map7d2A2AG50 781 aa15.33■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Sytl4Q9R0Q1 673 aa15.33■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 KinQ8K339 391 aa15.33■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Fam184bQ0KK56 942 aa15.33■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Ric3Q8BPM6 367 aa15.33■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Kif4P33174 1231 aa15.33■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Cplx2P84086 134 aa15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Rnf214Q8BFU3 668 aaKnown RBP15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Ddx11Q6AXC6 880 aa15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Smc3Q9CW03 1217 aaKnown RBP15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Usp48Q3V0C5 1052 aa15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Chmp7Q8R1T1 451 aa15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Odf2A3KGV1 830 aaKnown RBP15.32■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Taf3Q5HZG4 932 aa15.31■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Srek1Q8BZX4 494 aaKnown RBP15.31■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Kdm5dQ62240 1548 aa15.31■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Stk3Q9JI10 497 aa15.31■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 CrcpO35427 148 aa15.3■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Q8C5K5 320 aa15.3■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Gtf2f1Q3THK3 508 aaKnown RBP15.3■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Rsph6aQ8CDR2 708 aa15.29■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Babam1Q3UI43 333 aa15.29■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Pnmal2G3X9N3 661 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Ipo7Q9EPL8 1038 aaKnown RBP15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 4933402E13RikQ9D4D2 429 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 March6Q6ZQ89 909 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Rpgrip1lQ8CG73 1264 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Stard8Q8K031 1019 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Cfdp1O88271 295 aaKnown RBP15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Zscan10Q3URR7 782 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 Abl1P00520 1123 aa15.28■□□□□ 0.04
Ccdc88c-201ENSMUST00000068411 PrkcshO08795 521 aa15.27■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Evc2Q8K1G2 1220 aa15.27■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Trim58Q5NCC9 485 aa15.27■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Nap1l1P28656 391 aaKnown RBP15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Rabep1O35551 862 aa15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Nek4Q9Z1J2 792 aa15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Rapgef2Q8CHG7 1496 aa15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Ccdc30Q8BVF4 654 aa15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Rnf20Q5DTM8 973 aa15.26■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Ccdc34Q3UI66 367 aa15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Dhx57Q6P5D3 1388 aaKnown RBP15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Eva1cP58659 440 aa15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Dapk1Q80YE7 1442 aa15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Hook1Q8BIL5 728 aa15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Glipr1l2Q9CQ35 332 aa15.25■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Cux2P70298 1426 aa15.24■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Gpatch3Q8BIY1 525 aa15.24■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Fyb1O35601 819 aa15.24■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Ralbp1Q62172 648 aa15.24■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Rbm25B2RY56 838 aaKnown RBP15.24■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Znhit6Q3UFB2 460 aaKnown RBP15.23■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Sycp1Q62209 993 aa15.23■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 MycnP03966 462 aaKnown RBP15.22■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Me1P06801 572 aa15.22■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Rufy1Q8BIJ7 712 aa15.22■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Plcd4Q8K3R3 807 aa15.22■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Tmc1Q8R4P5 757 aa15.21■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Mphosph10Q810V0 681 aaKnown RBP15.21■□□□□ 0.03
Ccdc88c-201ENSMUST00000068411 Kif16bB1AVY7 1312 aa15.21■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Sv2bQ8BG39 683 aa15.2■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 A0A1L1SQF0 893 aa15.2■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Gcom1E9PZ54 550 aa15.2■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 MyzapQ3UIJ9 466 aa15.2■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Kdm4aQ8BW72 1064 aa15.19■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Rad54l2Q99NG0 1466 aa15.19■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 PhaxQ9JJT9 385 aaKnown RBP15.19■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Fmnl2A2APV2 1086 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Erich4Q3UNU4 136 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Pknox2Q8BG99 474 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Ttll5Q8CHB8 1328 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Ccdc183A2AJB1 534 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Cyp46a1Q9WVK8 500 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Fam13bQ8K2H3 851 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Erc2Q6PH08 957 aa15.18■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Zrsr2Q62377 462 aaKnown RBP15.17■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Hmgn5Q9JL35 406 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Q7TT23 1179 aa15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Rbm10Q99KG3 930 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-201ENSMUST00000068411 Pds5bQ4VA53 1446 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms