RNA–Protein interactions for RNA: ENSMUST00000048691.4

Ptchd4-201, Transcript of Patched domain-containing protein 4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptchd4, Length 6,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4-201ENSMUST00000048691 Stk3Q9JI10 497 aa12.12□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Gm21190A0A0G2JGJ6 266 aa12.12□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Usp16Q99LG0 825 aa12.12□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Dixdc1Q80Y83 711 aa12.11□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Sytl4Q9R0Q1 673 aa12.11□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Cspp1B2RX88 1205 aa12.11□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Q9D2X8 372 aa12.1□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Usp48Q3V0C5 1052 aa12.1□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Rock1P70335 1354 aa12.1□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Ric3Q8BPM6 367 aa12.1□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Kcnh8P59111 1102 aa12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Ccdc47Q9D024 483 aaKnown RBP12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Fmn1Q05860 1466 aa12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Mre11Q61216 706 aa12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Rsph6aQ8CDR2 708 aa12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 HdgfP51859 237 aaKnown RBP12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Ccp110Q7TSH4 1004 aa12.09□□□□□ -0.47
Ptchd4-201ENSMUST00000048691 Fam184bQ0KK56 942 aa12.08□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Kdm4aQ8BW72 1064 aa12.08□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Ccdc96Q9CR92 584 aa12.08□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Gtf2f1Q3THK3 508 aaKnown RBP12.07□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Rec8Q8C5S7 591 aa12.07□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Cgnl1Q6AW69 1298 aa12.07□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Abl1P00520 1123 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Nek4Q9Z1J2 792 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Cplx1P63040 134 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Zscan10Q3URR7 782 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Q7TT23 1179 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Q8C5K5 320 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Ccdc30Q8BVF4 654 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Gripap1Q8VD04 806 aa12.06□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Smc3Q9CW03 1217 aaKnown RBP12.05□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Pnmal2G3X9N3 661 aa12.05□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Ccdc43Q9CR29 222 aaKnown RBP12.05□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Dapk1Q80YE7 1442 aa12.05□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Kif4P33174 1231 aa12.05□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Rbm10Q99KG3 930 aaKnown RBP12.04□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Zfp644E9QA22 1323 aa12.04□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Tpm4Q6IRU2 248 aa12.04□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Cfdp1O88271 295 aaKnown RBP12.04□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Cux2P70298 1426 aa12.04□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 KinQ8K339 391 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Klf15Q9EPW2 415 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Ddx11Q6AXC6 880 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Paf1Q8K2T8 535 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Tpm1P58771 284 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Pknox2Q8BG99 474 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Rbm25B2RY56 838 aaKnown RBP12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Tmc1Q8R4P5 757 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Rad54l2Q99NG0 1466 aa12.03□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Chmp7Q8R1T1 451 aa12.02□□□□□ -0.48
Ptchd4-201ENSMUST00000048691 Rabep1O35551 862 aa12.02□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Tpm2P58774 284 aa12.02□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Trim58Q5NCC9 485 aa12.02□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Pip4k2bQ80XI4 416 aa12.02□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Bcl11bQ99PV8 884 aa12.01□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 CrcpO35427 148 aa12.01□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Taf3Q5HZG4 932 aa12.01□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Fam13bQ8K2H3 851 aa12.01□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Ttll13A4Q9F6 804 aa12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Erich4Q3UNU4 136 aa12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Q4VA45 678 aa12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Mphosph10Q810V0 681 aaKnown RBP12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Nap1l1P28656 391 aaKnown RBP12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Fmnl2A2APV2 1086 aa12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Apaf1O88879 1249 aa12□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Ccdc183A2AJB1 534 aa11.99□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 March6Q6ZQ89 909 aa11.99□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Tnpo1Q8BFY9 898 aaKnown RBP11.99□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Hook1Q8BIL5 728 aa11.99□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Eva1cP58659 440 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 AcrbpQ3V140 540 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Fyb1O35601 819 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Znf692Q3U381 531 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Smc4Q8CG47 1286 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 MpripP97434 1024 aa11.98□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Cplx2P84086 134 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Sv2bQ8BG39 683 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Frmd3Q8BHD4 595 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Map7d2A2AG50 781 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Srek1Q8BZX4 494 aaKnown RBP11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Ralbp1Q62172 648 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Sycp1Q62209 993 aa11.97□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Tdrd9Q14BI7 1383 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Cyp46a1Q9WVK8 500 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Me1P06801 572 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Themis2Q91YX0 663 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Kif16bB1AVY7 1312 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Odf2A3KGV1 830 aaKnown RBP11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Gpatch3Q8BIY1 525 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Gigyf1Q99MR1 1044 aaKnown RBP11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Q9D9H8 365 aa11.96□□□□□ -0.49
Ptchd4-201ENSMUST00000048691 Ttll5Q8CHB8 1328 aa11.96□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 WrnO09053 1401 aa11.96□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Cecr2E9Q2Z1 1453 aa11.95□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Rnf20Q5DTM8 973 aa11.95□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Fkbp4P30416 458 aa11.94□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Znhit6Q3UFB2 460 aaKnown RBP11.94□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Gm10471E9Q1C7 252 aa11.94□□□□□ -0.5
Ptchd4-201ENSMUST00000048691 Dhx57Q6P5D3 1388 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms