RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Fhod3Q76LL6 1578 aa12.53□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Ppp2r1aQ76MZ3 589 aa12.52□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Setd1bQ8CFT2 1985 aa12.52□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Gapvd1Q6PAR5 1458 aa12.52□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Znf330Q922H9 316 aa12.52□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Gm6268A2A3U9 297 aa12.52□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Iqcf3Q9D498 203 aa12.52□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 IqubQ8CDK3 788 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Asxl1P59598 1514 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Cdc42bpaQ3UU96 1719 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 NudcO35685 332 aaKnown RBP12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Naip6Q9JIB6 1403 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Nsd2Q8BVE8 1365 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Ccdc30Q8BVF4 654 aa12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 U2af1Q9D883 239 aaKnown RBP12.51□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Pank1Q8K4K6 548 aa12.5□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Gtf3c3Q3TMP1 882 aa12.5□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Kif14L0N7N1 1674 aaKnown RBP12.5□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Pbrm1Q8BSQ9 1634 aaKnown RBP12.5□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Abcc1O35379 1528 aa12.5□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Supt6hQ62383 1726 aaKnown RBP12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Mroh2aD3Z750 1679 aa12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Ipo8Q7TMY7 1010 aa12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 RalgapbQ8BQZ4 1484 aa12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Atp10dQ8K2X1 1416 aa12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Ksr2Q3UVC0 959 aa12.49□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Erbb3Q61526 1339 aa12.48□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 DekQ7TNV0 380 aaKnown RBP12.48□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Ak7Q9D2H2 614 aa12.48□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 ErbinQ80TH2 1402 aa12.48□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Setbp1Q9Z180 1582 aa12.47□□□□□ -0.41
Pcdh1-201ENSMUST00000057185 Safb2Q80YR5 991 aaKnown RBP12.45□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Plin1Q8CGN5 517 aa12.45□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Mapk8ip3Q9ESN9 1337 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Tspyl2Q7TQI8 677 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Kank1E9Q238 1360 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Lrrc9Q8CDN9 1456 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Map3k4O08648 1597 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Plcb2A3KGF7 1181 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 AI481877A2ALV5 1481 aa12.44□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Puf60Q3UEB3 564 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 PtprgQ05909 1442 aa12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Mfap1aC0HKD8 439 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Mfap1bC0HKD9 439 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 MlecQ6ZQI3 291 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 DroshaQ5HZJ0 1373 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Htatsf1Q8BGC0 757 aa12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Plcd4Q8K3R3 807 aa12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Tmco5bQ80X59 307 aa12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Cpsf1Q9EPU4 1441 aaKnown RBP12.43□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 KarsQ99MN1 595 aaKnown RBP12.42□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Lamc1P02468 1607 aaKnown RBP12.41□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Rab3gap2Q8BMG7 1366 aa12.41□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Adgrl2Q8JZZ7 1487 aa12.41□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Plekhh1Q80TI1 1356 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Ttc21bQ0HA38 1315 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Apaf1O88879 1249 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Tsen2Q6P7W5 460 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Adgrl3Q80TS3 1537 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 1700019A02RikA0A087WPV9 146 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 Fmn2Q9JL04 1578 aa12.4□□□□□ -0.42
Pcdh1-201ENSMUST00000057185 MyclP10166 368 aa12.39□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 GsdmaQ9EST1 446 aa12.39□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Mbd5B1AYB6 1498 aa12.38□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Mre11Q61216 706 aa12.38□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Dnttip2Q8R2M2 758 aaKnown RBP12.38□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Ccdc183A2AJB1 534 aa12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Znf316Q6PGE4 1016 aa12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Mink1Q9JM52 1308 aa12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Stard8Q8K031 1019 aa12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Atxn3Q9CVD2 355 aa12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Dnmt1P13864 1620 aaKnown RBP12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Fam208aQ69ZR9 1610 aaKnown RBP12.37□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Ralbp1Q62172 648 aa12.36□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Shq1Q7TMX5 569 aa12.36□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Znf608Q56A10 1511 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Dot1lQ6XZL8 1540 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Igf1rQ60751 1373 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Birc3O08863 600 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 GorabQ8BRM2 368 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Tarbp1E9Q368 1579 aa12.35□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Trim58Q5NCC9 485 aa12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 U2surpQ6NV83 1029 aaKnown RBP12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Nutm1Q8BHP2 1126 aa12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Rrbp1Q99PL5 1605 aaKnown RBP12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Pcdh10E9PXQ7 1057 aa12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Irx6Q9ER75 438 aa12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 PtprtQ99M80 1454 aa12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Utp14aQ640M1 767 aaKnown RBP12.34□□□□□ -0.43
Pcdh1-201ENSMUST00000057185 Fgd1P52734 960 aa12.33□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Ccdc60Q8C4J0 545 aa12.33□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Ccar1Q8CH18 1146 aaKnown RBP12.33□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Cep170Q6A065 1588 aa12.33□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Ylpm1Q9R0I7 1386 aaKnown RBP12.32□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Gas2l2Q5SSG4 860 aa12.32□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Edc4Q3UJB9 1406 aaKnown RBP12.32□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Nectin2P32507 530 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 CenpjQ569L8 1344 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 Map7O88735 730 aa12.31□□□□□ -0.44
Pcdh1-201ENSMUST00000057185 NgefQ8CHT1 710 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms