RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Shroom2A2ALU4 1481 aa12□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Col17a1Q07563 1470 aa12□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 EspnQ9ET47 871 aa11.99□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Itsn2Q9Z0R6 1659 aa11.99□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Gm32742A0A1B0GT42 1604 aa11.99□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Erich6D3Z6S9 713 aa11.99□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Ak7Q9D2H2 614 aa11.99□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Sipa1l1Q8C0T5 1782 aa11.98□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Plekhh1Q80TI1 1356 aa11.98□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Znf608Q56A10 1511 aa11.98□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Mdc1Q5PSV9 1707 aa11.98□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Iqsec2Q5DU25 1478 aa11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Ssh2Q5SW75 1423 aa11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Grwd1Q810D6 446 aaKnown RBP11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Abca9Q8K449 1623 aa11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Kiaa1107Q80TK0 1369 aa11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Sbno1Q689Z5 1390 aa11.97□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 CrbnQ8C7D2 445 aa11.96□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Cdc42bpbQ7TT50 1713 aa11.96□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 Trappc8E9PWG2 1437 aa11.96□□□□□ -0.49
Ccdc171-201ENSMUST00000053414 4933416C03RikQ3V063 378 aa11.96□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Rrp9Q91WM3 475 aaKnown RBP11.96□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Atf7ipQ7TT18 1306 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Cdk5rap2Q8K389 1822 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Rad21Q61550 635 aaKnown RBP11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Chmp5Q9D7S9 219 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Zbtb4Q5F293 982 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Atp7aQ64430 1491 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Hecw1Q8K4P8 1604 aa11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Arid4bA2CG63 1314 aaKnown RBP11.95□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Prdm2A2A7B5 1709 aaKnown RBP11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Inpp5dQ9ES52 1191 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Kdm5aQ3UXZ9 1690 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 WrnO09053 1401 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Mast1Q9R1L5 1570 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Irf5P56477 497 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Pank3Q8R2W9 370 aa11.94□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Abcc1O35379 1528 aa11.93□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Rusc2Q80U22 1514 aa11.93□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Ccdc183A2AJB1 534 aa11.93□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Duxf3A0A0N4SV92 674 aa11.93□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Abca17E9PX95 1733 aa11.92□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Ppip5k1A2ARP1 1436 aa11.92□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Erbb4Q61527 1308 aa11.92□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Chrna2Q91X60 512 aa11.92□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Mrc2Q64449 1479 aa11.92□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Tdrd9Q14BI7 1383 aa11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Adgrl2Q8JZZ7 1487 aa11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Paxip1Q6NZQ4 1056 aa11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Ppp2r1aQ76MZ3 589 aa11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Phf14Q9D4H9 881 aa11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Dnmt1P13864 1620 aaKnown RBP11.91□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Mbd3Q9Z2D8 285 aaKnown RBP11.9□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Cc2d2bA0A286YDU8 1405 aa11.9□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 ShprhQ7TPQ3 1674 aa11.9□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Myom2Q14BI5 1463 aa11.9□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Kif20aP97329 887 aa11.9□□□□□ -0.5
Ccdc171-201ENSMUST00000053414 Catsper2A2ARP9 588 aa11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Edc4Q3UJB9 1406 aaKnown RBP11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Sptbn5F6UCX4 1208 aa11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Abca8aQ8K442 1620 aa11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Zfyve16Q80U44 1528 aa11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Nup160Q9Z0W3 1402 aaKnown RBP11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Zscan10Q3URR7 782 aa11.89□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Magi1Q6RHR9 1471 aa11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Uggt2E9Q4X2 1504 aa11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Gm6268A2A3U9 297 aa11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Nup155Q99P88 1391 aaKnown RBP11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ppm1gQ61074 542 aa11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ino80Q6ZPV2 1559 aa11.88□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Nsfl1cQ9CZ44 370 aaKnown RBP11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ripk4Q9ERK0 786 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 P2rx7Q9Z1M0 595 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Adgrl1Q80TR1 1466 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 ErbinQ80TH2 1402 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ipo8Q7TMY7 1010 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ppp1r3fQ9JIG4 799 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Hecw2Q6I6G8 1578 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Tbc1d32Q3URV1 1296 aa11.87□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Mlh3A0A1Y7VMP7 1443 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Tmem131lQ3U3D7 1597 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 NeflP08551 543 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Taok2Q6ZQ29 1240 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Clstn2Q9ER65 966 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Neurl4Q5NCX5 1563 aa11.86□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ttc37F8VPK0 1563 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 AU015836B2RUM3 263 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Mcm4P49717 862 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Pbrm1Q8BSQ9 1634 aaKnown RBP11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Tnpo1Q8BFY9 898 aaKnown RBP11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Xrn1P97789 1719 aaKnown RBP11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ift172Q6VH22 1749 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Trpm1Q2TV84 1622 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 PogkQ80TC5 607 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Rwdd1Q9CQK7 243 aa11.85□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Rab3gap2Q8BMG7 1366 aa11.84□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Apbb1Q9QXJ1 710 aa11.84□□□□□ -0.51
Ccdc171-201ENSMUST00000053414 Ehbp1l1Q99MS7 1716 aa11.83□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Ccdc30Q8BVF4 654 aa11.83□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Caskin1Q6P9K8 1431 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms