RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Tceal9Q9DD24 104 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Homer1Q9Z2Y3 366 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 CrcpO35427 148 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Hmgn5Q9JL35 406 aa10.61□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Trim55G3X8Y1 545 aa10.6□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Ddx23D3Z0M9 819 aaKnown RBP10.6□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Txndc2Q6P902 515 aa10.6□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Glipr1l2Q9CQ35 332 aa10.6□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Smc4Q8CG47 1286 aa10.59□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Eea1Q8BL66 1411 aa10.59□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Trim29Q8R2Q0 587 aa10.59□□□□□ -0.71
Polr1a-201ENSMUST00000055296 Tmx4Q8C0L0 335 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Gripap1Q8VD04 806 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Pus7B7ZNL8 666 aaKnown RBP10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Kif4P33174 1231 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 ChgaP26339 463 aaKnown RBP10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Map3k7clP58500 142 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Cep112Q5PR68 954 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Gtf2e1Q9D0D5 440 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Chmp4cQ9D7F7 232 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Fam13bQ8K2H3 851 aa10.58□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Casq1O09165 405 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 ScribQ80U72 1612 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 UvssaQ9D479 717 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Nap1l2P51860 460 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Klf15Q9EPW2 415 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 KinQ8K339 391 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Ak7Q9D2H2 614 aa10.57□□□□□ -0.72
Polr1a-201ENSMUST00000055296 IkQ9Z1M8 557 aaKnown RBP10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Cc2d1aQ8K1A6 943 aa10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Mrvi1Q9WUX5 899 aaKnown RBP10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Trim30cD3YVI9 513 aa10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Ifit1bl1D3Z6F0 470 aa10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Sept6Q9R1T4 434 aa10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Cgnl1Q6AW69 1298 aa10.56□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Rfx1P48377 963 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Neurod6P48986 337 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Hs1bp3Q3TC93 395 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 CrbnQ8C7D2 445 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Psmd1Q3TXS7 953 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Dcaf11Q91VU6 549 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Kiaa0753Q6A000 959 aa10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Secisbp2lQ6A098 1086 aaKnown RBP10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Mad1l1Q9WTX8 717 aaKnown RBP10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Ssr1Q9CY50 286 aaKnown RBP10.55□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Q8C5K5 320 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Lrrcc1Q69ZB0 1026 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Eva1cP58659 440 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Sytl4Q9R0Q1 673 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Rbm25B2RY56 838 aaKnown RBP10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Me1P06801 572 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Rnf20Q5DTM8 973 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Skida1Q80YR3 822 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Lrrc45Q8CIM1 670 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Ap3b2Q9JME5 1082 aa10.54□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Phactr2B1AVP0 632 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 CenphQ9QYM8 241 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 BcanQ61361 883 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 4921530L21RikQ9CQ47 274 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 TxlnbQ8VBT1 685 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 SelenooQ9DBC0 667 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Cc2d2aQ8CFW7 1633 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Rundc1Q0VDN7 615 aa10.53□□□□□ -0.72
Polr1a-201ENSMUST00000055296 MycnP03966 462 aaKnown RBP10.52□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Rpap1Q80TE0 1409 aa10.52□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Ccdc181Q80ZU5 509 aa10.52□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Slc13a4Q8BZ82 625 aa10.52□□□□□ -0.72
Polr1a-201ENSMUST00000055296 StambpQ9CQ26 424 aa10.52□□□□□ -0.72
Polr1a-201ENSMUST00000055296 Abl1P00520 1123 aa10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Fmn1Q05860 1466 aa10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Kif3aP28741 701 aa10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 SlmapQ3URD3 845 aa10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Smc3Q9CW03 1217 aaKnown RBP10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Nol7Q9D7Z3 254 aaKnown RBP10.52□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Cetn4Q8K4K1 168 aa10.51□□□□□ -0.73
Polr1a-201ENSMUST00000055296 PhaxQ9JJT9 385 aaKnown RBP10.51□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Iqgap2Q3UQ44 1575 aa10.51□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Mipol1Q9D9F8 279 aa10.51□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Arglu1Q3UL36 271 aaKnown RBP10.51□□□□□ -0.73
Polr1a-201ENSMUST00000055296 ItpripQ3TNL8 555 aa10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 AdnpQ9Z103 1108 aaKnown RBP10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Tax1bp1Q3UKC1 814 aaKnown RBP10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Phldb1Q6PDH0 1371 aaKnown RBP10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Rabep1O35551 862 aa10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Zscan21Q07231 555 aa10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Ubxn4Q8VCH8 506 aa10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Kif7B7ZNG0 1348 aa10.5□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Ccdc173A0JLY1 547 aa10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Nf2P46662 596 aa10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Tmco3Q8BH01 678 aa10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 NefhP19246 1090 aa10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 SrrtQ99MR6 875 aaKnown RBP10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Sel1lQ9Z2G6 790 aa10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 EzrP26040 586 aaKnown RBP10.49□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Sept7O55131 436 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Lrrfip2Q91WK0 415 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Cux2P70298 1426 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Cfap99A0A140LIX9 648 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Erc1Q99MI1 1120 aa10.48□□□□□ -0.73
Polr1a-201ENSMUST00000055296 Skor2A7M7C7 1008 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms