RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 CadpsQ80TJ1 1355 aa22.75■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Cgnl1Q6AW69 1298 aa22.74■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Eif2s2Q99L45 331 aaKnown RBP22.74■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Map3k1P53349 1493 aa22.74■■□□□ 1.23
Scaf11-201ENSMUST00000047835 FanciQ8K368 1330 aa22.73■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Smarce1O54941 411 aaKnown RBP22.73■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Dnai2A2AC93 623 aa22.72■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Ccdc30Q8BVF4 654 aa22.72■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Ylpm1Q9R0I7 1386 aaKnown RBP22.72■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Gsdma3Q5Y4Y6 464 aa22.72■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Smc4Q8CG47 1286 aa22.71■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Ric3Q8BPM6 367 aa22.71■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Gm10471E9Q1C7 252 aa22.71■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Q7TT23 1179 aa22.7■■□□□ 1.23
Scaf11-201ENSMUST00000047835 Nutm1Q8BHP2 1126 aa22.7■■□□□ 1.22
Scaf11-201ENSMUST00000047835 R3hcc1Q8BSI6 488 aa22.69■■□□□ 1.22
Scaf11-201ENSMUST00000047835 BicraF8VPZ9 1578 aa22.69■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Rbm25B2RY56 838 aaKnown RBP22.69■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Swt1Q9DBQ9 907 aa22.69■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Zpr1Q62384 459 aa22.68■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Fam163aQ8CAA5 168 aa22.68■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Gnai1B2RSH2 354 aa22.67■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Gnai3Q9DC51 354 aa22.67■■□□□ 1.22
Scaf11-201ENSMUST00000047835 PnisrA2AJT4 805 aaKnown RBP22.66■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Trim58Q5NCC9 485 aa22.66■■□□□ 1.22
Scaf11-201ENSMUST00000047835 MpripP97434 1024 aa22.65■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Crocc2F6XLV1 1638 aa22.65■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Pank1Q8K4K6 548 aa22.65■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Gm973E9Q295 1059 aa22.65■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Ncapd3Q6ZQK0 1506 aa22.65■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Myom3A2ABU4 1439 aa22.64■■□□□ 1.22
Scaf11-201ENSMUST00000047835 Tpm3-rs7D3Z2H9 248 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Mical1Q8VDP3 1048 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Camsap1A2AHC3 1581 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 BcanQ61361 883 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Ppp2r1aQ76MZ3 589 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Wdr62Q3U3T8 1523 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Tceal9Q9DD24 104 aa22.64■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Zranb3Q6NZP1 1069 aa22.63■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Cdk19Q8BWD8 501 aa22.63■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Neurod6P48986 337 aa22.63■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Tiam1Q60610 1591 aa22.62■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Neo1P97798 1493 aa22.61■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Cfdp1O88271 295 aaKnown RBP22.6■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Atp6v1dP57746 247 aa22.6■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Tomm22Q9CPQ3 142 aa22.6■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Adam1bQ8R534 806 aa22.59■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Apaf1O88879 1249 aa22.59■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Sv2bQ8BG39 683 aa22.59■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Ccer1Q9CQL2 403 aa22.59■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Il16O54824 1322 aa22.59■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Ddx54Q8K4L0 874 aaKnown RBP22.58■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Q8C5K5 320 aa22.58■■□□□ 1.21
Scaf11-201ENSMUST00000047835 Dhx16G3X8X0 1044 aaKnown RBP22.57■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Kif16bB1AVY7 1312 aa22.57■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Sf3b2Q3UJB0 878 aaKnown RBP22.57■■□□□ 1.2
Scaf11-201ENSMUST00000047835 TchhA0A0B4J1F9 1599 aa22.57■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Ccdc47Q9D024 483 aaKnown RBP22.57■■□□□ 1.2
Scaf11-201ENSMUST00000047835 A2mQ6GQT1 1474 aa22.56■■□□□ 1.2
Scaf11-201ENSMUST00000047835 HnrnpmQ9D0E1 729 aaKnown RBP22.56■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Dennd6aQ8BH65 605 aa22.54■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Mphosph10Q810V0 681 aaKnown RBP22.54■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Eva1cP58659 440 aa22.54■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Chmp4cQ9D7F7 232 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Tpd52l1O54818 204 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Gm21698A0A087WQP8 267 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Gm21671G3UY31 267 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Dnajc5bQ9CQ94 199 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 NexmifQ5DTT1 1515 aa22.53■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Rfx1P48377 963 aa22.52■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Cabp2Q9JLK4 216 aa22.52■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Mug1P28665 1476 aa22.52■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Hmox1P14901 289 aa22.52■■□□□ 1.2
Scaf11-201ENSMUST00000047835 Rab3gap2Q8BMG7 1366 aa22.52■■□□□ 1.19
Scaf11-201ENSMUST00000047835 HypkQ9CR41 129 aa22.51■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Vps53Q8CCB4 832 aa22.51■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Ak7Q9D2H2 614 aa22.51■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Slc4a2P13808 1237 aaKnown RBP22.51■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Filip1lQ6P6L0 1131 aa22.51■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Cald1E9QA15 768 aaKnown RBP22.5■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Top2bQ64511 1612 aa22.5■■□□□ 1.19
Scaf11-201ENSMUST00000047835 SynmQ70IV5 1561 aa22.5■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Magi1Q6RHR9 1471 aa22.49■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Cnnm1Q0GA42 951 aa22.49■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Fmnl2A2APV2 1086 aa22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Q9D2X8 372 aa22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Fkbp4P30416 458 aa22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 SlkO54988 1233 aa22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 NexnQ7TPW1 607 aa22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Smg7Q5RJH6 1138 aaKnown RBP22.48■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Phactr2B1AVP0 632 aa22.47■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Rsph3aQ3UFY4 516 aa22.47■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Ddx11Q6AXC6 880 aa22.47■■□□□ 1.19
Scaf11-201ENSMUST00000047835 St18Q80TY4 1045 aa22.47■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Irx3P81067 507 aa22.47■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Cavin4A2AMM0 362 aa22.46■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.46■■□□□ 1.19
Scaf11-201ENSMUST00000047835 Pcf11G3X9Z4 1553 aa22.45■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Grin2aP35436 1464 aa22.45■■□□□ 1.18
Scaf11-201ENSMUST00000047835 Igf1rQ60751 1373 aa22.45■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms