RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Tspyl2Q7TQI8 677 aa19.08■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Ccdc30Q8BVF4 654 aa19.08■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Atp7aQ64430 1491 aa19.07■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Lrrc9Q8CDN9 1456 aa19.07■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Slc4a1apE9PX68 744 aa19.07■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Sbno1Q689Z5 1390 aa19.07■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Neurod2Q62414 383 aa19.06■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Cd109Q8R422 1442 aa19.06■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Gm6268A2A3U9 297 aa19.05■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Gm16486A0A1D5RMD1 1434 aa19.04■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Ssh2Q5SW75 1423 aa19.04■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Adgrl2Q8JZZ7 1487 aa19.04■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 ArxO35085 564 aa19.03■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Fam184bQ0KK56 942 aa19.02■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Abcc2Q8VI47 1543 aa19.02■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Trappc8E9PWG2 1437 aa19.02■□□□□ 0.64
Ushbp1-201ENSMUST00000049184 Rrp7aQ9D1C9 280 aaKnown RBP19.02■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Mroh2aD3Z750 1679 aa19.01■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Dnttip2Q8R2M2 758 aaKnown RBP19.01■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Ppip5k1A2ARP1 1436 aa19■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Usp19Q3UJD6 1360 aa19■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Setd1bQ8CFT2 1985 aa19■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 4933402E13RikQ9D4D2 429 aa19■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Adamts13Q769J6 1426 aa19■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Nup160Q9Z0W3 1402 aaKnown RBP18.99■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Nlrp6Q91WS2 869 aa18.98■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Phf14Q9D4H9 881 aa18.98■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Sptbn5F6UCX4 1208 aa18.98■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Srcin1Q9QWI6 1250 aa18.98■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Pank1Q8K4K6 548 aa18.97■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Rrp9Q91WM3 475 aaKnown RBP18.97■□□□□ 0.63
Ushbp1-201ENSMUST00000049184 Spryd3E9Q9B3 442 aa18.95■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Golga2Q921M4 999 aa18.94■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Znf521Q6KAS7 1311 aa18.94■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Lrriq1Q0P5X1 1673 aa18.93■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Rlbp1Q9Z275 317 aa18.93■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Kif20aP97329 887 aa18.93■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Tnpo1Q8BFY9 898 aaKnown RBP18.93■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Kif7B7ZNG0 1348 aa18.93■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Ralbp1Q62172 648 aa18.92■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 KarsQ99MN1 595 aaKnown RBP18.92■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Ppp2r3aB2RXC8 1150 aa18.92■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Trim58Q5NCC9 485 aa18.92■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Gas2l2Q5SSG4 860 aa18.91■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Antxr1Q9CZ52 562 aa18.91■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Duxf3A0A0N4SV92 674 aa18.91■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Pbrm1Q8BSQ9 1634 aaKnown RBP18.91■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Rabep1O35551 862 aa18.9■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Col17a1Q07563 1470 aa18.9■□□□□ 0.62
Ushbp1-201ENSMUST00000049184 Armcx1Q9CX83 456 aa18.89■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 AampJ3QN89 436 aa18.89■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Uspl1Q3ULM6 1089 aa18.89■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Kdm2aP59997 1161 aa18.88■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Tbc1d32Q3URV1 1296 aa18.86■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Fkbp15Q6P9Q6 1216 aaKnown RBP18.86■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Pola1P33609 1465 aa18.86■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Fam208aQ69ZR9 1610 aaKnown RBP18.86■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Znf692Q3U381 531 aa18.86■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Edc4Q3UJB9 1406 aaKnown RBP18.85■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Tulp4Q9JIL5 1547 aa18.85■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Ylpm1Q9R0I7 1386 aaKnown RBP18.85■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Sart1Q9Z315 806 aaKnown RBP18.85■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Mast1Q9R1L5 1570 aa18.83■□□□□ 0.61
Ushbp1-201ENSMUST00000049184 Cep170Q6A065 1588 aa18.83■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Kiaa1107Q80TK0 1369 aa18.83■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Mcm4P49717 862 aa18.82■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Myom2Q14BI5 1463 aa18.81■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Pde4cQ3UEI1 686 aa18.81■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Rtn4Q99P72 1162 aaKnown RBP18.81■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Fancd2Q80V62 1450 aa18.8■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Spag9Q58A65 1321 aaKnown RBP18.8■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Arhgap5P97393 1501 aa18.8■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 DmtnQ9WV69 405 aa18.79■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Zcchc11B2RX14 1644 aaKnown RBP18.79■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Fam135bQ9DAI6 1403 aa18.79■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Atl3Q91YH5 541 aa18.79■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Paxip1Q6NZQ4 1056 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Ssh1Q76I79 1042 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Polr3glQ8R0C0 218 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 AnkarA2RT91 1465 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Catsper2A2ARP9 588 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Erich6D3Z6S9 713 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Map4k4P97820 1233 aaKnown RBP18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Os9Q8K2C7 672 aa18.78■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Neurl4Q5NCX5 1563 aa18.77■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Il4rP16382 810 aa18.77■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 AknaQ80VW7 1404 aa18.77■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Jph4Q80WT0 628 aa18.77■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Atxn3Q9CVD2 355 aa18.77■□□□□ 0.6
Ushbp1-201ENSMUST00000049184 Gm32742A0A1B0GT42 1604 aa18.77■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Pnmal2G3X9N3 661 aa18.76■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Robo2Q7TPD3 1470 aa18.76■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Mfap1aC0HKD8 439 aaKnown RBP18.75■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Mfap1bC0HKD9 439 aaKnown RBP18.75■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Gm20521D3Z5F7 333 aa18.75■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Gtf2e1Q9D0D5 440 aa18.75■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Kdm5aQ3UXZ9 1690 aa18.75■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Phlpp2Q8BXA7 1320 aa18.74■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Itsn2Q9Z0R6 1659 aa18.74■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Terf2O35144 541 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms